Epigenetic control of a transcription factor at the cross section of two antagonistic pathways.

PubWeight™: 1.18‹?› | Rank: Top 10%

🔗 View Article (PMID 17965588)

Published in Epigenetics on May 08, 2007

Authors

Raul Alvarez-Venegas1, Ayed Al Abdallat, Ming Guo, James R Alfano, Zoya Avramova

Author Affiliations

1: School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0660 , USA.

Articles citing this

Multiple exposures to drought 'train' transcriptional responses in Arabidopsis. Nat Commun (2012) 1.43

The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions. Plant Cell (2008) 1.35

WRKY transcription factors: Jack of many trades in plants. Plant Signal Behav (2014) 1.27

Arabidopsis histone methyltransferase SET DOMAIN GROUP8 mediates induction of the jasmonate/ethylene pathway genes in plant defense response to necrotrophic fungi. Plant Physiol (2010) 1.21

Autoimmunity in Arabidopsis acd11 is mediated by epigenetic regulation of an immune receptor. PLoS Pathog (2010) 1.14

Chromatin configuration as a battlefield in plant-bacteria interactions. Plant Physiol (2011) 0.97

Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes. Plant Cell (2011) 0.95

Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana. Plant Cell (2015) 0.95

Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice. Plant Cell (2013) 0.94

WRKY proteins: signaling and regulation of expression during abiotic stress responses. ScientificWorldJournal (2015) 0.93

Phosphatidylinositol 5-phosphate links dehydration stress to the activity of ARABIDOPSIS TRITHORAX-LIKE factor ATX1. PLoS One (2010) 0.90

The Arabidopsis chromatin modifier ATX1, the myotubularin-like AtMTM and the response to drought. Plant Signal Behav (2009) 0.89

WRKY Transcription Factors: Molecular Regulation and Stress Responses in Plants. Front Plant Sci (2016) 0.87

The Arabidopsis elongator complex subunit2 epigenetically regulates plant immune responses. Plant Cell (2013) 0.87

Go in for the kill. Virulence (2014) 0.85

New clues in the nucleus: transcriptional reprogramming in effector-triggered immunity. Front Plant Sci (2013) 0.85

Epigenetic regulation of gene responsiveness in Arabidopsis. Front Plant Sci (2014) 0.84

Monoubiquitination of histone 2B at the disease resistance gene locus regulates its expression and impacts immune responses in Arabidopsis. Plant Physiol (2014) 0.84

A Genome-Wide Chronological Study of Gene Expression and Two Histone Modifications, H3K4me3 and H3K9ac, during Developmental Leaf Senescence. Plant Physiol (2015) 0.83

The Arabidopsis transcription factor BRASSINOSTEROID INSENSITIVE1-ETHYL METHANESULFONATE-SUPPRESSOR1 is a direct substrate of MITOGEN-ACTIVATED PROTEIN KINASE6 and regulates immunity. Plant Physiol (2015) 0.83

Histone modifications do not play a major role in salicylate-mediated suppression of jasmonate-induced PDF1.2 gene expression. Commun Integr Biol (2008) 0.82

The hnRNP-Q protein LIF2 participates in the plant immune response. PLoS One (2014) 0.81

Chromatin versus pathogens: the function of epigenetics in plant immunity. Front Plant Sci (2015) 0.81

The Phaseolus vulgaris PvTRX1h gene regulates plant hormone biosynthesis in embryogenic callus from common bean. Front Plant Sci (2015) 0.81

Regulation by polycomb and trithorax group proteins in Arabidopsis. Arabidopsis Book (2010) 0.80

Over-expression of histone H3K4 demethylase gene JMJ15 enhances salt tolerance in Arabidopsis. Front Plant Sci (2014) 0.78

Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process. Front Plant Sci (2015) 0.77

A cytoplasm-specific activity encoded by the Trithorax-like ATX1 gene. Nucleic Acids Res (2011) 0.76

Nuclear processes associated with plant immunity and pathogen susceptibility. Brief Funct Genomics (2015) 0.76

JMJ704 positively regulates rice defense response against Xanthomonas oryzae pv. oryzae infection via reducing H3K4me2/3 associated with negative disease resistance regulators. BMC Plant Biol (2015) 0.76

Turnip vein clearing virus movement protein nuclear activity: Do Tobamovirus movement proteins play a role in immune response suppression? Plant Signal Behav (2015) 0.75

Identification of SET Domain-Containing Proteins in Gossypium raimondii and Their Response to High Temperature Stress. Sci Rep (2016) 0.75

Articles by these authors

Drosophila pink1 is required for mitochondrial function and interacts genetically with parkin. Nature (2006) 11.91

The Drosophila microRNA Mir-14 suppresses cell death and is required for normal fat metabolism. Curr Biol (2003) 11.23

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proc Natl Acad Sci U S A (2003) 5.62

The Parkinson's disease genes pink1 and parkin promote mitochondrial fission and/or inhibit fusion in Drosophila. Proc Natl Acad Sci U S A (2008) 5.43

Temporal activation of p53 by a specific MDM2 inhibitor is selectively toxic to tumors and leads to complete tumor growth inhibition. Proc Natl Acad Sci U S A (2008) 4.07

A synthetic maternal-effect selfish genetic element drives population replacement in Drosophila. Science (2007) 3.55

MicroRNAs and the regulation of cell death. Trends Genet (2004) 3.42

Genome-wide association study of esophageal squamous cell carcinoma in Chinese subjects identifies susceptibility loci at PLCE1 and C20orf54. Nat Genet (2010) 2.95

