Published in EXS on January 01, 2007
Translational systems biology of inflammation. PLoS Comput Biol (2008) 2.15
The female gametophyte: an emerging model for cell type-specific systems biology in plant development. Front Plant Sci (2015) 0.81
A map of the cis-regulatory sequences in the mouse genome. Nature (2012) 8.74
A cis-regulatory map of the Drosophila genome. Nature (2011) 4.80
Epigenomic analysis of multilineage differentiation of human embryonic stem cells. Cell (2013) 3.81
Progressive degeneration of human neural stem cells caused by pathogenic LRRK2. Nature (2012) 3.38
A high-quality catalog of the Drosophila melanogaster proteome. Nat Biotechnol (2007) 3.34
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria. Proc Natl Acad Sci U S A (2009) 3.11
Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes. Cell (2010) 3.04
A lymphotoxin-driven pathway to hepatocellular carcinoma. Cancer Cell (2009) 2.64
Gain and loss of multiple genes during the evolution of Helicobacter pylori. PLoS Genet (2005) 2.61
PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells. Mol Syst Biol (2007) 2.56
Follicular dendritic cells emerge from ubiquitous perivascular precursors. Cell (2012) 2.50
Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast. Sci Signal (2010) 2.36
Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations. Mol Cell Proteomics (2006) 2.09
Genome-wide analysis of transcriptional hierarchy and feedback regulation in the flagellar system of Helicobacter pylori. Mol Microbiol (2004) 1.97
PhosphoPep--a database of protein phosphorylation sites in model organisms. Nat Biotechnol (2008) 1.96
Characterization of the interactome of the human MutL homologues MLH1, PMS1, and PMS2. J Biol Chem (2006) 1.48
Myc-mediated repression of microRNA-34a promotes high-grade transformation of B-cell lymphoma by dysregulation of FoxP1. Blood (2011) 1.32
Early aldosterone-induced gene product regulates the epithelial sodium channel by deubiquitylation. J Am Soc Nephrol (2007) 1.31
The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase. Plant Cell (2006) 1.31
MIAME/Plant - adding value to plant microarrray experiments. Plant Methods (2006) 1.29
Global chromatin state analysis reveals lineage-specific enhancers during the initiation of human T helper 1 and T helper 2 cell polarization. Immunity (2013) 1.27
Redundant publications in scientific ophthalmologic journals: the tip of the iceberg? Ophthalmology (2004) 1.26
Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods. J Proteomics (2010) 1.20
Transcriptional regulation by Pol II(G) involving mediator and competitive interactions of Gdown1 and TFIIF with Pol II. Mol Cell (2012) 1.18
MAGMA: analysis of two-channel microarrays made easy. Nucleic Acids Res (2007) 1.16
Analysing the causes of chronic cough: relation to diesel exhaust, ozone, nitrogen oxides, sulphur oxides and other environmental factors. J Occup Med Toxicol (2006) 1.06
Regulation of DNA methylation turnover at LTR retrotransposons and imprinted loci by the histone methyltransferase Setdb1. Proc Natl Acad Sci U S A (2014) 1.04
TGFbeta directs gene expression of activated microglia to an anti-inflammatory phenotype strongly focusing on chemokine genes and cell migratory genes. Glia (2003) 1.02
When teachers go the extra mile: foci of organisational identification as determinants of different forms of organisational citizenship behaviour among schoolteachers. Br J Educ Psychol (2003) 1.00
B-type natriuretic peptide concentrations predict the progression of nondiabetic chronic kidney disease: the Mild-to-Moderate Kidney Disease Study. Clin Chem (2007) 1.00
The rapid induction of glutathione S-transferases AtGSTF2 and AtGSTF6 by avirulent Pseudomonas syringae is the result of combined salicylic acid and ethylene signaling. Plant Cell Physiol (2003) 1.00
Mining co-regulated gene profiles for the detection of functional associations in gene expression data. Bioinformatics (2007) 0.96
Identification and relative quantification of membrane proteins by surface biotinylation and two-dimensional peptide mapping. Proteomics (2005) 0.95
The draft genome of Primula veris yields insights into the molecular basis of heterostyly. Genome Biol (2015) 0.94
Genome-wide analysis of the unfolded protein response in fibroblasts from congenital disorders of glycosylation type-I patients. FASEB J (2004) 0.94
Fast optimization of a bimorph mirror using x-ray grating interferometry. Opt Lett (2014) 0.92
Blind spots of quantitative RNA-seq: the limits for assessing abundance, differential expression, and isoform switching. BMC Bioinformatics (2013) 0.92
Transcriptional stability of cultured cells upon prion infection. J Mol Biol (2007) 0.92
Sirolimus ameliorates the enhanced expression of metalloproteinases in a rat model of autosomal dominant polycystic kidney disease. Nephrol Dial Transplant (2007) 0.91
Genome-wide gene expression analysis identifies K-ras as a regulator of alcohol intake. Brain Res (2010) 0.88
iTRAQ-Based and Label-Free Proteomics Approaches for Studies of Human Adenovirus Infections. Int J Proteomics (2013) 0.88
Direct contact as a moderator of extended contact effects: cross-sectional and longitudinal impact on outgroup attitudes, behavioral intentions, and attitude certainty. Pers Soc Psychol Bull (2010) 0.88
