Published in Stat Appl Genet Mol Biol on May 06, 2004
Automated NMR Assignment and Protein Structure Determination using Sparse Dipolar Coupling Constraints. Prog Nucl Magn Reson Spectrosc (2009) 0.87
Contact replacement for NMR resonance assignment. Bioinformatics (2008) 0.86
Highly automated protein backbone resonance assignment within a few hours: the "BATCH" strategy and software package. J Biomol NMR (2009) 0.85
Inferential backbone assignment for sparse data. J Biomol NMR (2006) 0.80
Polyfunctional Fc-effector profiles mediated by IgG subclass selection distinguish RV144 and VAX003 vaccines. Sci Transl Med (2014) 1.87
Natural variation in Fc glycosylation of HIV-specific antibodies impacts antiviral activity. J Clin Invest (2013) 1.60
MMFPh: a maximal motif finder for phosphoproteomics datasets. Bioinformatics (2012) 1.44
Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing. Proteins (2006) 1.32
High-throughput, multiplexed IgG subclassing of antigen-specific antibodies from clinical samples. J Immunol Methods (2012) 1.12
The two-faced T cell epitope: examining the host-microbe interface with JanusMatrix. Hum Vaccin Immunother (2013) 1.11
Optimization algorithms for functional deimmunization of therapeutic proteins. BMC Bioinformatics (2010) 1.08
Graphical models of residue coupling in protein families. IEEE/ACM Trans Comput Biol Bioinform (2008) 1.07
Dual use of bladder anticholinergics and cholinesterase inhibitors: long-term functional and cognitive outcomes. J Am Geriatr Soc (2008) 1.07
Analysis of self-associating proteins by singular value decomposition of solution scattering data. Biophys J (2008) 1.05
Structure-guided deimmunization of therapeutic proteins. J Comput Biol (2013) 1.04
Rapid determination of multiple linear kinase substrate motifs by mass spectrometry. Chem Biol (2012) 1.01
Accounting for conformational entropy in predicting binding free energies of protein-protein interactions. Proteins (2011) 1.00
Divergent antibody subclass and specificity profiles but not protective HLA-B alleles are associated with variable antibody effector function among HIV-1 controllers. J Virol (2013) 0.98
Optimization of therapeutic proteins to delete T-cell epitopes while maintaining beneficial residue interactions. J Bioinform Comput Biol (2011) 0.98
Integrated assessment of predicted MHC binding and cross-conservation with self reveals patterns of viral camouflage. BMC Bioinformatics (2014) 0.97
Volume of home- and community-based Medicaid waiver services and risk of hospital admissions. J Am Geriatr Soc (2009) 0.96
Design and analysis of immune-evading enzymes for ADEPT therapy. Protein Eng Des Sel (2012) 0.95
A divide-and-conquer approach to determine the Pareto frontier for optimization of protein engineering experiments. Proteins (2011) 0.94
A complete algorithm to resolve ambiguity for intersubunit NOE assignment in structure determination of symmetric homo-oligomers. Protein Sci (2007) 0.92
Reconsidering complete search algorithms for protein backbone NMR assignment. Bioinformatics (2005) 0.92
A graphical method for analyzing distance restraints using residual dipolar couplings for structure determination of symmetric protein homo-oligomers. Protein Sci (2011) 0.92
Graphical models of protein-protein interaction specificity from correlated mutations and interaction data. Proteins (2009) 0.92
Structure-based redesign of proteins for minimal T-cell epitope content. J Comput Chem (2013) 0.92
Probabilistic cross-link analysis and experiment planning for high-throughput elucidation of protein structure. Protein Sci (2004) 0.90
Identification of antibody glycosylation structures that predict monoclonal antibody Fc-effector function. AIDS (2014) 0.88
Site-directed combinatorial construction of chimaeric genes: general method for optimizing assembly of gene fragments. Proteins (2006) 0.86
