Published in Aquat Toxicol on February 20, 2006
Appropriate 'housekeeping' genes for use in expression profiling the effects of environmental estrogens in fish. BMC Mol Biol (2007) 1.27
Construction of a robust microarray from a non-model species (largemouth bass) using pyrosequencing technology. J Fish Biol (2008) 1.17
Systematic evaluation of medium-throughput mRNA abundance platforms. RNA (2012) 1.15
Identification of a transcriptional fingerprint of estrogen exposure in rainbow trout liver. Toxicol Sci (2007) 0.96
Transcriptomic analyses of sexual dimorphism of the zebrafish liver and the effect of sex hormones. PLoS One (2013) 0.96
Fish 'n' chips: the use of microarrays for aquatic toxicology. Mol Biosyst (2006) 0.89
Sensitive and robust gene expression changes in fish exposed to estrogen--a microarray approach. BMC Genomics (2007) 0.89
Comparative oxygen radical formation and toxicity of BDE 47 in rainbow trout cell lines. Mar Environ Res (2008) 0.87
Temporal changes in gene expression in rainbow trout exposed to ethynyl estradiol. Comp Biochem Physiol C Toxicol Pharmacol (2006) 0.85
Contaminant-induced oxidative stress in fish: a mechanistic approach. Fish Physiol Biochem (2015) 0.79
Flow cytometric analysis of BDE 47 mediated injury to rainbow trout gill epithelial cells. Aquat Toxicol (2009) 0.79
Selection of reliable biomarkers from PCR array analyses using relative distance computational model: methodology and proof-of-concept study. PLoS One (2013) 0.79
Hepatic expression profiling in smolting and adult coho salmon (Onchorhynchus kisutch). Environ Res (2008) 0.79
Exploring androgen-regulated pathways in teleost fish using transcriptomics and proteomics. Integr Comp Biol (2012) 0.78
The role of biomarkers in the assessment of aquatic ecosystem health. Integr Environ Assess Manag (2014) 0.78
Dose-response relationships in gene expression profiles in rainbow trout, Oncorhyncus mykiss, exposed to ethynylestradiol. Mar Environ Res (2006) 0.78
BDE 49 and developmental toxicity in zebrafish. Comp Biochem Physiol C Toxicol Pharmacol (2011) 0.77
Adaptation of a Bioinformatics Microarray Analysis Workflow for a Toxicogenomic Study in Rainbow Trout. PLoS One (2015) 0.76
Basic local alignment search tool. J Mol Biol (1990) 659.07
Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A (1998) 192.97
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet (2001) 63.36
Parallel human genome analysis: microarray-based expression monitoring of 1000 genes. Proc Natl Acad Sci U S A (1996) 24.18
A vision for the future of genomics research. Nature (2003) 14.06
Exploring expression data: identification and analysis of coexpressed genes. Genome Res (1999) 5.09
The use and analysis of microarray data. Nat Rev Drug Discov (2002) 3.08
Development and application of a salmonid EST database and cDNA microarray: data mining and interspecific hybridization characteristics. Genome Res (2004) 2.72
Gene expression analysis reveals chemical-specific profiles. Toxicol Sci (2002) 2.50
Cells have distinct mechanisms to maintain protection against different reactive oxygen species: oxidative-stress-response genes. Proc Natl Acad Sci U S A (2004) 2.45
Computational methods for the identification of differential and coordinated gene expression. Hum Mol Genet (1999) 2.43
Developmental exposure to brominated diphenyl ethers results in thyroid hormone disruption. Toxicol Sci (2002) 2.42
Development of a toxicological gene array and quantitative assessment of this technology. Arch Biochem Biophys (2000) 2.13
Effects of short-term in vivo exposure to polybrominated diphenyl ethers on thyroid hormones and hepatic enzyme activities in weanling rats. Toxicol Sci (2001) 2.02
Prediction of compound signature using high density gene expression profiling. Toxicol Sci (2002) 1.82
Expression profiling of estrogenic compounds using a sheepshead minnow cDNA macroarray. EHP Toxicogenomics (2003) 1.78
Fish and chips: various methodologies demonstrate utility of a 16,006-gene salmonid microarray. BMC Genomics (2005) 1.75
Toxicogenomics and systems toxicology: aims and prospects. Nat Rev Genet (2004) 1.74
Analysing gene expression data from DNA microarrays to identify candidate genes. J Pathol (2001) 1.52
Differential expression of largemouth bass (Micropterus salmoides) estrogen receptor isotypes alpha, beta, and gamma by estradiol. Mol Cell Endocrinol (2004) 1.49
