Published in Methods Enzymol on January 01, 2007
Cellular IRES-mediated translation: the war of ITAFs in pathophysiological states. Cell Cycle (2011) 2.15
Translation initiation on mammalian mRNAs with structured 5'UTRs requires DExH-box protein DHX29. Cell (2008) 2.11
Hepatitis-C-virus-like internal ribosome entry sites displace eIF3 to gain access to the 40S subunit. Nature (2013) 1.95
Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome. Genes Dev (2011) 1.89
Dissociation by Pelota, Hbs1 and ABCE1 of mammalian vacant 80S ribosomes and stalled elongation complexes. EMBO J (2011) 1.76
eIF2-dependent and eIF2-independent modes of initiation on the CSFV IRES: a common role of domain II. EMBO J (2008) 1.71
Structure of the mammalian ribosomal 43S preinitiation complex bound to the scanning factor DHX29. Cell (2013) 1.68
Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing. Nucleic Acids Res (2009) 1.61
Direct functional interaction of initiation factor eIF4G with type 1 internal ribosomal entry sites. Proc Natl Acad Sci U S A (2009) 1.54
A Conserved Interaction between a C-Terminal Motif in Norovirus VPg and the HEAT-1 Domain of eIF4G Is Essential for Translation Initiation. PLoS Pathog (2016) 1.42
Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors. Nucleic Acids Res (2011) 1.33
Poly(A)-binding protein-interacting protein 1 binds to eukaryotic translation initiation factor 3 to stimulate translation. Mol Cell Biol (2008) 1.30
Bypassing of stems versus linear base-by-base inspection of mammalian mRNAs during ribosomal scanning. EMBO J (2010) 1.20
The pathway of hepatitis C virus mRNA recruitment to the human ribosome. Nat Struct Mol Biol (2009) 1.18
The mechanism of translation initiation on Type 1 picornavirus IRESs. EMBO J (2013) 1.12
Factor requirements for translation initiation on the Simian picornavirus internal ribosomal entry site. RNA (2007) 1.10
Inhibition of translation by IFIT family members is determined by their ability to interact selectively with the 5'-terminal regions of cap0-, cap1- and 5'ppp- mRNAs. Nucleic Acids Res (2013) 1.07
General RNA-binding proteins have a function in poly(A)-binding protein-dependent translation. EMBO J (2008) 1.06
Structural features of the Seneca Valley virus internal ribosome entry site (IRES) element: a picornavirus with a pestivirus-like IRES. J Virol (2011) 1.05
Cleavage of eukaryotic initiation factor eIF5B by enterovirus 3C proteases. Virology (2008) 1.03
A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3. Nucleic Acids Res (2010) 1.02
A new framework for understanding IRES-mediated translation. Gene (2012) 1.01
The mechanism of translation initiation on Aichivirus RNA mediated by a novel type of picornavirus IRES. EMBO J (2011) 1.01
Poly(A) leader of eukaryotic mRNA bypasses the dependence of translation on initiation factors. Proc Natl Acad Sci U S A (2008) 1.00
The DEAD-box helicase DDX3 supports the assembly of functional 80S ribosomes. Nucleic Acids Res (2012) 1.00
Control of Paip1-eukayrotic translation initiation factor 3 interaction by amino acids through S6 kinase. Mol Cell Biol (2014) 0.99
Intrinsic RNA binding by the eukaryotic initiation factor 4F depends on a minimal RNA length but not on the m7G cap. J Biol Chem (2009) 0.98
Initiation factor eIF2-independent mode of c-Src mRNA translation occurs via an internal ribosome entry site. J Biol Chem (2009) 0.95
A distinct class of internal ribosomal entry site in members of the Kobuvirus and proposed Salivirus and Paraturdivirus genera of the Picornaviridae. J Virol (2011) 0.95
A stimulatory role for the La-related protein 4B in translation. RNA (2010) 0.94
Control of translation and miRNA-dependent repression by a novel poly(A) binding protein, hnRNP-Q. PLoS Biol (2013) 0.91
Quantitative analysis of ribosome-mRNA complexes at different translation stages. Nucleic Acids Res (2009) 0.91
Translation initiation on mRNAs bound by nuclear cap-binding protein complex CBP80/20 requires interaction between CBP80/20-dependent translation initiation factor and eukaryotic translation initiation factor 3g. J Biol Chem (2012) 0.91
Yeast Upf1 CH domain interacts with Rps26 of the 40S ribosomal subunit. RNA (2013) 0.88
Roles of helicases in translation initiation: a mechanistic view. Biochim Biophys Acta (2013) 0.86
Severe acute respiratory syndrome coronavirus protein nsp1 is a novel eukaryotic translation inhibitor that represses multiple steps of translation initiation. J Virol (2012) 0.86
