The genome-wide screening of yeast deletion mutants to identify the genes required for tolerance to ethanol and other alcohols.

PubWeight™: 1.26‹?› | Rank: Top 10%

🔗 View Article (PMID 16879425)

Published in FEMS Yeast Res on August 01, 2006

Authors

Katsuhide Fujita1, Akinobu Matsuyama, Yoshinori Kobayashi, Hitoshi Iwahashi

Author Affiliations

1: JBA Daicel Chemical Industries, Tsukuba, Ibaraki, Japan. ka-fujita@aist.go.jp

Articles citing this

Genetic dissection of ethanol tolerance in the budding yeast Saccharomyces cerevisiae. Genetics (2006) 1.67

Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis. Genome Res (2012) 1.46

Genome-wide identification of Saccharomyces cerevisiae genes required for maximal tolerance to ethanol. Appl Environ Microbiol (2009) 1.45

The long physiological reach of the yeast vacuolar H+-ATPase. J Bioenerg Biomembr (2007) 1.36

Exploiting natural variation in Saccharomyces cerevisiae to identify genes for increased ethanol resistance. Genetics (2010) 1.08

Yeast toxicogenomics: genome-wide responses to chemical stresses with impact in environmental health, pharmacology, and biotechnology. Front Genet (2012) 1.02

Increased expression of the yeast multidrug resistance ABC transporter Pdr18 leads to increased ethanol tolerance and ethanol production in high gravity alcoholic fermentation. Microb Cell Fact (2012) 0.98

Generation and characterisation of stable ethanol-tolerant mutants of Saccharomyces cerevisiae. J Ind Microbiol Biotechnol (2009) 0.94

Structure/function analysis of the phosphatidylinositol-3-kinase domain of yeast tra1. Genetics (2007) 0.90

Adaptation to High Ethanol Reveals Complex Evolutionary Pathways. PLoS Genet (2015) 0.89

Identification of candidate genes for yeast engineering to improve bioethanol production in very high gravity and lignocellulosic biomass industrial fermentations. Biotechnol Biofuels (2011) 0.88

Adenylyl cyclases 1 and 8 initiate a presynaptic homeostatic response to ethanol treatment. PLoS One (2009) 0.87

Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation. Biotechnol Biofuels (2013) 0.86

Turbidostat culture of Saccharomyces cerevisiae W303-1A under selective pressure elicited by ethanol selects for mutations in SSD1 and UTH1. FEMS Yeast Res (2012) 0.85

Genome-wide Fitness Profiles Reveal a Requirement for Autophagy During Yeast Fermentation. G3 (Bethesda) (2011) 0.85

Peculiar H⁺ homeostasis of Saccharomyces cerevisiae during the late stages of wine fermentation. Appl Environ Microbiol (2012) 0.84

Quantitative 1H-NMR-metabolomics reveals extensive metabolic reprogramming and the effect of the aquaglyceroporin FPS1 in ethanol-stressed yeast cells. PLoS One (2013) 0.83

Impaired uptake and/or utilization of leucine by Saccharomyces cerevisiae is suppressed by the SPT15-300 allele of the TATA-binding protein gene. Appl Environ Microbiol (2009) 0.83

Systematic genetic array analysis links the Saccharomyces cerevisiae SAGA/SLIK and NuA4 component Tra1 to multiple cellular processes. BMC Genet (2008) 0.83

Genome-wide study of the adaptation of Saccharomyces cerevisiae to the early stages of wine fermentation. PLoS One (2013) 0.82

A system based network approach to ethanol tolerance in Saccharomyces cerevisiae. BMC Syst Biol (2014) 0.80

Genome-wide identification of the Fermentome; genes required for successful and timely completion of wine-like fermentation by Saccharomyces cerevisiae. BMC Genomics (2014) 0.80

Genetic resources for advanced biofuel production described with the Gene Ontology. Front Microbiol (2014) 0.79

Auxotrophic Mutations Reduce Tolerance of Saccharomyces cerevisiae to Very High Levels of Ethanol Stress. Eukaryot Cell (2015) 0.77

Vacuolar H+-ATPase Protects Saccharomyces cerevisiae Cells against Ethanol-Induced Oxidative and Cell Wall Stresses. Appl Environ Microbiol (2016) 0.77

How do yeast cells become tolerant to high ethanol concentrations? Curr Genet (2016) 0.76