DNA fingerprinting confirms isogenicity of androgenetically derived rainbow trout lines. J Hered (1996) 1.48
Effects of the androgenic growth promoter 17-beta-trenbolone on fecundity and reproductive endocrinology of the fathead minnow. Environ Toxicol Chem (2003) 1.45
Microarray analysis of H2O2-, HNE-, or tBH-treated ARPE-19 cells. Free Radic Biol Med (2002) 1.32
A DNA expression array to detect toxic stress response in European flounder (Platichthys flesus). Aquat Toxicol (2003) 1.31
Discrimination of genotoxic from non-genotoxic carcinogens by gene expression profiling. Carcinogenesis (2004) 1.27
Ecotoxicogenomics: the challenge of integrating genomics into aquatic and terrestrial ecotoxicology. Aquat Toxicol (2004) 1.23
Applications of gene arrays in environmental toxicology: fingerprints of gene regulation associated with cadmium chloride, benzo(a)pyrene, and trichloroethylene. Environ Health Perspect (2001) 1.22
Toxicology and genetic toxicology in the new era of "toxicogenomics": impact of "-omics" technologies. Mutat Res (2002) 1.15
A comprehensive survey of the genes involved in maturation and development of the rainbow trout ovary. Biol Reprod (2004) 1.14
Microarray analyses identify molecular biomarkers of Atlantic salmon macrophage and hematopoietic kidney response to Piscirickettsia salmonis infection. Physiol Genomics (2004) 1.14
Response of rainbow trout transcriptome to model chemical contaminants. Biochem Biophys Res Commun (2004) 1.06
Two estrogen receptor (ER) isoforms with different estrogen dependencies are generated from the trout ER gene. Endocrinology (2000) 1.04
Oral exposure of PBDE-47 in fish: toxicokinetics and reproductive effects in Japanese Medaka (Oryzias latipes) and fathead minnows (Pimephales promelas). Environ Sci Technol (2006) 1.04
Ecotoxicogenomics: linkages between exposure and effects in assessing risks of aquatic contaminants to fish. Reprod Toxicol (2005) 1.01
Cloning and in vitro expression and characterization of the androgen receptor and isolation of estrogen receptor alpha from the fathead Minnow (Pimephales promelas). Environ Sci Technol (2004) 0.97
Dynamics of 17alpha-ethynylestradiol exposure in rainbow trout (Oncorhynchus mykiss): absorption, tissue distribution, and hepatic gene expression pattern. Environ Toxicol Chem (2006) 0.96
Feature extraction and signal processing for nylon DNA microarrays. BMC Genomics (2004) 0.95
Defining the molecular and cellular basis of toxicity using comparative models. Toxicol Appl Pharmacol (2002) 0.94
Dose-response relationships and pharmacokinetics of vitellogenin in rainbow trout after intravascular administration of 17alpha-ethynylestradiol. Aquat Toxicol (2001) 0.93
Genomic interrogation of mechanism(s) underlying cellular responses to toxicants. Toxicology (2002) 0.92
DNA microarrays and toxicogenomics: applications for ecotoxicology? Biotechnol Adv (2002) 0.92
2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) induces organ- specific differential gene expression in male Japanese medaka (Oryzias latipes). Toxicol Sci (2005) 0.90
Construction of a subtractive library from hexavalent chromium treated winter flounder (Pseudopleuronectes americanus) reveals alterations in non-selenium glutathione peroxidases. Aquat Toxicol (2004) 0.88
Discovery in toxicology: mediation by gene expression array technology. J Biochem Mol Toxicol (2001) 0.88
Chemical interference with genomic and nongenomic actions of steroids in fishes: role of receptor binding. Mar Environ Res (2001) 0.87
Use of suppressive subtractive hybridization and cDNA arrays to discover patterns of altered gene expression in the liver of dihydrotestosterone and 11-ketotestosterone exposed adult male largemouth bass (Micropterus salmoides). Mar Environ Res (2004) 0.84
Analysis of gene expression profiles in largemouth bass exposed to 17-beta-estradiol and to anthropogenic contaminants that behave as estrogens. Ecotoxicology (2003) 0.83
Trivalent chromium alters gene expression in the mummichog (Fundulus heteroclitus). Environ Toxicol Chem (2004) 0.83
Differential biomarker gene and protein expressions in nonylphenol and estradiol-17beta treated juvenile rainbow trout (Oncorhynchus mykiss). Comp Biochem Physiol C Toxicol Pharmacol (2001) 0.81
Gene expression fingerprints of largemouth bass (Micropterus salmoides) exposed to pulp and paper mill effluents. Mutat Res (2004) 0.81
Array technology as a tool to monitor exposure of fish to xenoestrogens. Mar Environ Res (2002) 0.80
