Published in Appl Environ Microbiol on November 01, 2005
Quantitative determination of free-DNA uptake in river bacteria at the single-cell level by in situ rolling-circle amplification. Appl Environ Microbiol (2006) 0.89
High-frequency phage-mediated gene transfer among Escherichia coli cells, determined at the single-cell level. Appl Environ Microbiol (2007) 0.81
Quantitative real-time PCR and fluorescence in situ hybridization approaches for enumerating Brevundimonas diminuta in drinking water. J Ind Microbiol Biotechnol (2010) 0.78
Transfer of a phage T4 gene into Enterobacteriaceae, determined at the single-cell level. Appl Environ Microbiol (2009) 0.76
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res (1997) 175.36
Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev (1995) 62.96
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol (1990) 34.40
Evolution in bacteria: evidence for a universal substitution rate in cellular genomes. J Mol Evol (1987) 9.84
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl Environ Microbiol (2002) 5.90
Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization. Appl Environ Microbiol (1996) 3.69
Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes. Microbiol Mol Biol Rev (1998) 2.96
Recent advances in the study of the taxonomy, pathogenicity, and infectious syndromes associated with the genus Aeromonas. Clin Microbiol Rev (1991) 2.87
Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes. Microbiology (2000) 2.73
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions. J Bacteriol (1996) 2.61
Polar localization of the replication origin and terminus in Escherichia coli nucleoids during chromosome partitioning. Genes Dev (1998) 2.55
Improved sensitivity of whole-cell hybridization by the combination of horseradish peroxidase-labeled oligonucleotides and tyramide signal amplification. Appl Environ Microbiol (1997) 2.31
Evolution and spread of antibiotic resistance. J Intern Med (2002) 1.97
Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea. Appl Environ Microbiol (2002) 1.96
In situ PCR for visualization of microscale distribution of specific genes and gene products in prokaryotic communities. Appl Environ Microbiol (1995) 1.85
Phylogenetic analysis of Pseudomonas syringae pathovars suggests the horizontal gene transfer of argK and the evolutionary stability of hrp gene cluster. J Mol Evol (1999) 1.76
Veterinary use and antibiotic resistance. Curr Opin Microbiol (2001) 1.66
Impact of an urban effluent on antibiotic resistance of riverine Enterobacteriaceae and Aeromonas spp. Appl Environ Microbiol (2000) 1.60
Monitoring impact of in situ biostimulation treatment on groundwater bacterial community by DGGE. FEMS Microbiol Ecol (2000) 1.51
Identification of DNA-synthesizing bacterial cells in coastal North Sea plankton. Appl Environ Microbiol (2002) 1.48
rRNA-targeted fluorescent in situ hybridization analysis of bacterial community structure in river water. Microbiology (1998) 1.32
Development and application of monoclonal antibodies for in situ detection of indigenous bacterial strains in aquatic ecosystems. Appl Environ Microbiol (1997) 1.32
Identification of bacterial cells by chromosomal painting. Appl Environ Microbiol (1997) 1.30
Distribution and life strategies of two bacterial populations in a eutrophic lake Appl Environ Microbiol (1998) 1.28
Detection of bacteria carrying the stx2 gene by in situ loop-mediated isothermal amplification. Appl Environ Microbiol (2003) 1.25
Development of a direct in situ PCR method for detection of specific bacteria in natural environments. Appl Environ Microbiol (1998) 1.20
Recognition of individual genes in a single bacterial cell by fluorescence in situ hybridization--RING-FISH. Mol Microbiol (2004) 1.08
Simultaneous direct counting of total and specific microbial cells in seawater, using a deep-sea microbe as target. Appl Environ Microbiol (2000) 1.02
Improved methods for in situ enzymatic amplification and detection of low copy number genes in bacteria. FEMS Microbiol Lett (1997) 0.98
Abundance and distribution of bacteria carrying sltII gene in natural river water. Lett Appl Microbiol (1999) 0.96
Flow cytometric detection of specific gene expression in prokaryotic cells using in situ RT-PCR. FEMS Microbiol Lett (2000) 0.92
Assessment of flhDC mRNA levels in Serratia liquefaciens swarm cells. J Bacteriol (2000) 0.92
