Understanding ligand binding effects on the conformation of estrogen receptor alpha-DNA complexes: a combinational quartz crystal microbalance with dissipation and surface plasmon resonance study.

PubWeight™: 0.98‹?› | Rank: Top 15%

🔗 View Article (PMC 1877774)

Published in Biophys J on March 23, 2007

Authors

Wendy Y X Peh1, Erik Reimhult, Huey Fang Teh, Jane S Thomsen, Xiaodi Su

Author Affiliations

1: Institute of Materials Research and Engineering, Singapore 117602.

Articles citing this

Quartz crystal microbalance with dissipation monitoring: enabling real-time characterization of biological materials and their interactions. J Biomol Tech (2008) 1.28

Point-of-care assays for tuberculosis: role of nanotechnology/microfluidics. Biotechnol Adv (2013) 1.06

Binding of PFOS to serum albumin and DNA: insight into the molecular toxicity of perfluorochemicals. BMC Mol Biol (2009) 0.94

Quantitative determination of size and shape of surface-bound DNA using an acoustic wave sensor. Biophys J (2008) 0.90

Pirin is an iron-dependent redox regulator of NF-κB. Proc Natl Acad Sci U S A (2013) 0.86

Assessment and molecular actions of endocrine-disrupting chemicals that interfere with estrogen receptor pathways. Int J Endocrinol (2013) 0.79

Using complementary acoustic and optical techniques for quantitative monitoring of biomolecular adsorption at interfaces. Biosensors (Basel) (2012) 0.78

The innate immune properties of airway mucosal surfaces are regulated by dynamic interactions between mucins and interacting proteins: the mucin interactome. Mucosal Immunol (2016) 0.78

Early Detection of Lung Cancer Using Nano-Nose - A Review. Open Biomed Eng J (2015) 0.77

Nanobioengineering and Characterization of a Novel Estrogen Receptor Biosensor. Sensors (Basel) (2008) 0.75

Broadband 120 MHz Impedance Quartz Crystal Microbalance (QCM) with Calibrated Resistance and Quantitative Dissipation for Biosensing Measurements at Higher Harmonic Frequencies. Biosensors (Basel) (2016) 0.75

Articles cited by this

The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen. Cell (1998) 9.96

Coupling of local folding to site-specific binding of proteins to DNA. Science (1994) 9.49

Molecular basis of agonism and antagonism in the oestrogen receptor. Nature (1997) 9.09

Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes. Science (2004) 4.92

Estrogen receptors and human disease. J Clin Invest (2006) 4.91

Estrogen receptor interaction with estrogen response elements. Nucleic Acids Res (2001) 4.23

A 13 bp palindrome is a functional estrogen responsive element and interacts specifically with estrogen receptor. Nucleic Acids Res (1988) 2.67

Variations in coupled water, viscoelastic properties, and film thickness of a Mefp-1 protein film during adsorption and cross-linking: a quartz crystal microbalance with dissipation monitoring, ellipsometry, and surface plasmon resonance study. Anal Chem (2001) 2.52

Binding of the estrogen receptor to DNA. The role of waters. Biophys J (1997) 2.02

Probing BSA binding to citrate-coated gold nanoparticles and surfaces. Langmuir (2005) 1.97

Estrogen receptor interaction with co-activators and co-repressors. Steroids (2000) 1.91

Neuroprotective effects of estrogens: potential mechanisms of action. Int J Dev Neurosci (2000) 1.75

Conformational changes and coactivator recruitment by novel ligands for estrogen receptor-alpha and estrogen receptor-beta: correlations with biological character and distinct differences among SRC coactivator family members. Endocrinology (2000) 1.50

Characterization of DNA immobilization and subsequent hybridization on a 2D arrangement of streptavidin on a biotin-modified lipid bilayer supported on SiO2. Anal Chem (2003) 1.41

Comparison of surface plasmon resonance spectroscopy and quartz crystal microbalance techniques for studying DNA assembly and hybridization. Biosens Bioelectron (2005) 1.33