Characterizing the space of interatomic distance distribution functions consistent with solution scattering data. J Bioinform Comput Biol (2010) 0.86
Contact replacement for NMR resonance assignment. Bioinformatics (2008) 0.86
Optimization of combinatorial mutagenesis. J Comput Biol (2011) 0.85
Gene and protein sequence optimization for high-level production of fully active and aglycosylated lysostaphin in Pichia pastoris. Appl Environ Microbiol (2014) 0.85
Computationally driven deletion of broadly distributed T cell epitopes in a biotherapeutic candidate. Cell Mol Life Sci (2014) 0.85
Algorithms for joint optimization of stability and diversity in planning combinatorial libraries of chimeric proteins. J Comput Biol (2009) 0.84
Protein design by sampling an undirected graphical model of residue constraints. IEEE/ACM Trans Comput Biol Bioinform (2009) 0.84
A subgroup algorithm to identify cross-rotation peaks consistent with non-crystallographic symmetry. Acta Crystallogr D Biol Crystallogr (2004) 0.83
A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCs. J Comput Biol (2011) 0.83
Algorithms for selecting breakpoint locations to optimize diversity in protein engineering by site-directed protein recombination. Comput Syst Bioinformatics Conf (2007) 0.83
An efficient randomized algorithm for contact-based NMR backbone resonance assignment. Bioinformatics (2005) 0.83
Analysis of sequence-reactivity space for protein-protein interactions. Proteins (2005) 0.83
Hypergraph model of multi-residue interactions in proteins: sequentially-constrained partitioning algorithms for optimization of site-directed protein recombination. J Comput Biol (2007) 0.83
Robotic hierarchical mixing for the production of combinatorial libraries of proteins and small molecules. J Comb Chem (2007) 0.81
Inferential backbone assignment for sparse data. J Biomol NMR (2006) 0.80
Structure-based design of combinatorial mutagenesis libraries. Protein Sci (2015) 0.80
Optimizing Bayes error for protein structure model selection by stability mutagenesis. Comput Syst Bioinformatics Conf (2008) 0.79
Does implantation of sonomicrometry crystals alter regional cardiac muscle function? J Am Soc Echocardiogr (2007) 0.79
Immune camouflage: relevance to vaccines and human immunology. Hum Vaccin Immunother (2014) 0.79
Doppler strain imaging closely reflects myocardial energetic status in acute progressive ischemia and indicates energetic recovery after reperfusion. J Am Soc Echocardiogr (2008) 0.78
NMR structural inference of symmetric homo-oligomers. J Comput Biol (2011) 0.78
Functional evolution within a protein superfamily. Proteins (2006) 0.77
Planning combinatorial disulfide cross-links for protein fold determination. BMC Bioinformatics (2011) 0.77
Ballast: a ball-based algorithm for structural motifs. J Comput Biol (2013) 0.77
Protein fragment swapping: a method for asymmetric, selective site-directed recombination. J Comput Biol (2010) 0.77
Learning Sequence Determinants of Protein:protein Interaction Specificity with Sparse Graphical Models. Res Comput Mol Biol (2014) 0.76
Algorithms for optimizing cross-overs in DNA shuffling. BMC Bioinformatics (2012) 0.75
Bayesian reconstruction of P(r) directly from two-dimensional detector images via a Markov chain Monte Carlo method. J Appl Crystallogr (2013) 0.75
Corrigendum: Adjuvant-dependent innate and adaptive immune signatures of risk of SIVmac251 acquisition. Nat Med (2016) 0.75
THE INFLUENCE OF POST ACTIVATION POTENTIATION ON SHOT PUT PERFORMANCE OF COLLEGIATE THROWERS. J Strength Cond Res (2013) 0.75
An examination of preactivity and postactivity flexibility practices of National Collegiate Athletic Association Division I tennis coaches. J Strength Cond Res (2012) 0.75
An examination of the stretching practices of Division I and Division III college football programs in the midwestern United States. J Strength Cond Res (2009) 0.75