Reconstitution of the human U snRNP assembly machinery reveals stepwise Sm protein organization. EMBO J (2015) 0.82
Attachment of ribosomal complexes and retrograde scanning during initiation on the Halastavi árva virus IRES. Nucleic Acids Res (2016) 0.82
Molecular architecture of the ribosome-bound Hepatitis C Virus internal ribosomal entry site RNA. EMBO J (2015) 0.81
Dual function of UPF3B in early and late translation termination. EMBO J (2017) 0.81
Direct binding of the Alu binding protein dimer SRP9/14 to 40S ribosomal subunits promotes stress granule formation and is regulated by Alu RNA. Nucleic Acids Res (2014) 0.80
40S recruitment in the absence of eIF4G/4A by EMCV IRES refines the model for translation initiation on the archetype of Type II IRESs. Nucleic Acids Res (2014) 0.79
LOOP IIId of the HCV IRES is essential for the structural rearrangement of the 40S-HCV IRES complex. Nucleic Acids Res (2015) 0.79
Initiation on the divergent Type I cadicivirus IRES: factor requirements and interactions with the translation apparatus. Nucleic Acids Res (2016) 0.76
Paip1, an effective stimulator of translation initiation, is targeted by WWP2 for ubiquitination and degradation. Mol Cell Biol (2014) 0.75
Preparation of a highly active cell-free translation system from immature Xenopus laevis oocytes. Methods (2010) 0.75
Impaired binding of standard initiation factors eIF3b, eIF4G and eIF4B to domain V of the live-attenuated coxsackievirus B3 Sabin3-like IRES--alternatives for 5'UTR-related cardiovirulence mechanisms. Diagn Pathol (2013) 0.75
The Triticum Mosaic Virus 5' Leader Binds to Both eIF4G and eIFiso4G for Translation. PLoS One (2017) 0.75
Functional analysis of Kaposi's sarcoma-associated herpesvirus vFLIP expression reveals a new mode of IRES-mediated translation. RNA (2014) 0.75
PCBP2 enables the cadicivirus IRES to exploit the function of a conserved GRNA tetraloop to enhance ribosomal initiation complex formation. Nucleic Acids Res (2016) 0.75
N1-methyl-pseudouridine in mRNA enhances translation through eIF2α-dependent and independent mechanisms by increasing ribosome density. Nucleic Acids Res (2017) 0.75
The mechanism of eukaryotic translation initiation and principles of its regulation. Nat Rev Mol Cell Biol (2010) 11.19
Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA. Genes Dev (2003) 2.89
Release of initiation factors from 48S complexes during ribosomal subunit joining and the link between establishment of codon-anticodon base-pairing and hydrolysis of eIF2-bound GTP. Genes Dev (2004) 2.88
Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing. Genes Dev (2003) 2.77
In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3. Cell (2006) 2.62
Recycling of eukaryotic posttermination ribosomal complexes. Cell (2007) 2.57
Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes. EMBO J (2008) 2.26
Specific functional interactions of nucleotides at key -3 and +4 positions flanking the initiation codon with components of the mammalian 48S translation initiation complex. Genes Dev (2006) 2.18
The role of ABCE1 in eukaryotic posttermination ribosomal recycling. Mol Cell (2010) 2.14
Translation initiation on mammalian mRNAs with structured 5'UTRs requires DExH-box protein DHX29. Cell (2008) 2.11
Binding of eukaryotic initiation factor 3 to ribosomal 40S subunits and its role in ribosomal dissociation and anti-association. RNA (2005) 1.99
The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH. EMBO J (2005) 1.96
Hepatitis-C-virus-like internal ribosome entry sites displace eIF3 to gain access to the 40S subunit. Nature (2013) 1.95
Dissociation by Pelota, Hbs1 and ABCE1 of mammalian vacant 80S ribosomes and stalled elongation complexes. EMBO J (2011) 1.76
eIF2-dependent and eIF2-independent modes of initiation on the CSFV IRES: a common role of domain II. EMBO J (2008) 1.71
Structure of the mammalian ribosomal 43S preinitiation complex bound to the scanning factor DHX29. Cell (2013) 1.68
Translation initiation by factor-independent binding of eukaryotic ribosomes to internal ribosomal entry sites. C R Biol (2005) 1.65
Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing. Nucleic Acids Res (2009) 1.61
Structural insights into eRF3 and stop codon recognition by eRF1. Genes Dev (2009) 1.57
Direct functional interaction of initiation factor eIF4G with type 1 internal ribosomal entry sites. Proc Natl Acad Sci U S A (2009) 1.54