Human immunoglobulin adsorption investigated by means of quartz crystal microbalance dissipation, atomic force microscopy, surface acoustic wave, and surface plasmon resonance techniques. Langmuir (2004) 1.32

Estrogen-mediated immunosuppression in autoimmune diseases. Inflamm Res (1998) 1.31

DNA recognition by the oestrogen receptor: from solution to the crystal. Structure (1993) 1.30

Allosteric modulation of estrogen receptor conformation by different estrogen response elements. Mol Endocrinol (2001) 1.28

Structural changes in hemoglobin during adsorption to solid surfaces: effects of pH, ionic strength, and ligand binding. Proc Natl Acad Sci U S A (1998) 1.24

Structural determinants of DNA-binding specificity by steroid receptors. Mol Endocrinol (1995) 1.22

Estrogen receptors: how do they control reproductive and nonreproductive functions? Biochem Biophys Res Commun (2000) 1.20

Simultaneous surface plasmon resonance and quartz crystal microbalance with dissipation monitoring measurements of biomolecular adsorption events involving structural transformations and variations in coupled water. Anal Chem (2004) 1.19

The effects of estrogen-responsive element- and ligand-induced structural changes on the recruitment of cofactors and transcriptional responses by ER alpha and ER beta. Mol Endocrinol (2002) 1.18

Effect of antagonists on DNA binding properties of the human estrogen receptor in vitro and in vivo. Mol Endocrinol (1995) 1.15

The role of DNA response elements as allosteric modulators of steroid receptor function. Mol Cell Endocrinol (2005) 1.14

Estrogen response elements function as allosteric modulators of estrogen receptor conformation. Mol Cell Biol (1998) 1.13

Human estrogen receptor bound to an estrogen response element bends DNA. Mol Endocrinol (1993) 1.12

Characterization of protein--DNA interactions using surface plasmon resonance spectroscopy with various assay schemes. Biochemistry (2007) 1.04

Equilibrium binding of estrogen receptor with DNA using fluorescence anisotropy. J Biol Chem (1997) 1.02

Ligands differentially modulate the protein interactions of the human estrogen receptors alpha and beta. J Mol Biol (2003) 0.98

Quantitative characterization of the interaction between purified human estrogen receptor alpha and DNA using fluorescence anisotropy. Nucleic Acids Res (2000) 0.94

Interaction and dissociation by ligands of estrogen receptor and Hsp90: the antiestrogen RU 58668 induces a protein synthesis-dependent clustering of the receptor in the cytoplasm. Mol Endocrinol (1998) 0.94

Yeast two-hybrid system demonstrates that estrogen receptor dimerization is ligand-dependent in vivo. J Biol Chem (1995) 0.92

Detection of point mutation and insertion mutations in DNA using a quartz crystal microbalance and MutS, a mismatch binding protein. Anal Chem (2004) 0.90

Increase in the stability and helical content of estrogen receptor alpha in the presence of the estrogen response element: analysis by circular dichroism spectroscopy. Biochemistry (2001) 0.88

Estrogen receptor-induced bending of the Xenopus vitellogenin A2 gene hormone response element. Biochem Biophys Res Commun (1992) 0.85

Molecular flexibility in protein-DNA interactions. Biosystems (2006) 0.85

Vesicle fusion studied by surface plasmon resonance and surface plasmon fluorescence spectroscopy. Biophys J (2006) 0.82

Viscoelastic modeling of template-directed DNA synthesis. Anal Chem (2005) 0.82

Conformational changes in the human estrogen receptor observed by (19)F NMR. Biochem Biophys Res Commun (2000) 0.77

Articles by these authors

An oestrogen-receptor-alpha-bound human chromatin interactome. Nature (2009) 12.16

Whole-genome cartography of estrogen receptor alpha binding sites. PLoS Genet (2007) 5.85

Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells. Genome Biol (2004) 2.77

Integrative model of genomic factors for determining binding site selection by estrogen receptor-α. Mol Syst Biol (2010) 2.04