Quantitative PCR analysis of CYP1A induction in Atlantic salmon (Salmo salar). Aquat Toxicol (2003) 0.78
Dietary exposure to 2,2',4,4'-tetrabromodiphenyl ether (PBDE-47) alters thyroid status and thyroid hormone-regulated gene transcription in the pituitary and brain. Environ Health Perspect (2008) 1.16
The inhibition of marine nitrification by ocean disposal of carbon dioxide. Mar Pollut Bull (2002) 1.12
Oral exposure of PBDE-47 in fish: toxicokinetics and reproductive effects in Japanese Medaka (Oryzias latipes) and fathead minnows (Pimephales promelas). Environ Sci Technol (2006) 1.04
Neural defects and cardiac arrhythmia in fish larvae following embryonic exposure to 2,2',4,4'-tetrabromodiphenyl ether (PBDE 47). Aquat Toxicol (2007) 1.00
Quantitative oligonucleotide microarray fingerprinting of Salmonella enterica isolates. Nucleic Acids Res (2004) 0.99
Assessing exposure in epidemiologic studies to disinfection by-products in drinking water: report from an international workshop. Environ Health Perspect (2002) 0.96
Dynamics of 17alpha-ethynylestradiol exposure in rainbow trout (Oncorhynchus mykiss): absorption, tissue distribution, and hepatic gene expression pattern. Environ Toxicol Chem (2006) 0.96
Reduced embryonic survival in rainbow trout resulting from paternal exposure to the environmental estrogen 17alpha-ethynylestradiol during late sexual maturation. Reproduction (2007) 0.89
Defining and modeling known adverse outcome pathways: Domoic acid and neuronal signaling as a case study. Environ Toxicol Chem (2011) 0.89
Low-dose pharmacokinetics and oral bioavailability of dichloroacetate in naive and GST-zeta-depleted rats. Environ Health Perspect (2002) 0.87
Temporal changes in gene expression in rainbow trout exposed to ethynyl estradiol. Comp Biochem Physiol C Toxicol Pharmacol (2006) 0.85
In vitro-in vivo extrapolation of quantitative hepatic biotransformation data for fish. I. A review of methods, and strategies for incorporating intrinsic clearance estimates into chemical kinetic models. Aquat Toxicol (2006) 0.84
Filter-feeding bivalves store and biodeposit colloidally stable gold nanoparticles. Environ Sci Technol (2011) 0.84
Gene expression profiles in rainbow trout, Onchorynchus mykiss, exposed to a simple chemical mixture. Toxicol Sci (2007) 0.82
Aneuploid sperm formation in rainbow trout exposed to the environmental estrogen 17{alpha}-ethynylestradiol. Proc Natl Acad Sci U S A (2008) 0.81
Uptake, tissue distribution and excretion of domoic acid after oral exposure in coho salmon (Oncorhynchus kisutch). Aquat Toxicol (2007) 0.81
Relationships between the transcriptome and physiological indicators of reproduction in female rainbow trout over an annual cycle. Environ Toxicol Chem (2011) 0.80
Toxicokinetics and oral bioavailability of halogenated acetic acids mixtures in naïve and GSTzeta-depleted rats. Toxicol Sci (2004) 0.80
High-throughput sequencing and pathway analysis reveal alteration of the pituitary transcriptome by 17α-ethynylestradiol (EE2) in female coho salmon, Oncorhynchus kisutch. Aquat Toxicol (2013) 0.79
Lack of a heritable reproductive defect in the offspring of male rainbow trout exposed to the environmental estrogen 17alpha-ethynylestradiol. Aquat Toxicol (2008) 0.78
A quantitative description of suicide inhibition of dichloroacetic acid in rats and mice. Toxicol Sci (2004) 0.78
Dose-response relationships in gene expression profiles in rainbow trout, Oncorhyncus mykiss, exposed to ethynylestradiol. Mar Environ Res (2006) 0.78
Modeling the brain-pituitary-gonad axis in salmon. Mar Environ Res (2006) 0.78
Estrogen receptor mRNA expression patterns in the liver and ovary of female rainbow trout over a complete reproductive cycle. Gen Comp Endocrinol (2012) 0.78
Toxicokinetic, toxicodynamic, and toxicoproteomic aspects of short-term exposure to trenbolone in female fish. Toxicol Sci (2013) 0.78
Uptake and retention of metallic nanoparticles in the Mediterranean mussel (Mytilus galloprovincialis). Aquat Toxicol (2013) 0.76
Sex differences in the uptake and disposition of perfluorooctanoic acid in fathead minnows after oral dosing. Environ Sci Technol (2010) 0.76
Physiologically based pharmacokinetic modeling of dibromoacetic acid in F344 rats. Toxicol Appl Pharmacol (2010) 0.75
Kinetics of trihalogenated acetic acid metabolism and isoform specificity in liver microsomes. Int J Toxicol (2011) 0.75