Side effects of multiculturalism: the interaction effect of a multicultural ideology and authoritarianism on prejudice and diversity beliefs. Pers Soc Psychol Bull (2013) 0.87
PhyloDetect: a likelihood-based strategy for detecting microorganisms with diagnostic microarrays. Bioinformatics (2008) 0.87
Precise breakpoint localization of large genomic deletions using PacBio and Illumina next-generation sequencers. Biotechniques (2013) 0.87
Contextual effect of positive intergroup contact on outgroup prejudice. Proc Natl Acad Sci U S A (2014) 0.86
The cysteinyl-leukotriene-1 receptor antagonist zafirlukast is a potent secretagogue in rat and human airways. Eur J Pharmacol (2005) 0.86
An integrated proteomics approach for studying the molecular pathogenesis of Dupuytren's disease. J Pathol (2009) 0.85
Malignant catarrhal fever of cattle is associated with low abundance of IL-2 transcript and a predominantly latent profile of ovine herpesvirus 2 gene expression. PLoS One (2009) 0.85
Mobile Air Quality Studies (MAQS)-an international project. J Occup Med Toxicol (2010) 0.85
Differential antiproliferative mechanisms of novel derivative of benzimidazo[1,2-alpha]quinoline in colon cancer cells depending on their p53 status. Mol Cancer Ther (2008) 0.83
Gene expression profiles of different breast cancer cells compared with their responsiveness to fermented mistletoe (Viscum album L.) extracts Iscador from oak (Quercus), pine (Pinus), white fir (Abies) and apple tree (Malus) in vitro. Arzneimittelforschung (2006) 0.83
[Ophthalmology "Made in Switzerland" -- Swiss papers listed in Medline]. Klin Monbl Augenheilkd (2002) 0.82
Imatinib-associated pulmonary alveolar proteinosis. Am J Med (2003) 0.82
MnSOD marks cord blood late outgrowth endothelial cells and accompanies robust resistance to oxidative stress. Biochem Biophys Res Commun (2006) 0.82
The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci (2007) 0.82
Mucus and fatal asthma. Am J Med (2004) 0.81
Preferred analysis methods for single genomic regions in RNA sequencing revealed by processing the shape of coverage. Nucleic Acids Res (2011) 0.80
Life sciences data and application integration with B-fabric. J Integr Bioinform (2011) 0.80
Drop drying on surfaces determines chemical reactivity - the specific case of immobilization of oligonucleotides on microarrays. BMC Biophys (2013) 0.80
A preliminary investigation demonstrating the effect of quercetin on the expression of genes related to cell-cycle arrest, apoptosis and xenobiotic metabolism in human CO115 colon-adenocarcinoma cells using DNA microarray. Biotechnol Appl Biochem (2006) 0.79
Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells. Genome Res (2013) 0.79
Casting light on molecular events underlying anti-cancer drug treatment: what can be seen from the proteomics point of view? Cancer Treat Rev (2006) 0.79
[How well-informed is the ophthalmology patient?]. Klin Monbl Augenheilkd (2002) 0.79
Phosphorylated serine and threonine residues promote site-specific fragmentation of singly charged, arginine-containing peptide ions. Rapid Commun Mass Spectrom (2009) 0.79
PTM MarkerFinder, a software tool to detect and validate spectra from peptides carrying post-translational modifications. Proteomics (2013) 0.78
Database independent detection of isotopically labeled MS/MS spectrum peptide pairs. J Chromatogr B Analyt Technol Biomed Life Sci (2005) 0.77
Development and experimental validation of a nifH oligonucleotide microarray to study diazotrophic communities in a glacier forefield. Environ Microbiol (2009) 0.76
Optimization workflow for the processing of high quality glass-based microarrays: applications in DNA, peptide, antibody, and carbohydrate microarraying. Methods Mol Biol (2007) 0.76
Quality considerations and selection of surface chemistry for glass-based DNA, peptide, antibody, carbohydrate, and small molecule microarrays. Methods Mol Biol (2007) 0.76
PPINGUIN: Peptide Profiling Guided Identification of Proteins improves quantitation of iTRAQ ratios. BMC Bioinformatics (2012) 0.75
Effect of montelukast on platelet activating factor- and tachykinin induced mucus secretion in the rat. J Occup Med Toxicol (2008) 0.75
FCC - An automated rule-based processing tool for life science data. Source Code Biol Med (2013) 0.75
To be(long) or not to be(long): social identification in organizational contexts. Genet Soc Gen Psychol Monogr (2005) 0.75
Emotional consequences of collective action participation: differentiating self-directed and outgroup-directed emotions. Pers Soc Psychol Bull (2011) 0.75
Processing protocols for high quality glass-based microarrays: applications in DNA, peptide, antibody, and carbohydrate microarraying. Methods Mol Biol (2007) 0.75
Journals: redundant publications are bad news. Nature (2003) 0.75
TO TREAT OR NOT TO TREAT, CHEYNE-STOKES RESPIRATION IN A YOUNG ADULT WITH VASCULAR ENCEPHALOPATHY. Ideggyogy Sz (2016) 0.75
Dynamic processes in intergroup contact. Br J Soc Psychol (2012) 0.75
Perceived marginalization and aggression: a longitudinal study with low-educated adolescents. Br J Soc Psychol (2014) 0.75
Role of perceived importance in intergroup contact. J Pers Soc Psychol (2004) 0.75