Stuart C Ray

Author PubWeight™ 97.78‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Immune evasion by hepatitis C virus NS3/4A protease-mediated cleavage of the Toll-like receptor 3 adaptor protein TRIF. Proc Natl Acad Sci U S A 2005 6.64
2 Residual human immunodeficiency virus type 1 viremia in some patients on antiretroviral therapy is dominated by a small number of invariant clones rarely found in circulating CD4+ T cells. J Virol 2006 5.41
3 Analysis of genetic linkage of HIV from couples enrolled in the HIV Prevention Trials Network 052 trial. J Infect Dis 2011 3.78
4 Genotypic analysis of HIV-1 drug resistance at the limit of detection: virus production without evolution in treated adults with undetectable HIV loads. J Infect Dis 2004 3.30
5 Prospective evaluation of community-acquired acute-phase hepatitis C virus infection. Clin Infect Dis 2005 3.06
6 Human immunodeficiency virus-related microbial translocation and progression of hepatitis C. Gastroenterology 2008 3.00
7 Neutralizing antibodies do not mediate suppression of human immunodeficiency virus type 1 in elite suppressors or selection of plasma virus variants in patients on highly active antiretroviral therapy. J Virol 2006 2.91
8 Cellular immune selection with hepatitis C virus persistence in humans. J Exp Med 2005 2.75
9 G-->A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4+ T cells in vivo. J Virol 2005 2.61
10 Needlestick transmission of hepatitis C. JAMA 2002 2.55
11 Comprehensive analyses of CD8+ T cell responses during longitudinal study of acute human hepatitis C. Hepatology 2005 2.52
12 Spontaneous control of primary hepatitis C virus infection and immunity against persistent reinfection. Gastroenterology 2009 2.24
13 Spontaneous clearance of primary acute hepatitis C virus infection correlated with high initial viral RNA level and rapid HVR1 evolution. Hepatology 2012 2.14
14 Humoral immune response in acute hepatitis C virus infection. Clin Infect Dis 2005 2.02
15 Early archiving and predominance of nonnucleoside reverse transcriptase inhibitor-resistant HIV-1 among recently infected infants born in the United States. J Infect Dis 2007 1.96
16 Identification of nevirapine-resistant HIV-1 in the latent reservoir after single-dose nevirapine to prevent mother-to-child transmission of HIV-1. J Infect Dis 2009 1.93
17 Cross-genotype immunity to hepatitis C virus. J Virol 2004 1.92
18 Selection pressure from neutralizing antibodies drives sequence evolution during acute infection with hepatitis C virus. Gastroenterology 2009 1.89
19 Persistence of wild-type virus and lack of temporal structure in the latent reservoir for human immunodeficiency virus type 1 in pediatric patients with extensive antiretroviral exposure. J Virol 2002 1.88
20 Continued production of drug-sensitive human immunodeficiency virus type 1 in children on combination antiretroviral therapy who have undetectable viral loads. J Virol 2004 1.85
21 High-programmed death-1 levels on hepatitis C virus-specific T cells during acute infection are associated with viral persistence and require preservation of cognate antigen during chronic infection. J Immunol 2008 1.79
22 Control of HIV-1 in elite suppressors despite ongoing replication and evolution in plasma virus. J Virol 2010 1.66
23 Transmission of human immunodeficiency virus type 1 from a patient who developed AIDS to an elite suppressor. J Virol 2008 1.66
24 Slow human immunodeficiency virus type 1 evolution in viral reservoirs in infants treated with effective antiretroviral therapy. AIDS Res Hum Retroviruses 2007 1.63
25 A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts. J Virol Methods 2006 1.49
26 Hepatitis C virus infection of neuroepithelioma cell lines. Gastroenterology 2010 1.35
27 Molecular epidemiology of HIV-1 subtypes in southern China. J Acquir Immune Defic Syndr 2005 1.33
28 A novel assay allows genotyping of the latent reservoir for human immunodeficiency virus type 1 in the resting CD4+ T cells of viremic patients. J Virol 2005 1.32
29 Clearance of hepatitis C infection is associated with the early appearance of broad neutralizing antibody responses. Hepatology 2014 1.29
30 CD4+ T cell depletion in an untreated HIV type 1-infected human leukocyte antigen-B*5801-positive patient with an undetectable viral load. Clin Infect Dis 2008 1.29