Ethanol Cellular Defense Induce Unfolded Protein Response in Yeast. Front Microbiol (2016) 0.76

Genetic Causes of Phenotypic Adaptation to the Second Fermentation of Sparkling Wines in Saccharomyces cerevisiae. G3 (Bethesda) (2016) 0.75

Prioritized Expression of BTN2 of Saccharomyces cerevisiae under Pronounced Translation Repression Induced by Severe Ethanol Stress. Front Microbiol (2016) 0.75

Role of the DHH1 gene in the regulation of monocarboxylic acids transporters expression in Saccharomyces cerevisiae. PLoS One (2014) 0.75

Metabolic engineering of Corynebacterium crenatium for enhancing production of higher alcohols. Sci Rep (2016) 0.75

Evidence for a Role for the Plasma Membrane in the Nanomechanical Properties of the Cell Wall as Revealed by an Atomic Force Microscopy Study of the Response of Saccharomyces cerevisiae to Ethanol Stress. Appl Environ Microbiol (2016) 0.75

Protective Effects of Arginine on Saccharomyces cerevisiae Against Ethanol Stress. Sci Rep (2016) 0.75

Cellular mechanisms contributing to multiple stress tolerance in Saccharomyces cerevisiae strains with potential use in high-temperature ethanol fermentation. AMB Express (2016) 0.75

Defects in Protein Folding Machinery Affect Cell Wall Integrity and Reduce Ethanol Tolerance in S. cerevisiae. Curr Microbiol (2016) 0.75

Identification of novel genes responsible for salt tolerance by transposon mutagenesis in Saccharomyces cerevisiae. J Ind Microbiol Biotechnol (2015) 0.75

Articles by these authors

(truncated to the top 100)

Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugate. J Cell Sci (2003) 6.50

Pharmacological characteristics of a novel nonthiazolidinedione insulin sensitizer, FK614. Eur J Pharmacol (2004) 1.64

Short-term amiodarone treatment attenuates the production of monocyte cytokines and chemokines by C-reactive protein and improves cardiac function in patients with idiopathic dilated cardiomyopathy and ventricular tachycardia. Circ J (2009) 1.54

The undetermined geometrical factors contributing to the transverse conduction block of the crista terminalis. Pacing Clin Electrophysiol (2009) 1.41

Evodiamine abolishes constitutive and inducible NF-kappaB activation by inhibiting IkappaBalpha kinase activation, thereby suppressing NF-kappaB-regulated antiapoptotic and metastatic gene expression, up-regulating apoptosis, and inhibiting invasion. J Biol Chem (2005) 1.37

Integrated transcriptomics, proteomics, and metabolomics analyses to survey ozone responses in the leaves of rice seedling. J Proteome Res (2008) 1.35

Protein adsorption of ultrafine metal oxide and its influence on cytotoxicity toward cultured cells. Chem Res Toxicol (2009) 1.23

Role of defense/stress-related marker genes, proteins and secondary metabolites in defining rice self-defense mechanisms. Plant Physiol Biochem (2006) 1.21

Prognostic utility of T-wave alternans in a real-world population of patients with left ventricular dysfunction: the PREVENT-SCD study. Clin Res Cardiol (2011) 1.20

Proarrhythmic ECG deterioration caused by myocardial ischemia of the conus branch artery in patients with a Brugada ECG pattern. Pacing Clin Electrophysiol (2011) 1.14

Effects of SGLT2 selective inhibitor ipragliflozin on hyperglycemia, hyperlipidemia, hepatic steatosis, oxidative stress, inflammation, and obesity in type 2 diabetic mice. Eur J Pharmacol (2013) 1.14

Association of zinc ion release and oxidative stress induced by intratracheal instillation of ZnO nanoparticles to rat lung. Chem Biol Interact (2012) 1.13

A hydroponic rice seedling culture model system for investigating proteome of salt stress in rice leaf. Electrophoresis (2005) 1.09

Pharmacological profile of ipragliflozin (ASP1941), a novel selective SGLT2 inhibitor, in vitro and in vivo. Naunyn Schmiedebergs Arch Pharmacol (2011) 1.09

Genome-wide expression analysis of yeast response during exposure to 4 degrees C. Extremophiles (2005) 1.07

Evodiamine improves diet-induced obesity in a uncoupling protein-1-independent manner: involvement of antiadipogenic mechanism and extracellularly regulated kinase/mitogen-activated protein kinase signaling. Endocrinology (2007) 1.05