Characterization of Aeromonas and Vibrio species isolated from a drinking water reservoir. J Appl Microbiol (2001) 0.89
Rapid chromosome identification by oligonucleotide-primed in situ DNA synthesis (PRINS). Hum Mol Genet (1994) 0.88
Physiological states of individual Salmonella typhimurium cells monitored by in situ reverse transcription-PCR. J Bacteriol (1999) 0.88
Monitoring of Ralstonia eutropha KT1 in groundwater in an experimental bioaugmentation field by in situ PCR. Appl Environ Microbiol (2002) 0.86
The effect of terrestrial effluents on the incidence of Aeromonas spp. in coastal waters. J Appl Bacteriol (1990) 0.85
Localization of single copy gene by PRINS technique. Nucleic Acids Res (1993) 0.85
Molecular typing of Aeromonas isolates in natural mineral waters. Appl Environ Microbiol (2003) 0.84
Repeated primed in situ labeling: formation and labeling of specific DNA sequences in chromosomes and nuclei. Cytogenet Cell Genet (1993) 0.82
Global dispersion of bacterial cells on Asian dust. Sci Rep (2012) 1.56
16S ribosomal DNA-based analysis of bacterial diversity in purified water used in pharmaceutical manufacturing processes by PCR and denaturing gradient gel electrophoresis. Appl Environ Microbiol (2002) 1.41
Bacterial activity and community composition in stream water and biofilm from an urban river determined by fluorescent in situ hybridization and DGGE analysis. FEMS Microbiol Ecol (2003) 1.33
Detection of bacteria carrying the stx2 gene by in situ loop-mediated isothermal amplification. Appl Environ Microbiol (2003) 1.25
A great leap forward in microbial ecology. Microbes Environ (2010) 1.06
Rapid quantification of bacterial cells in potable water using a simplified microfluidic device. J Microbiol Methods (2006) 1.02
Rapid and simple quantification of bacterial cells by using a microfluidic device. Appl Environ Microbiol (2005) 1.00
High-frequency phage-mediated gene transfer in freshwater environments determined at single-cell level. ISME J (2010) 0.99
Rapid and automated enumeration of viable bacteria in compost using a micro-colony auto counting system. J Microbiol Methods (2007) 0.98
Similarity of bacterial community structure between Asian dust and its sources determined by rRNA gene-targeted approaches. Microbes Environ (2010) 0.96
Genetic diversity of Mycobacterium avium subsp. hominissuis strains isolated from humans, pigs, and human living environment. Infect Genet Evol (2011) 0.95
Rapid, semiautomated quantification of bacterial cells in freshwater by using a microfluidic device for on-chip staining and counting. Appl Environ Microbiol (2010) 0.95
Development of an adhesive sheet for direct counting of bacteria on solid surfaces. J Microbiol Methods (2003) 0.92
High prevalence of qnr and aac(6')-Ib-cr genes in both water-borne environmental bacteria and clinical isolates of Citrobacter freundii in China. Microbes Environ (2012) 0.89
Quantitative determination of free-DNA uptake in river bacteria at the single-cell level by in situ rolling-circle amplification. Appl Environ Microbiol (2006) 0.89
Rapid detection of respiring Escherichia coli O157:H7 in apple juice, milk, and ground beef by flow cytometry. Cytometry A (2003) 0.89
Serotypes and extended-spectrum β-lactamase types of clinical isolates of Shigella spp. from the Zhejiang province of China. Diagn Microbiol Infect Dis (2011) 0.87
rRNA sequence-based scanning electron microscopic detection of bacteria. Appl Environ Microbiol (2005) 0.86
Monitoring of Ralstonia eutropha KT1 in groundwater in an experimental bioaugmentation field by in situ PCR. Appl Environ Microbiol (2002) 0.86
Soil microbial community structure in an Asian dust source region (Loess plateau). Microbes Environ (2010) 0.86
Microbial monitoring of crewed habitats in space-current status and future perspectives. Microbes Environ (2014) 0.86
Bacterial monitoring with adhesive sheet in the international space station-"Kibo", the Japanese experiment module. Microbes Environ (2013) 0.85
Visualization and enumeration of bacteria carrying a specific gene sequence by in situ rolling circle amplification. Appl Environ Microbiol (2005) 0.85
Changes in the airborne bacterial community in outdoor environments following Asian dust events. Microbes Environ (2014) 0.84