Ultrastable iron oxide nanoparticle colloidal suspensions using dispersants with catechol-derived anchor groups. Nano Lett (2009) 1.85

Indirect inhibition of Toll-like receptor and type I interferon responses by ITAM-coupled receptors and integrins. Immunity (2010) 1.78

A gamma interferon independent mechanism of CD4 T cell mediated control of M. tuberculosis infection in vivo. PLoS Pathog (2011) 1.56

De-novo identification of PPARgamma/RXR binding sites and direct targets during adipogenesis. PLoS One (2009) 1.39

Triggered release from liposomes through magnetic actuation of iron oxide nanoparticle containing membranes. Nano Lett (2011) 1.36

Stabilization and functionalization of iron oxide nanoparticles for biomedical applications. Nanoscale (2011) 1.31

Multiplatform genome-wide identification and modeling of functional human estrogen receptor binding sites. Genome Biol (2006) 1.17

Optical anisotropy of supported lipid structures probed by waveguide spectroscopy and its application to study of supported lipid bilayer formation kinetics. Anal Chem (2008) 1.15

Inhibitory effects of estrogen receptor beta on specific hormone-responsive gene expression and association with disease outcome in primary breast cancer. Breast Cancer Res (2007) 1.11

Characterization of protein--DNA interactions using surface plasmon resonance spectroscopy with various assay schemes. Biochemistry (2007) 1.04

Surface functionalization of single superparamagnetic iron oxide nanoparticles for targeted magnetic resonance imaging. Small (2009) 0.96

Measuring single-nanoparticle wetting properties by freeze-fracture shadow-casting cryo-scanning electron microscopy. Nat Commun (2011) 0.95

Formation of supported bacterial lipid membrane mimics. Biointerphases (2008) 0.95

Novel recombinant RD2- and RD11-encoded Mycobacterium tuberculosis antigens are potential candidates for diagnosis of tuberculosis infections in BCG-vaccinated individuals. Microbes Infect (2009) 0.94

Comparative study of random and oriented antibody immobilization as measured by dual polarization interferometry and surface plasmon resonance spectroscopy. Langmuir (2011) 0.94

Evaluation of two- and three-dimensional streptavidin binding platforms for surface plasmon resonance spectroscopy studies of DNA hybridization and protein-DNA binding. Biosens Bioelectron (2007) 0.91

Surface plasmon resonance spectroscopy study of interfacial binding of thrombin to antithrombin DNA aptamers. J Colloid Interface Sci (2007) 0.90

QCM-D analysis of binding mechanism of phage particles displaying a constrained heptapeptide with specific affinity to SiO2 and TiO2. Anal Chem (2006) 0.89

PEGylated anti-MUC1 aptamer-doxorubicin complex for targeted drug delivery to MCF7 breast cancer cells. Macromol Biosci (2011) 0.86

Surface modification studies of edge-oriented molybdenum sulfide nanosheets. Langmuir (2004) 0.86

Supported lipid bilayer microarrays created by non-contact printing. Lab Chip (2011) 0.86

Highly sensitive and reversible silicon nanowire biosensor to study nuclear hormone receptor protein and response element DNA interactions. Biosens Bioelectron (2010) 0.85

Single cell 3-D platform to study ligand mobility in cell-cell contact. Lab Chip (2011) 0.85

Probing the interaction between peptides and metal oxides using point mutants of a TiO2-binding peptide. Langmuir (2008) 0.84

Nanoparticle actuated hollow drug delivery vehicles. Nanomedicine (Lond) (2012) 0.84

Molecular conservation of estrogen-response associated with cell cycle regulation, hormonal carcinogenesis and cancer in zebrafish and human cancer cell lines. BMC Med Genomics (2011) 0.84

SPR study of DNA hybridization with DNA and PNA probes under stringent conditions. Biosens Bioelectron (2008) 0.84

Context-dependent adsorption behavior of cyclic and linear peptides on metal oxide surfaces. Langmuir (2009) 0.84