Evaluation of acute oxidative stress induced by NiO nanoparticles in vivo and in vitro. J Occup Health (2011) 1.02

In vitro evaluation of cellular response induced by manufactured nanoparticles. Chem Res Toxicol (2011) 1.02

Importance of ascorbate peroxidases OsAPX1 and OsAPX2 in the rice pathogen response pathways and growth and reproduction revealed by their transcriptional profiling. Gene (2003) 1.02

Novel mechanism of postinfarction ventricular tachycardia originating in surviving left posterior Purkinje fibers. Heart Rhythm (2006) 1.02

Dimethyl sulfoxide exposure facilitates phospholipid biosynthesis and cellular membrane proliferation in yeast cells. J Biol Chem (2003) 1.01

Construction of a recombinant Trichoderma reesei strain expressing Aspergillus aculeatus β-glucosidase 1 for efficient biomass conversion. Biotechnol Bioeng (2011) 1.00

Antidiabetic effects of SGLT2-selective inhibitor ipragliflozin in streptozotocin-nicotinamide-induced mildly diabetic mice. J Pharmacol Sci (2012) 1.00

System, trends and perspectives of proteomics in dicot plants Part I: Technologies in proteome establishment. J Chromatogr B Analyt Technol Biomed Life Sci (2005) 0.99

Response of Saccharomyces cerevisiae to a monoterpene: evaluation of antifungal potential by DNA microarray analysis. J Antimicrob Chemother (2004) 0.97

Rice octadecanoid pathway. Biochem Biophys Res Commun (2004) 0.97

α-Tocopherol suppresses lipid peroxidation and behavioral and cognitive impairments in the Ts65Dn mouse model of Down syndrome. Free Radic Biol Med (2011) 0.97

Yeast gene expression during growth at low temperature. Cryobiology (2003) 0.97

Reliable size determination of nanoparticles using dynamic light scattering method for in vitro toxicology assessment. Toxicol In Vitro (2009) 0.97

A CpG-containing oligodeoxynucleotide as an efficient adjuvant counterbalancing the Th1/Th2 immune response in diphtheria-tetanus-pertussis vaccine. Vaccine (2005) 0.96

Mechanisms of patulin toxicity under conditions that inhibit yeast growth. J Agric Food Chem (2006) 0.96

Small GTPase 'Rop': molecular switch for plant defense responses. FEBS Lett (2003) 0.96

Plant phosphoproteomics: a long road ahead. Proteomics (2006) 0.96

Rice MAPKs. Biochem Biophys Res Commun (2003) 0.95

A determination method of pristine multiwall carbon nanotubes in rat lungs after intratracheal instillation exposure by combustive oxidation-nondispersive infrared analysis. Talanta (2011) 0.95

The VA relationship after differential atrial overdrive pacing: a novel tool for the diagnosis of atrial tachycardia in the electrophysiologic laboratory. J Cardiovasc Electrophysiol (2007) 0.95

Survey of differentially expressed proteins and genes in jasmonic acid treated rice seedling shoot and root at the proteomics and transcriptomics levels. J Proteome Res (2007) 0.95

Osborn waves: history and significance. Indian Pacing Electrophysiol J (2004) 0.94

Actin-related protein Arp6 influences H2A.Z-dependent and -independent gene expression and links ribosomal protein genes to nuclear pores. PLoS Genet (2010) 0.94

Gene expression profiles in rat lung after inhalation exposure to C60 fullerene particles. Toxicology (2009) 0.94

Attenuation of lipopolysaccharide (LPS)-induced cytotoxicity by tocopherols and tocotrienols. Redox Biol (2013) 0.94

Disruption of URA7 and GAL6 improves the ethanol tolerance and fermentation capacity of Saccharomyces cerevisiae. Yeast (2007) 0.93

Ultrafine NiO particles induce cytotoxicity in vitro by cellular uptake and subsequent Ni(II) release. Chem Res Toxicol (2009) 0.92

Engineering the Oryza sativa cell wall with rice NAC transcription factors regulating secondary wall formation. Front Plant Sci (2013) 0.92

System, trends and perspectives of proteomics in dicot plants. Part III: Unraveling the proteomes influenced by the environment, and at the levels of function and genetic relationships. J Chromatogr B Analyt Technol Biomed Life Sci (2005) 0.91