31 Hepatitis C virus immune escape via exploitation of a hole in the T cell repertoire. J Immunol 2008 1.28
32 Accurate representation of the hepatitis C virus quasispecies in 5.2-kilobase amplicons. J Clin Microbiol 2004 1.26
33 Use of laser capture microdissection to map hepatitis C virus-positive hepatocytes in human liver. Gastroenterology 2013 1.23
34 Analysis of HIV diversity using a high-resolution melting assay. AIDS Res Hum Retroviruses 2010 1.23
35 Analyses of HIV-1 drug-resistance profiles among infected adolescents experiencing delayed antiretroviral treatment switch after initial nonsuppressive highly active antiretroviral therapy. AIDS Patient Care STDS 2008 1.22
36 Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretroviral therapy. J Virol 2009 1.20
37 Acceleration of hepatitis C virus envelope evolution in humans is consistent with progressive humoral immune selection during the transition from acute to chronic infection. J Virol 2010 1.18
38 Evolution of the HIV-1 nef gene in HLA-B*57 positive elite suppressors. Retrovirology 2010 1.10
39 Comprehensive genetic and epigenetic analysis of occult hepatitis B from liver tissue samples. Clin Infect Dis 2008 1.04
40 Molecular epidemiology of HIV type 1 in Singapore and identification of novel CRF01_AE/B recombinant forms. AIDS Res Hum Retroviruses 2011 1.01
41 Kupffer cells are depleted with HIV immunodeficiency and partially recovered with antiretroviral immune reconstitution. AIDS 2009 1.00
42 Naturally selected hepatitis C virus polymorphisms confer broad neutralizing antibody resistance. J Clin Invest 2014 0.99
43 Maternal neutralizing antibody and transmission of hepatitis C virus to infants. J Infect Dis 2008 0.97
44 Characterization of novel recombinant HIV-1 genomes using the branching index. Virology 2003 0.97
45 Epidemiology of hepatitis C virus infection & liver disease among injection drug users (IDUs) in Chennai, India. Indian J Med Res 2010 0.96
46 Progression of fibrosis during chronic hepatitis C is associated with rapid virus evolution. J Virol 2007 0.94
47 Hepatitis C virus epitope exposure and neutralization by antibodies is affected by time and temperature. Virology 2011 0.92
48 Immunogenicity and cross-reactivity of a representative ancestral sequence in hepatitis C virus infection. J Immunol 2012 0.91
49 HIV-1 evolution following transmission to an HLA-B*5801-positive patient. J Infect Dis 2009 0.91
50 Laser captured hepatocytes show association of butyrylcholinesterase gene loss and fibrosis progression in hepatitis C-infected drug users. Hepatology 2012 0.89
51 High diversity of hepatitis C viral quasispecies is associated with early virological response in patients undergoing antiviral therapy. Hepatology 2009 0.89
52 Constraints on viral evolution during chronic hepatitis C virus infection arising from a common-source exposure. J Virol 2012 0.85
53 Computational reconstruction of Bole1a, a representative synthetic hepatitis C virus subtype 1a genome. J Virol 2012 0.85
54 The transhepatic endotoxin gradient is present despite liver cirrhosis and is attenuated after transjugular portosystemic shunt (TIPS). BMC Gastroenterol 2011 0.85
55 Genetic divergence of hepatitis C virus: the role of HIV-related immunosuppression. J Acquir Immune Defic Syndr 2008 0.85
56 Severe pruritus after completing pegylated interferon for hepatitis C. AIDS Read 2008 0.77
57 Genetic linkage of hepatitis B virus in peripheral blood leukocytes provides evidence for contamination. J Virol 2010 0.75
58 Antiretroviral therapy, interferon sensitivity, and virologic setpoint in human immunodeficiency virus/hepatitis C virus coinfected patients. Hepatology 2014 0.75
59 Intracellular HIV-1 rna and CD4+ t cell activation in patients starting antiretrovirals. AIDS 2017 0.75
60 Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance. JCI Insight 2017 0.75
61 Genomic Diversity of SARS-CoV-2 During Early Introduction into the United States National Capital Region. medRxiv 2020 0.75
62 Design of Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitors Using a Crystallographic Surrogate Derived from Checkpoint Kinase 1 (CHK1). J Med Chem 2017 0.75