Shantanu Chowdhury

Author PubWeight™ 34.66‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Genome-wide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation. Genome Res 2006 2.12
2 Genome-wide computational and expression analyses reveal G-quadruplex DNA motifs as conserved cis-regulatory elements in human and related species. J Med Chem 2008 1.64
3 QuadBase: genome-wide database of G4 DNA--occurrence and conservation in human, chimpanzee, mouse and rat promoters and 146 microbes. Nucleic Acids Res 2007 1.35
4 Metastases suppressor NM23-H2 interaction with G-quadruplex DNA within c-MYC promoter nuclease hypersensitive element induces c-MYC expression. Nucleic Acids Res 2008 1.34
5 Evidence of genome-wide G4 DNA-mediated gene expression in human cancer cells. Nucleic Acids Res 2009 1.28
6 Genome-wide analyses of recombination prone regions predict role of DNA structural motif in recombination. PLoS One 2009 1.14
7 Kinetic resolution of bimolecular hybridization versus intramolecular folding in nucleic acids by surface plasmon resonance: application to G-quadruplex/duplex competition in human c-myc promoter. Nucleic Acids Res 2005 1.07
8 Guanine quadruplex DNA structure restricts methylation of CpG dinucleotides genome-wide. Mol Biosyst 2010 1.06
9 Genome-wide study predicts promoter-G4 DNA motifs regulate selective functions in bacteria: radioresistance of D. radiodurans involves G4 DNA-mediated regulation. Nucleic Acids Res 2012 1.06
10 Zinc-finger transcription factors are associated with guanine quadruplex motifs in human, chimpanzee, mouse and rat promoters genome-wide. Nucleic Acids Res 2011 1.04
11 Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements. PLoS One 2013 1.04
12 Thermodynamics of i-tetraplex formation in the nuclease hypersensitive element of human c-myc promoter. Biochem Biophys Res Commun 2004 1.02
13 Genome-wide analysis predicts DNA structural motifs as nucleosome exclusion signals. Mol Biosyst 2009 1.02
14 Lung cancer biomarkers: State of the art. J Carcinog 2013 1.00
15 Hoechst 33258 binds to G-quadruplex in the promoter region of human c-myc. Biochem Biophys Res Commun 2003 0.95
16 Quadruplex-single nucleotide polymorphisms (Quad-SNP) influence gene expression difference among individuals. Nucleic Acids Res 2012 0.93
17 Tetraplex DNA transitions within the human c-myc promoter detected by multivariate curve resolution of fluorescence resonance energy transfer. Biochemistry 2005 0.92
18 Mechanisms of non-metastatic 2 (NME2)-mediated control of metastasis across tumor types. Naunyn Schmiedebergs Arch Pharmacol 2011 0.90
19 Quadruplex-duplex competition in the nuclease hypersensitive element of human c-myc promoter: C to T mutation in C-rich strand enhances duplex association. Biochem Biophys Res Commun 2005 0.90
20 A novel G-quadruplex motif modulates promoter activity of human thymidine kinase 1. FEBS J 2010 0.90
21 Nuclear localization and in situ DNA damage by Mycobacterium tuberculosis nucleoside-diphosphate kinase. J Biol Chem 2004 0.89
22 Nucleoside diphosphate kinase from Mycobacterium tuberculosis cleaves single strand DNA within the human c-myc promoter in an enzyme-catalyzed reaction. Nucleic Acids Res 2005 0.88
23 Genome-wide analysis reveals downregulation of miR-379/miR-656 cluster in human cancers. Biol Direct 2013 0.88
24 Comprehensive SNP scan of DNA repair and DNA damage response genes reveal multiple susceptibility loci conferring risk to tobacco associated leukoplakia and oral cancer. PLoS One 2013 0.84
25 Engineered reversal of drug resistance in cancer cells--metastases suppressor factors as change agents. Nucleic Acids Res 2013 0.83
26 Metastases suppressor NME2 associates with telomere ends and telomerase and reduces telomerase activity within cells. Nucleic Acids Res 2011 0.82
27 Conformational fluctuations in anthrax protective antigen: a possible role of calcium in the folding pathway of the protein. FEBS Lett 2003 0.82
28 Quadruplex-coupled kinetics distinguishes ligand binding between G4 DNA motifs. Biochemistry 2007 0.80
29 Molecular basis of recognition of quadruplexes human telomere and c-myc promoter by the putative anticancer agent sanguinarine. Biochim Biophys Acta 2013 0.80
30 Emerging trends in G-quadruplex biology--role in epigenetic and evolutionary events. Mol Biosyst 2013 0.80
31 Ellipticine binds to a human telomere sequence: an additional mode of action as a putative anticancer agent? Biochemistry 2013 0.80
32 Importance of the histidine ligand to coenzyme B12 in the reaction catalyzed by methylmalonyl-CoA mutase. J Biol Chem 2002 0.77
33 Tryptophan residue is essential for immunoreactivity of a diagnostically relevant peptide epitope of A. fumigatus. Mol Cell Biochem 2005 0.76
34 Inhibition of telomerase activity by NME2: impact on metastasis suppression? Naunyn Schmiedebergs Arch Pharmacol 2014 0.75