Octadecanoid signaling component "burst" in rice (Oryza sativa L.) seedling leaves upon wounding by cut and treatment with fungal elicitor chitosan. Biochem Biophys Res Commun (2002) 0.91

Isolation of novel rice (Oryza sativa L.) multiple stress responsive MAP kinase gene, OsMSRMK2, whose mRNA accumulates rapidly in response to environmental cues. Biochem Biophys Res Commun (2002) 0.91

System, trends and perspectives of proteomics in dicot plants Part II: Proteomes of the complex developmental stages. J Chromatogr B Analyt Technol Biomed Life Sci (2005) 0.90

Chromium(III) oxide nanoparticles induced remarkable oxidative stress and apoptosis on culture cells. Environ Toxicol (2011) 0.90

Gel-based proteomics reveals potential novel protein markers of ozone stress in leaves of cultivated bean and maize species of Panama. Electrophoresis (2007) 0.90

Actin-related protein Arp4 functions in kinetochore assembly. Nucleic Acids Res (2007) 0.89

Association of the physical and chemical properties and the cytotoxicity of metal oxide nanoparticles: metal ion release, adsorption ability and specific surface area. Metallomics (2012) 0.89

Diverse environmental cues transiently regulate OsOPR1 of the "octadecanoid pathway" revealing its importance in rice defense/stress and development. Biochem Biophys Res Commun (2003) 0.89

Effects of sodium-glucose cotransporter 2 selective inhibitor ipragliflozin on hyperglycaemia, oxidative stress, inflammation and liver injury in streptozotocin-induced type 1 diabetic rats. J Pharm Pharmacol (2014) 0.87

The rice (Oryza sativa) blast lesion mimic mutant, blm, may confer resistance to blast pathogens by triggering multiple defense-associated signaling pathways. Plant Physiol Biochem (2005) 0.87

A new approach to species determination for yeast strains: DNA microarray-based comparative genomic hybridization using a yeast DNA microarray with 6000 genes. Yeast (2004) 0.87

Inverse correlation between jasmonic acid and salicylic acid during early wound response in rice. Biochem Biophys Res Commun (2004) 0.87

Interleukin-6, interleukin-8, and soluble tumor necrosis factor receptor-I in the cord blood as predictors of chronic lung disease in premature infants. Am J Obstet Gynecol (2004) 0.86

The stress response against denatured proteins in the deletion of cytosolic chaperones SSA1/2 is different from heat-shock response in Saccharomyces cerevisiae. BMC Genomics (2005) 0.86

Cellular responses induced by cerium oxide nanoparticles: induction of intracellular calcium level and oxidative stress on culture cells. J Biochem (2011) 0.86

Comparison of acute oxidative stress on rat lung induced by nano and fine-scale, soluble and insoluble metal oxide particles: NiO and TiO2. Inhal Toxicol (2012) 0.86

Rejuvenating rice proteomics: facts, challenges, and visions. Proteomics (2006) 0.86

In vitro evaluation of cellular responses induced by stable fullerene C60 medium dispersion. J Biochem (2010) 0.86

Effects of ultrafine TiO2 particles on gene expression profile in human keratinocytes without illumination: involvement of extracellular matrix and cell adhesion. Toxicol Lett (2009) 0.86

Toxicity of anionic detergents determined by Saccharomyces cerevisiae microarray analysis. Water Res (2004) 0.86

Analysis of the saccharification capability of high-functional cellulase JN11 for various pretreated biomasses through a comparison with commercially available counterparts. J Ind Microbiol Biotechnol (2012) 0.85

Angiotensin-converting enzyme inhibitor therapy inhibits the progression from paroxysmal atrial fibrillation to chronic atrial fibrillation. Circ J (2005) 0.85

Gene transcription in the leaves of rice undergoing salt-induced morphological changes (Oryza sativa L.). Mol Cells (2007) 0.85

Growth retardation and death of rice plants irradiated with carbon ion beams is preceded by very early dose- and time-dependent gene expression changes. Mol Cells (2008) 0.85

New protein extraction/solubilization protocol for gel-based proteomics of rat (female) whole brain and brain regions. Mol Cells (2006) 0.85

DNA microarray analyses reveal a post-irradiation differential time-dependent gene expression profile in yeast cells exposed to X-rays and gamma-rays. Biochem Biophys Res Commun (2006) 0.85

High-frequency potentials developed in wavelet-transformed electrocardiogram as a novel indicator for detecting Brugada syndrome. Heart Rhythm (2006) 0.84

