Application of minimal sequence quality values prevents misidentification of the blaSHV type in single bacterial isolates carrying different SHV extended-spectrum beta-lactamase genes.

PubWeight™: 0.87‹?›

🔗 View Article (PMC 1479194)

Published in J Clin Microbiol on May 01, 2006

Authors

Nashwan Al Naiemi1, Kim Schipper, Birgitta Duim, Aldert Bart

Author Affiliations

1: Department of Medical Microbiology, Academic Medical Center, L1-116, P.O. Box 22660, 1100 DD Amsterdam, The Netherlands.

Articles cited by this

Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res (1998) 106.16

A standard numbering scheme for the class A beta-lactamases. Biochem J (1991) 17.44

Extended-spectrum beta-lactamases in the 21st century: characterization, epidemiology, and detection of this important resistance threat. Clin Microbiol Rev (2001) 15.81

beta-Lactamases in laboratory and clinical resistance. Clin Microbiol Rev (1995) 12.53

The new beta-lactamases. N Engl J Med (2005) 5.12

Extended-spectrum beta-lactamases in Klebsiella pneumoniae bloodstream isolates from seven countries: dominance and widespread prevalence of SHV- and CTX-M-type beta-lactamases. Antimicrob Agents Chemother (2003) 3.92

Survey of Klebsiella pneumoniae strains producing extended-spectrum beta-lactamases: prevalence of SHV-12 and SHV-2a in Korea. J Clin Microbiol (1998) 2.66

Epidemiological typing of klebsiellae with extended-spectrum beta-lactamases from European intensive care units. J Antimicrob Chemother (1998) 2.51

Role of Ser-238 and Lys-240 in the hydrolysis of third-generation cephalosporins by SHV-type beta-lactamases probed by site-directed mutagenesis and three-dimensional modeling. J Biol Chem (1993) 2.37

Extended-spectrum beta-lactamases: implications for the clinical microbiology laboratory, therapy, and infection control. J Infect (2003) 2.05

Widespread transfer of resistance genes between bacterial species in an intensive care unit: implications for hospital epidemiology. J Clin Microbiol (2005) 1.60

Automated thermal cycling is superior to traditional methods for nucleotide sequencing of bla(SHV) genes. Antimicrob Agents Chemother (1999) 1.33

Molecular analysis of the simultaneous production of two SHV-type extended-spectrum beta-lactamases in a clinical isolate of Enterobacter cloacae by using single-nucleotide polymorphism genotyping. Antimicrob Agents Chemother (2005) 0.90

Occurrence and regional distribution of SHV-type extended-spectrum beta-lactamases in Hungary. Eur J Clin Microbiol Infect Dis (2005) 0.87

Articles by these authors

Molecular characterization of Campylobacter jejuni clones: a basis for epidemiologic investigation. Emerg Infect Dis (2002) 3.98

Comparative genotyping of Campylobacter jejuni by amplified fragment length polymorphism, multilocus sequence typing, and short repeat sequencing: strain diversity, host range, and recombination. J Clin Microbiol (2003) 3.97

Clonal spread of methicillin-resistant Staphylococcus pseudintermedius in Europe and North America: an international multicentre study. J Antimicrob Chemother (2010) 3.00

Selective probiotic bacteria induce IL-10-producing regulatory T cells in vitro by modulating dendritic cell function through dendritic cell-specific intercellular adhesion molecule 3-grabbing nonintegrin. J Allergy Clin Immunol (2005) 2.70

Generation of Campylobacter jejuni genetic diversity in vivo. Mol Microbiol (2002) 1.88

Livestock-associated methicillin-resistant Staphylococcus aureus in animals and humans. Int J Med Microbiol (2011) 1.85

The reach of the genome signature in prokaryotes. BMC Evol Biol (2006) 1.69

Widespread transfer of resistance genes between bacterial species in an intensive care unit: implications for hospital epidemiology. J Clin Microbiol (2005) 1.60

Emergence of multidrug-resistant Gram-negative bacteria during selective decontamination of the digestive tract on an intensive care unit. J Antimicrob Chemother (2006) 1.40

A CTX-M extended-spectrum beta-lactamase in Pseudomonas aeruginosa and Stenotrophomonas maltophilia. J Med Microbiol (2006) 1.23

Compositional discordance between prokaryotic plasmids and host chromosomes. BMC Genomics (2006) 1.20

Homonucleotide stretches in chromosomal DNA of Campylobacter jejuni display high frequency polymorphism as detected by direct PCR analysis. FEMS Microbiol Lett (2002) 1.15

Longitudinal study on methicillin-resistant Staphylococcus pseudintermedius in households. PLoS One (2011) 1.11

A Helicobacter pylori TolC efflux pump confers resistance to metronidazole. Antimicrob Agents Chemother (2005) 1.10

Differences in the population structure of invasive Streptococcus suis strains isolated from pigs and from humans in The Netherlands. PLoS One (2012) 1.10

Genotyping of Chlamydophila psittaci in human samples. Emerg Infect Dis (2006) 1.08

An outbreak of psittacosis due to Chlamydophila psittaci genotype A in a veterinary teaching hospital. J Med Microbiol (2006) 1.07