Rapid Detection of Starved Escherichia coli with Respiratory Activity in Potable Water by Signal-Amplified in situ Hybridization Following Formazan Reduction. Microbes Environ (2009) 0.83
Simplified sample preparation using frame spotting method for direct counting of total bacteria by fluorescence microscopy. J Microbiol Methods (2004) 0.82
Genotypic characterization and in vitro activities of tigecycline and polymyxin B for members of the Enterobacteriaceae with decreased susceptibility to carbapenems. J Med Microbiol (2011) 0.81
High-frequency phage-mediated gene transfer among Escherichia coli cells, determined at the single-cell level. Appl Environ Microbiol (2007) 0.81
Rapid enumeration of low numbers of moulds in tea based drinks using an automated system. Int J Food Microbiol (2011) 0.81
Degradation of carbendazim and 2,4-dichlorophenoxyacetic acid by immobilized consortium on loofa sponge. J Biosci Bioeng (2004) 0.80
Bacterial communities in pigmented biofilms formed on the sandstone bas-relief walls of the Bayon Temple, Angkor Thom, Cambodia. Microbes Environ (2013) 0.80
Bacterial population dynamics in a reverse-osmosis water purification system determined by fluorescent staining and PCR-denaturing gradient gel electrophoresis. Microbes Environ (2009) 0.80
Rapid and simple detection of food poisoning bacteria by bead assay with a microfluidic chip-based system. J Microbiol Methods (2006) 0.79
A ten years (2000-2009) surveillance of resistant Enterobacteriaceae in Zhejiang Province, China. Microb Ecol Health Dis (2012) 0.78
Enumeration of respiring Pseudomonas spp. in milk within 6 hours by fluorescence in situ hybridization following formazan reduction. Appl Environ Microbiol (2005) 0.78
Genetic and physiological characterization of the intestinal bacterial microbiota of Bluegill (Lepomis macrochirus) with three different feeding habits. Microb Ecol (2006) 0.78
Abundance and Community Structure of Bacteria on Asian Dust Particles Collected in Beijing, China, during the Asian Dust Season. Biol Pharm Bull (2016) 0.77
Rapid enumeration of active Legionella pneumophila in freshwater environments by the microcolony method combined with direct fluorescent antibody staining. Microbes Environ (2012) 0.77
Rapid enumeration of respiratory active mycobacteria with fluorescent double staining. J Microbiol Methods (2010) 0.77
Transfer of a phage T4 gene into Enterobacteriaceae, determined at the single-cell level. Appl Environ Microbiol (2009) 0.76
Rapid and sensitive detection of viable bacteria in contaminated platelet concentrates using a newly developed bioimaging system. Transfusion (2008) 0.76
16S ribosomal RNA gene-based phylogenetic analysis of abundant bacteria in river, canal and potable water in Bangkok, Thailand. Biol Pharm Bull (2013) 0.75
Risk Management of Teratogenic Drugs ～The Current States of Practice in Europe, US and Japan～. Yakugaku Zasshi (2015) 0.75
Simultaneous enumeration of viable Enterobacteriaceae and Pseudomonas spp. within three hours by multicolor fluorescence in situ hybridization with vital staining. J Microbiol Methods (2005) 0.75
Inactivation of bacteria in freshwater by momentary decompression following high pressurization. Microbes Environ (2011) 0.75
Premelting phenomena in ionic crystals. J Phys Condens Matter (2008) 0.75
Rapid monitoring of bacteria in dialysis fluids by fluorescent vital staining and microcolony methods. Nephrol Dial Transplant (2006) 0.75
Selective enumeration of viable Enterobacteriaceae and Pseudomonas spp. in milk within 7 h by multicolor fluorescence in situ hybridization following microcolony formation. J Biosci Bioeng (2012) 0.75
Expression of gyrB and 16S ribosomal RNA genes as indicators of growth and physiological activities of Legionella pneumophila. Biocontrol Sci (2015) 0.75
Application of real-time long and short polymerase chain reaction for sensitive monitoring of the fate of extracellular plasmid DNA introduced into river waters. Microbes Environ (2008) 0.75
[Direct visualization of bacteria with fluorescent staining methods]. Nihon Saikingaku Zasshi (2006) 0.75
A theory of transport properties in molten salts. J Chem Phys (2005) 0.75
Break down of asian dust particle on wet surface and their possibilities of cause of respiratory health effects. Biol Pharm Bull (2012) 0.75
Microchip-based terminal restriction fragment length polymorphism for on-site analysis of bacterial communities in freshwater. Biol Pharm Bull (2013) 0.75