Effects of the pesticide thiuram: genome-wide screening of indicator genes by yeast DNA microarray. Environ Sci Technol (2002) 0.84

Dispersion characteristics of various metal oxide secondary nanoparticles in culture medium for in vitro toxicology assessment. Toxicol In Vitro (2009) 0.84

Oligonucleotide microarray analysis of age-related gene expression profiles in miniature pigs. PLoS One (2011) 0.83

Differential expression of defense/stress-related marker proteins in leaves of a unique rice blast lesion mimic mutant (blm). J Proteome Res (2006) 0.83

Proteomics- and transcriptomics-based screening of differentially expressed proteins and genes in brain of Wig rat: a model for attention deficit hyperactivity disorder (ADHD) research. J Proteome Res (2008) 0.83

Production of polyunsaturated fatty acids in yeast Saccharomyces cerevisiae and its relation to alkaline pH tolerance. Yeast (2009) 0.83

Transcriptional profiling of indica rice cultivar IET8585 (Ajaya) infected with bacterial leaf blight pathogen Xanthomonas oryzae pv oryzae. Plant Physiol Biochem (2007) 0.83

An infant with human parechovirus type 3 infection with a distinctive rash on the extremities. Pediatr Dermatol (2012) 0.83

Mechanisms of copper toxicity in Saccharomyces cerevisiae determined by microarray analysis. Environ Toxicol (2008) 0.82

Effects of iodine on global gene expression in Saccharomyces cerevisiae. Biosci Biotechnol Biochem (2005) 0.82

Discovery of Ipragliflozin (ASP1941): a novel C-glucoside with benzothiophene structure as a potent and selective sodium glucose co-transporter 2 (SGLT2) inhibitor for the treatment of type 2 diabetes mellitus. Bioorg Med Chem (2012) 0.82

Analysis of mechanisms of T-2 toxin toxicity using yeast DNA microarrays. Int J Mol Sci (2008) 0.82

Gel-based proteomics of unilateral irradiated striatum after gamma knife surgery. J Proteome Res (2007) 0.82

Aogacillins A and B produced by Simplicillium sp. FKI-5985: new circumventors of arbekacin resistance in MRSA. Org Lett (2013) 0.82

Novel rice MAP kinases OsMSRMK3 and OsWJUMK1 involved in encountering diverse environmental stresses and developmental regulation. Biochem Biophys Res Commun (2003) 0.82

Oligonucleotide microarray analysis of dietary-induced hyperlipidemia gene expression profiles in miniature pigs. PLoS One (2012) 0.81

Ascorbic acid attenuates acute pulmonary oxidative stress and inflammation caused by zinc oxide nanoparticles. J Occup Health (2015) 0.81

lipopolysaccharide induces atrial arrhythmogenesis via down-regulation of L-type Ca2+ channel genes in rats. Int Heart J (2009) 0.81

Functional characterization of OsRacB GTPase--a potentially negative regulator of basal disease resistance in rice. Plant Physiol Biochem (2006) 0.81

Correlation of the structures of agricultural fungicides to gene expression in Saccharomyces cerevisiae upon exposure to toxic doses. Environ Sci Technol (2003) 0.81

Potential contribution of vasoconstriction to suppression of heat loss and homeothermic regulation in UCP1-deficient mice. Pflugers Arch (2006) 0.81

Screening of genes that respond to cryopreservation stress using yeast DNA microarray. Cryobiology (2003) 0.81

5-Aminolevulinic acid enhances cancer radiotherapy in a mouse tumor model. Springerplus (2013) 0.81

Toxicity of methanol and formaldehyde towards Saccharomyces cerevisiae as assessed by DNA microarray analysis. Appl Biochem Biotechnol (2009) 0.81

A knockout strain of CPR1 induced during fermentation of Saccharomyces cerevisiae KNU5377 is susceptible to various types of stress. J Biosci Bioeng (2006) 0.81

Characterization of fullerene colloidal suspension in a cell culture medium for in vitro toxicity assessment. Mol Biosyst (2010) 0.81

A new approach for the comparison of conduction abnormality between arrhythmogenic right ventricular cardiomyopathy/dysplasia and Brugada syndrome. Ann Noninvasive Electrocardiol (2011) 0.81

DNA microarray analysis suggests that zinc pyrithione causes iron starvation to the yeast Saccharomyces cerevisiae. J Biosci Bioeng (2009) 0.80