Published in Environ Microbiol on April 01, 2006
Pyrosequencing of the chaperonin-60 universal target as a tool for determining microbial community composition. Appl Environ Microbiol (2009) 1.53
Improvement of the representation of bifidobacteria in fecal microbiota metagenomic libraries by application of the cpn60 universal primer cocktail. Appl Environ Microbiol (2010) 1.51
The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data. PLoS One (2012) 1.50
Multiplex detection of bacteria associated with normal microbiota and with bacterial vaginosis in vaginal swabs by use of oligonucleotide-coupled fluorescent microspheres. J Clin Microbiol (2009) 1.16
Characterization of the vaginal microbiota of healthy Canadian women through the menstrual cycle. Microbiome (2014) 1.13
Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds. New Phytol (2014) 1.02
A molecular enrichment strategy based on cpn60 for detection of epsilon-proteobacteria in the dog fecal microbiome. Microb Ecol (2011) 1.00
Resolution and characterization of distinct cpn60-based subgroups of Gardnerella vaginalis in the vaginal microbiota. PLoS One (2012) 0.99
Characterization of the upper respiratory tract microbiomes of patients with pandemic H1N1 influenza. PLoS One (2013) 0.91
Novel and unexpected bacterial diversity in an arsenic-rich ecosystem revealed by culture-dependent approaches. Biol Direct (2012) 0.85
A Study of the Vaginal Microbiome in Healthy Canadian Women Utilizing cpn60-Based Molecular Profiling Reveals Distinct Gardnerella Subgroup Community State Types. PLoS One (2015) 0.84
A 'universal' type II chaperonin PCR detection system for the investigation of Archaea in complex microbial communities. ISME J (2011) 0.82
Molecular diagnostic tools for detection and differentiation of phytoplasmas based on chaperonin-60 reveal differences in host plant infection patterns. PLoS One (2014) 0.76
A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker. PLoS One (2016) 0.76
Brain microbiota disruption within inflammatory demyelinating lesions in multiple sclerosis. Sci Rep (2016) 0.76
Optimizing a PCR protocol for cpn60-based microbiome profiling of samples variously contaminated with host genomic DNA. BMC Res Notes (2015) 0.76
Laboratory-scale bioaugmentation relieves acetate accumulation and stimulates methane production in stalled anaerobic digesters. Appl Microbiol Biotechnol (2015) 0.75
cpnDB: a chaperonin sequence database. Genome Res (2004) 1.83
Biochemical analysis, cpn60 and 16S rDNA sequence data indicate that Streptococcus suis serotypes 32 and 34, isolated from pigs, are Streptococcus orisratti. Vet Microbiol (2005) 1.74
Identification of Campylobacter spp. and discrimination from Helicobacter and Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database. J Med Microbiol (2006) 1.50
The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data. PLoS One (2012) 1.50
Characterization of intestinal microbiota and response to dietary virginiamycin supplementation in the broiler chicken. Appl Environ Microbiol (2006) 1.35
Characterization of vaginal microflora of healthy, nonpregnant women by chaperonin-60 sequence-based methods. Am J Obstet Gynecol (2005) 1.28
Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target. J Microbiol Methods (2005) 1.24
Extensive profiling of a complex microbial community by high-throughput sequencing. Appl Environ Microbiol (2002) 1.23
Comparison of ileum microflora of pigs fed corn-, wheat-, or barley-based diets by chaperonin-60 sequencing and quantitative PCR. Appl Environ Microbiol (2005) 1.10
Pyrosequencing of chaperonin-60 (cpn60) amplicons as a means of determining microbial community composition. Methods Mol Biol (2011) 1.03
Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds. New Phytol (2014) 1.02
Modeling the structure of the type I peritrophic matrix: characterization of a Mamestra configurata intestinal mucin and a novel peritrophin containing 19 chitin binding domains. Insect Biochem Mol Biol (2004) 1.00
mPUMA: a computational approach to microbiota analysis by de novo assembly of operational taxonomic units based on protein-coding barcode sequences. Microbiome (2013) 1.00
Optimal conditions for the expression of a single-chain antibody (scFv) gene in Pichia pastoris. Protein Expr Purif (2003) 0.93
Structural and functional conservation of error-free DNA postreplication repair in Schizosaccharomyces pombe. DNA Repair (Amst) (2002) 0.89
A novel ELR-CXC chemokine antagonist reduces intestinal ischemia reperfusion-induced mortality, and local and remote organ injury. J Surg Res (2009) 0.89
Enhancing Escherichia coli electrotransformation competency by invoking physiological adaptations to stress and modifying membrane integrity. Anal Biochem (2003) 0.87
ELR-CXC chemokine receptor antagonism targets inflammatory responses at multiple levels. J Immunol (2009) 0.86
A new fluorescent quantitative PCR-based in vitro neutralization assay for white spot syndrome virus. J Virol Methods (2007) 0.84
Construction and characterization of a novel recombinant single-chain variable fragment antibody against White Spot Syndrome Virus from shrimp. J Immunol Methods (2003) 0.84
Molecular characterization of microbial communities in Canadian pulp and paper activated sludge and quantification of a novel Thiothrix eikelboomii-like bulking filament. Can J Microbiol (2006) 0.84
Essential role for Schizosaccharomyces pombe pik1 in septation. PLoS One (2009) 0.83
Blockade of neutrophil responses in aspiration pneumonia via ELR-CXC chemokine antagonism does not predispose to airway bacterial outgrowth. Pulm Pharmacol Ther (2009) 0.83
Identification of pathogenic Helicobacter species by chaperonin-60 differentiation on plastic DNA arrays. Genomics (2005) 0.82
Biological pretreatment with a cellobiose dehydrogenase-deficient strain of Trametes versicolor enhances the biofuel potential of canola straw. Bioresour Technol (2011) 0.80
Biochemical and taxonomic characterization of bacteria associated with the crucifer root maggot (Delia radicum). Can J Microbiol (2006) 0.79
Intracellular expression of recombinant antibody fluorescent protein fusions for localization of target antigens in Schizosaccharomyces pombe. Methods Mol Biol (2006) 0.77
Dissecting the domain structure of Cdc4p, a myosin essential light chain involved in Schizosaccharomyces pombe cytokinesis. Biochemistry (2005) 0.76
Multiplex detection of bacteria in complex clinical and environmental samples using oligonucleotide-coupled fluorescent microspheres. J Vis Exp (2011) 0.76
Humanized forms of the CXCR1/CXCR2 antagonist, bovine CXCL8((3-74))K11R/G31P, effectively block ELR-CXC chemokine activity and airway endotoxemia pathology. Int Immunopharmacol (2007) 0.75
Identification of a WSSV neutralizing scFv antibody by phage display technology and in vitro screening. Dis Aquat Organ (2006) 0.75
Novel recombinant monoclonal antibodies for vitellogenin assays in cyprinid fish species. Dis Aquat Organ (2010) 0.75