PubRank

Ina Koch

Author PubWeight™ 38.24‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Increase of functional diversity by alternative splicing. Trends Genet 2003 2.59
2 JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology information. Nucleic Acids Res 2006 1.69
3 Application of Petri net based analysis techniques to signal transduction pathways. BMC Bioinformatics 2006 1.68
4 Atypical chronic myeloid leukemia as defined in the WHO classification is a JAK2 V617F negative neoplasm. Leuk Res 2008 1.62
5 Model validation of biological pathways using Petri nets--demonstrated for apoptosis. Biosystems 2004 1.36
6 Complexome profiling identifies TMEM126B as a component of the mitochondrial complex I assembly complex. Cell Metab 2012 1.29
7 Coexpression of cyclooxygenases (COX-1, COX-2) and vascular endothelial growth factors (VEGF-A, VEGF-C) in esophageal adenocarcinoma. Cancer Res 2005 1.25
8 Different mechanisms of cyclin D1 overexpression in multiple myeloma revealed by fluorescence in situ hybridization and quantitative analysis of mRNA levels. Blood 2004 1.20
9 Petri net modelling of gene regulation of the Duchenne muscular dystrophy. Biosystems 2008 1.18
10 The induction of cytochrome P450 3A5 (CYP3A5) in the human liver and intestine is mediated by the xenobiotic sensors pregnane X receptor (PXR) and constitutively activated receptor (CAR). J Biol Chem 2004 1.16
11 ADAM17 regulates epidermal growth factor receptor expression through the activation of Notch1 in non-small cell lung cancer. Cancer Res 2010 1.14
12 omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data. Bioinformatics 2013 1.13
13 Steady state analysis of metabolic pathways using Petri nets. In Silico Biol 2003 1.12
14 Molecular mechanisms of polymorphic CYP3A7 expression in adult human liver and intestine. J Biol Chem 2002 1.10
15 Gli1 mediates lung cancer cell proliferation and Sonic Hedgehog-dependent mesenchymal cell activation. PLoS One 2013 1.08
16 Identification of transcripts from a subtraction library which might be responsible for the mild phenotype in an intrafamilially variable course of Duchenne muscular dystrophy. Hum Genet 2003 1.00
17 Theoretical analysis of alternative splice forms using computational methods. Bioinformatics 2002 0.99
18 Efficient shRNA delivery into B and T lymphoma cells using lentiviral vector-mediated transfer. J Hematop 2008 0.97
19 Modularization of biochemical networks based on classification of Petri net t-invariants. BMC Bioinformatics 2008 0.96
20 Columba: an integrated database of proteins, structures, and annotations. BMC Bioinformatics 2005 0.95
21 MonaLisa--visualization and analysis of functional modules in biochemical networks. Bioinformatics 2013 0.94
22 Interleukin-22 is frequently expressed in small- and large-cell lung cancer and promotes growth in chemotherapy-resistant cancer cells. J Thorac Oncol 2013 0.94
23 Differential diagnosis of cyclin D2+ mantle cell lymphoma based on fluorescence in situ hybridization and quantitative real-time-PCR. Haematologica 2009 0.93
24 The impact of cyclin D1 mRNA isoforms, morphology and p53 in mantle cell lymphoma: p53 alterations and blastoid morphology are strong predictors of a high proliferation index. Haematologica 2012 0.93
25 An analysis of the Petri net based model of the human body iron homeostasis process. Comput Biol Chem 2006 0.88
26 Multiplex profiling of cellular invasion in 3D cell culture models. PLoS One 2013 0.85
27 Image database analysis of Hodgkin lymphoma. Comput Biol Chem 2013 0.82
28 Cyclin D1 positive multiple myeloma: predominance of the short, 3'UTR-deficient transcript is associated with high cyclin D1 mRNA levels in cases with t(11;14) translocation, but does not correlate with proliferation rate or genomic deletions. Leuk Res 2007 0.82
29 Re: modification of clinical presentation of prostate tumors by a novel genetic variant in CYP3A4. J Natl Cancer Inst 2002 0.82
30 PTGL--a web-based database application for protein topologies. Bioinformatics 2004 0.81
31 Exhaustive analysis of the modular structure of the spliceosomal assembly network: a Petri net approach. In Silico Biol 2010 0.78
32 Limited contribution of CYP3A5 to the hepatic 6beta-hydroxylation of testosterone. Naunyn Schmiedebergs Arch Pharmacol 2004 0.78
33 Quantitation of the JAK2V617F mutation in microdissected bone marrow trephines: equal mutational load in myeloid lineages and rare involvement of lymphoid cells. Am J Surg Pathol 2008 0.77
34 QuateXelero: an accelerated exact network motif detection algorithm. PLoS One 2013 0.76
35 Exhaustive analysis of the modular structure of the spliceosomal assembly network: a petri net approach. Stud Health Technol Inform 2011 0.76
36 PTGL: a database for secondary structure-based protein topologies. Nucleic Acids Res 2009 0.75
37 Petri nets for steady state analysis of metabolic systems. Stud Health Technol Inform 2011 0.75