Enzyme-based colorimetric detection of nucleic acids using peptide nucleic acid-immobilized microwell plates. Anal Chem (2007) 0.84

Colorimetric detection of DNA using unmodified metallic nanoparticles and peptide nucleic acid probes. Anal Chem (2009) 0.83

Particle lithography from colloidal self-assembly at liquid-liquid interfaces. ACS Nano (2010) 0.83

The focal adhesion protein vinexin alpha regulates the phosphorylation and activity of estrogen receptor alpha. J Biol Chem (2003) 0.83

Melt-grafting for the synthesis of core-shell nanoparticles with ultra-high dispersant density. Nanoscale (2015) 0.83

Poly(vinyl alcohol) physical hydrogels: noncryogenic stabilization allows nano- and microscale materials design. Langmuir (2011) 0.83

Surface plasmon resonance study of cooperative interactions of estrogen receptor alpha and transcriptional factor Sp1 with composite DNA elements. Anal Chem (2009) 0.83

High sensitivity molecule detection by plasmonic nanoantennas with selective binding at electromagnetic hotspots. Nanoscale (2014) 0.82

Supported lipopolysaccharide bilayers. Langmuir (2012) 0.82

The Ah receptor inhibits estrogen-induced estrogen receptor beta in breast cancer cells. Biochem Biophys Res Commun (2004) 0.82

Embedded plasmonic nanomenhirs as location-specific biosensors. Nano Lett (2013) 0.82

Pleckstrin homology-phospholipase C-δ1 interaction with phosphatidylinositol 4,5-bisphosphate containing supported lipid bilayers monitored in situ with dual polarization interferometry. Anal Chem (2011) 0.81

Study of single-stranded DNA binding protein-nucleic acids interactions using unmodified gold nanoparticles and its application for detection of single nucleotide polymorphisms. Anal Chem (2011) 0.81

Formation of supported lipid bilayers on indium tin oxide for dynamically-patterned membrane-functionalized microelectrode arrays. Lab Chip (2008) 0.81

Comparison of DNA, aminoethylglycyl PNA and pyrrolidinyl PNA as probes for detection of DNA hybridization using surface plasmon resonance technique. Biosens Bioelectron (2009) 0.81

Understanding self-assembled amphiphilic peptide supramolecular structures from primary structure helix propensity. Langmuir (2008) 0.81

Formation of nanopore-spanning lipid bilayers through liposome fusion. Langmuir (2011) 0.80

Profiling of metabolites in oil palm mesocarp at different stages of oil biosynthesis. J Agric Food Chem (2013) 0.80

Study of nucleic acid-gold nanorod interactions and detecting nucleic acid hybridization using gold nanorod solutions in the presence of sodium citrate. Biointerphases (2010) 0.80

Lipid redistribution in phosphatidylserine-containing vesicles adsorbing on titania. Biointerphases (2008) 0.80

Liposomes tethered to omega-functional PEG brushes and induced formation of PEG brush supported planar lipid bilayers. Langmuir (2009) 0.80

Characterization of supported lipid bilayers incorporating the phosphoinositides phosphatidylinositol 4,5-biphosphate and phosphoinositol-3,4,5-triphosphate by complementary techniques. Biointerphases (2010) 0.80

Rv1985c, a promising novel antigen for diagnosis of tuberculosis infection from BCG-vaccinated controls. BMC Infect Dis (2010) 0.80

Gold-nanoparticle-based assay for instantaneous detection of nuclear hormone receptor-response elements interactions. Anal Chem (2010) 0.79

Combinational application of surface plasmon resonance spectroscopy and quartz crystal microbalance for studying nuclear hormone receptor-response element interactions. Anal Chem (2006) 0.79

Lipogels: surface-adherent composite hydrogels assembled from poly(vinyl alcohol) and liposomes. Nanoscale (2013) 0.79

Antimicrobial functionalization of silicone surfaces with engineered short peptides having broad spectrum antimicrobial and salt-resistant properties. Acta Biomater (2013) 0.79