Position of the CrPV IRES on the 40S subunit and factor dependence of IRES/80S ribosome assembly. EMBO Rep (2004) 1.53
Termination and post-termination events in eukaryotic translation. Adv Protein Chem Struct Biol (2012) 1.53
Activities of Ligatin and MCT-1/DENR in eukaryotic translation initiation and ribosomal recycling. Genes Dev (2010) 1.52
Initiation factor eIF5B catalyzes second GTP-dependent step in eukaryotic translation initiation. Proc Natl Acad Sci U S A (2002) 1.47
Dendritic BC1 RNA in translational control mechanisms. J Cell Biol (2005) 1.45
Mapping the binding interface between human eukaryotic initiation factors 1A and 5B: a new interaction between old partners. Proc Natl Acad Sci U S A (2003) 1.41
Eukaryotic initiation factors 4G and 4A mediate conformational changes downstream of the initiation codon of the encephalomyocarditis virus internal ribosomal entry site. Mol Cell Biol (2003) 1.40
Reinitiation and other unconventional posttermination events during eukaryotic translation. Mol Cell (2013) 1.39
Kinetic analysis of interaction of eukaryotic release factor 3 with guanine nucleotides. J Biol Chem (2006) 1.37
The helicase protein DHX29 promotes translation initiation, cell proliferation, and tumorigenesis. Proc Natl Acad Sci U S A (2009) 1.34
Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors. Nucleic Acids Res (2011) 1.33
Position of eukaryotic initiation factor eIF5B on the 80S ribosome mapped by directed hydroxyl radical probing. EMBO J (2007) 1.31
Translational control by a small RNA: dendritic BC1 RNA targets the eukaryotic initiation factor 4A helicase mechanism. Mol Cell Biol (2008) 1.28
Distinct eRF3 requirements suggest alternate eRF1 conformations mediate peptide release during eukaryotic translation termination. Mol Cell (2008) 1.25
Bypassing of stems versus linear base-by-base inspection of mammalian mRNAs during ribosomal scanning. EMBO J (2010) 1.20
The mechanism of translation initiation on Type 1 picornavirus IRESs. EMBO J (2013) 1.12
Factor requirements for translation initiation on the Simian picornavirus internal ribosomal entry site. RNA (2007) 1.10
Inhibition of translation by IFIT family members is determined by their ability to interact selectively with the 5'-terminal regions of cap0-, cap1- and 5'ppp- mRNAs. Nucleic Acids Res (2013) 1.07
General RNA-binding proteins have a function in poly(A)-binding protein-dependent translation. EMBO J (2008) 1.06
Cryo-EM structure of the mammalian eukaryotic release factor eRF1-eRF3-associated termination complex. Proc Natl Acad Sci U S A (2012) 1.05
Cleavage of eukaryotic initiation factor eIF5B by enterovirus 3C proteases. Virology (2008) 1.03
Structure of the mammalian ribosomal pre-termination complex associated with eRF1.eRF3.GDPNP. Nucleic Acids Res (2013) 1.02
The mechanism of translation initiation on Aichivirus RNA mediated by a novel type of picornavirus IRES. EMBO J (2011) 1.01
Gut mucosal FOXP3+ regulatory CD4+ T cells and Nonregulatory CD4+ T cells are differentially affected by simian immunodeficiency virus infection in rhesus macaques. J Virol (2010) 0.99
In vitro reconstitution and biochemical characterization of translation initiation by internal ribosomal entry. Methods Enzymol (2007) 0.98
A distinct class of internal ribosomal entry site in members of the Kobuvirus and proposed Salivirus and Paraturdivirus genera of the Picornaviridae. J Virol (2011) 0.95
Roles of individual domains in the function of DHX29, an essential factor required for translation of structured mammalian mRNAs. Proc Natl Acad Sci U S A (2012) 0.91
Kinetic analysis of the interaction of guanine nucleotides with eukaryotic translation initiation factor eIF5B. Biochemistry (2007) 0.87
Improvement of an ultrasensitive human immunodeficiency virus type 1 real-time reverse transcriptase-polymerase chain reaction targeting the long terminal repeat region. Transfusion (2009) 0.84
Small molecule derails translation initiation. Nat Chem Biol (2006) 0.83
Translation mechanism and regulation: old players, new concepts. Meeting on translational control and non-coding RNA. EMBO Rep (2007) 0.83
Reconstitution of eukaryotic translation elongation in vitro following initiation by internal ribosomal entry. Methods (2005) 0.82
Coupled folding during translation initiation. Cell (2003) 0.82
Translation, interrupted. Nat Struct Mol Biol (2006) 0.77