High prevalence of fecal carriage of extended spectrum β-lactamase/AmpC-producing Enterobacteriaceae in cats and dogs. Front Microbiol (2013) 1.06

Evaluation of four single-locus markers for Leishmania species discrimination by sequencing. J Clin Microbiol (2014) 1.05

Evaluation of a Chlamydophila psittaci infection diagnostic platform for zoonotic risk assessment. J Clin Microbiol (2007) 1.05

Complete Genome Sequence of Campylobacter fetus subsp. testudinum Strain 03-427T. Genome Announc (2013) 1.01

Strain variation within Campylobacter species in fecal samples from dogs and cats. Vet Microbiol (2008) 1.00

Methicillin-resistant coagulase-negative staphylococci on pig farms as a reservoir of heterogeneous staphylococcal cassette chromosome mec elements. Appl Environ Microbiol (2011) 0.98

Domain exchange at the 3' end of the gene encoding the fratricide meningococcal two-partner secretion protein A. BMC Genomics (2013) 0.96

Cutaneous leishmaniasis acquired in Jura, France. Emerg Infect Dis (2012) 0.96

Molecular detection of Plasmodium knowlesi in a Dutch traveler by real-time PCR. J Clin Microbiol (2012) 0.95

First cases of cutaneous leishmaniasis caused by Leishmania (Viannia) naiffi infection in Surinam. Am J Trop Med Hyg (2010) 0.95

Propidium monoazide does not fully inhibit the detection of dead Campylobacter on broiler chicken carcasses by qPCR. J Microbiol Methods (2013) 0.91

Livestock-associated MRSA ST398 carriage in pig slaughterhouse workers related to quantitative environmental exposure. Occup Environ Med (2012) 0.89

Molecular analysis of methicillin-resistant Staphylococcus pseudintermedius of feline origin from different European countries and North America. J Antimicrob Chemother (2010) 0.88

Cutaneous leishmaniasis (Leishmania major infection) in Dutch troops deployed in northern Afghanistan: epidemiology, clinical aspects, and treatment. Am J Trop Med Hyg (2010) 0.88

Evaluation of molecular assays for identification Campylobacter fetus species and subspecies and development of a C. fetus specific real-time PCR assay. J Microbiol Methods (2013) 0.88

Plasmid diversity in neisseriae. Infect Immun (2006) 0.87

First Closed Genome Sequence of Campylobacter fetus subsp. venerealis bv. intermedius. Genome Announc (2014) 0.84

The influence of antibodies on Staphylococcus epidermidis adherence to polyvinylpyrrolidone-coated silicone elastomer in experimental biomaterial-associated infection in mice. Biomaterials (2009) 0.83

Suspected horse-to-human transmission of MRSA ST398. Emerg Infect Dis (2011) 0.82

Helicobacter heilmannii gastritis caused by cat to child transmission. J Pediatr Gastroenterol Nutr (2003) 0.81

Complete Genome Sequence of Campylobacter iguaniorum Strain 1485ET, Isolated from a Bearded Dragon (Pogona vitticeps). Genome Announc (2014) 0.81

Staphylococcus epidermidis is cleared from biomaterial implants but persists in peri-implant tissue in mice despite rifampicin/vancomycin treatment. J Biomed Mater Res A (2008) 0.81

Phylogenetic validation of horizontal gene transfer? Nat Genet (2004) 0.81

Peri-implant tissue is an important niche for Staphylococcus epidermidis in experimental biomaterial-associated infection in mice. Infect Immun (2006) 0.81

In vitro antimicrobial activity of miconazole and polymyxin B against canine meticillin-resistant Staphylococcus aureus and meticillin-resistant Staphylococcus pseudintermedius isolates. Vet Dermatol (2012) 0.80

Variation in clinical presentation and genotype of causative Leishmania major strain in cutaneous leishmaniasis in north and south Afghanistan. Am J Trop Med Hyg (2011) 0.80

Identification of acquired DNA in Neisseria lactamica. FEMS Microbiol Lett (2006) 0.80

The potential of molecular diagnosis of cutaneous ectopic schistosomiasis. Am J Trop Med Hyg (2010) 0.78

An ex vivo porcine nasal mucosa explants model to study MRSA colonization. PLoS One (2013) 0.78

Echinococcus vogeli in immigrant from Suriname to the Netherlands. Emerg Infect Dis (2015) 0.77

Prevalence and clinical course in invasive infections with meningococcal endotoxin variants. PLoS One (2012) 0.77

Streptococcus pneumoniae arginine synthesis genes promote growth and virulence in pneumococcal meningitis. J Infect Dis (2013) 0.77

New England souvenirs. J Travel Med (2011) 0.76

Quantitative real-time polymerase chain reaction for detection of bacteria: wanted, dead or alive? Crit Care Med (2005) 0.75

Correction: Development of a real-time PCR for detection of Staphylococcus pseudintermedius using a novel automated comparison of whole-genome sequences. PLoS One (2017) 0.75

Multiplex-endonuclease genotyping approach (MEGA): a tool for the fine-scale detection of unlinked polymorphic DNA markers. Chromosoma (2003) 0.75