Sensing of transcription factor through controlled-assembly of metal nanoparticles modified with segmented DNA elements. ACS Nano (2010) 0.79

Designer tridentate mucin 1 aptamer for targeted drug delivery. J Pharm Sci (2012) 0.79

Self-assembly of iron oxide-poly(ethylene glycol) core-shell nanoparticles at liquid-liquid interfaces. Chimia (Aarau) (2010) 0.79

Supported lipid bilayers, tethered lipid vesicles, and vesicle fusion investigated using gravimetric, plasmonic, and microscopy techniques. Biointerphases (2008) 0.78

Patterning of supported lipid bilayers and proteins using material selective nitrodopamine-mPEG. Biomater Sci (2014) 0.78

Purification and characterization of heparan sulfate from human primary osteoblasts. J Cell Biochem (2009) 0.78

A two-step antibody strategy for surface plasmon resonance spectroscopy detection of protein-DNA interactions in nuclear extracts. Anal Biochem (2008) 0.78

Tuning the cellular uptake properties of luminescent heterobimetallic iridium(III)-ruthenium(II) DNA imaging probes. Chemistry (2014) 0.77

Affinity analysis of DNA aptamer-peptide interactions using gold nanoparticles. Anal Biochem (2011) 0.77

Dinuclear osmium(II) probes for high-resolution visualisation of cellular DNA structure using electron microscopy. Chem Commun (Camb) (2014) 0.77

Fast screening of ligand-protein interactions based on ligand-induced protein stabilization of gold nanoparticles. Anal Chem (2014) 0.76

Protein-based fluorescent metal nanoclusters for small molecular drug screening. Chem Commun (Camb) (2014) 0.76

Surface plasmon resonance study of PNA interactions with double-stranded DNA. Biosens Bioelectron (2010) 0.76

Switching transport through nanopores with pH-responsive polymer brushes for controlled ion permeability. ACS Appl Mater Interfaces (2013) 0.76

Automated time-resolved analysis of bacteria-substrate interactions using functionalized microparticles and flow cytometry. Biomaterials (2011) 0.76

Magnetic decoupling of surface Fe3+ in magnetite nanoparticles upon nitrocatechol-anchored dispersant binding. Chemistry (2011) 0.76

Femtomol SPR detection of DNA-PNA hybridization with the assistance of DNA-guided polyaniline deposition. Biosens Bioelectron (2008) 0.76

A plasmonic nanosensor with inverse sensitivity for circulating cell-free DNA quantification. Chem Commun (Camb) (2015) 0.75

Surface plasmon resonance spectroscopy and electrochemistry study of 4-nitro-1,2-phenylenediamine: a switchable redox polymer with nitro functional groups. Langmuir (2006) 0.75

Quartz crystal microbalance with integrated surface plasmon grating coupler. Anal Chem (2008) 0.75

Nitrocatechol dispersants to tailor superparamagnetic Fe3O4 nanoparticles. Chimia (Aarau) (2010) 0.75

Nanomaterial-based biosensors using dual transducing elements for solution phase detection. Analyst (2015) 0.75

Preparation and dynamic patterning of supported lipid membranes mimicking cell membranes. Methods Mol Biol (2011) 0.75

Hybrid sensor using gold nanoparticles and conjugated polyelectrolytes for studying sequence rule in protein-DNA interactions. ACS Appl Mater Interfaces (2013) 0.75

Study sequence rules of estrogen receptor α-DNA interactions using dual polarization interferometry and computational modeling. Anal Biochem (2012) 0.75

Wide-field single metal nanoparticle spectroscopy for high throughput localized surface plasmon resonance sensing. Lab Chip (2011) 0.75

Affinity Purification and Single-Molecule Analysis of Integral Membrane Proteins from Crude Cell-Membrane Preparations. Nano Lett (2017) 0.75

Phospholipase A2-Induced Degradation and Release from Lipid-Containing Polymersomes. Langmuir (2017) 0.75

Mobile and three-dimensional presentation of adhesion proteins within microwells. Methods Mol Biol (2013) 0.75