Compensatory proliferation induced by cell death in the Drosophila wing disc requires activity of the apical cell death caspase Dronc in a nonapoptotic role. Curr Biol (2004) 2.57

An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants. Nat Protoc (2008) 2.35

Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000. Proc Natl Acad Sci U S A (2002) 2.27

Pink1, Parkin, DJ-1 and mitochondrial dysfunction in Parkinson's disease. Curr Opin Neurobiol (2007) 2.22

A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity. Nature (2007) 2.19

EGFR and KRAS mutations in lung carcinoma: molecular testing by using cytology specimens. Cancer Cytopathol (2011) 2.19

SA-inducible Arabidopsis glutaredoxin interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. Plant J (2007) 2.04

Phytopathogen type III effector weaponry and their plant targets. Curr Opin Plant Biol (2008) 1.98

Genomic mining type III secretion system effectors in Pseudomonas syringae yields new picks for all TTSS prospectors. Trends Microbiol (2002) 1.94

ATX-1, an Arabidopsis homolog of trithorax, activates flower homeotic genes. Curr Biol (2003) 1.91

Pseudomonas syringae type III secretion system targeting signals and novel effectors studied with a Cya translocation reporter. J Bacteriol (2004) 1.90

Identification of Pseudomonas syringae type III effectors that can suppress programmed cell death in plants and yeast. Plant J (2004) 1.86

Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor. Proc Natl Acad Sci U S A (2002) 1.81

The Drosophila caspase Ice is important for many apoptotic cell deaths and for spermatid individualization, a nonapoptotic process. Development (2006) 1.78

Caspase-dependent cell death in Drosophila. Annu Rev Cell Dev Biol (2006) 1.73

SET-domain proteins of the Su(var)3-9, E(z) and trithorax families. Gene (2002) 1.71

ARABIDOPSIS TRITHORAX1 dynamically regulates FLOWERING LOCUS C activation via histone 3 lysine 4 trimethylation. Plant Cell (2008) 1.66

The Arabidopsis trithorax-like factor ATX1 functions in dehydration stress responses via ABA-dependent and ABA-independent pathways. Plant J (2011) 1.60

Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae. Mol Plant Microbe Interact (2005) 1.59

A Pseudomonas syringae pv. tomato DC3000 mutant lacking the type III effector HopQ1-1 is able to cause disease in the model plant Nicotiana benthamiana. Plant J (2007) 1.59

Leptin increases adult hippocampal neurogenesis in vivo and in vitro. J Biol Chem (2008) 1.59

A potent and orally active antagonist (SM-406/AT-406) of multiple inhibitor of apoptosis proteins (IAPs) in clinical development for cancer treatment. J Med Chem (2011) 1.58

Pseudomonas HopU1 modulates plant immune receptor levels by blocking the interaction of their mRNAs with GRP7. EMBO J (2013) 1.58

Plant targets for Pseudomonas syringae type III effectors: virulence targets or guarded decoys? Curr Opin Microbiol (2011) 1.58

Multiple apoptotic caspase cascades are required in nonapoptotic roles for Drosophila spermatid individualization. PLoS Biol (2003) 1.57

The Pseudomonas syringae HrpJ protein controls the secretion of type III translocator proteins and has a virulence role inside plant cells. Mol Microbiol (2012) 1.56

Disabling surveillance: bacterial type III secretion system effectors that suppress innate immunity. Cell Microbiol (2004) 1.51

The majority of the type III effector inventory of Pseudomonas syringae pv. tomato DC3000 can suppress plant immunity. Mol Plant Microbe Interact (2009) 1.50

Roles of the Drosophila LRRK2 homolog in Rab7-dependent lysosomal positioning. Hum Mol Genet (2011) 1.49

Methylation patterns of histone H3 Lys 4, Lys 9 and Lys 27 in transcriptionally active and inactive Arabidopsis genes and in atx1 mutants. Nucleic Acids Res (2005) 1.48

Multiple exposures to drought 'train' transcriptional responses in Arabidopsis. Nat Commun (2012) 1.43

The Arabidopsis homolog of trithorax, ATX1, binds phosphatidylinositol 5-phosphate, and the two regulate a common set of target genes. Proc Natl Acad Sci U S A (2006) 1.39

The Pseudomonas syringae type III-secreted protein HopPtoD2 possesses protein tyrosine phosphatase activity and suppresses programmed cell death in plants. Mol Microbiol (2003) 1.38

Loss-of-function analysis suggests that Omi/HtrA2 is not an essential component of the PINK1/PARKIN pathway in vivo. J Neurosci (2008) 1.36

The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions. Plant Cell (2008) 1.35

GacA, the response regulator of a two-component system, acts as a master regulator in Pseudomonas syringae pv. tomato DC3000 by controlling regulatory RNA, transcriptional activators, and alternate sigma factors. Mol Plant Microbe Interact (2003) 1.33

The small glycine-rich RNA binding protein AtGRP7 promotes floral transition in Arabidopsis thaliana. Plant J (2008) 1.30

Genotypic variants at 2q33 and risk of esophageal squamous cell carcinoma in China: a meta-analysis of genome-wide association studies. Hum Mol Genet (2012) 1.28

Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana. BMC Plant Biol (2010) 1.28

Activation of a COI1-dependent pathway in Arabidopsis by Pseudomonas syringae type III effectors and coronatine. Plant J (2004) 1.27

The Drosophila inhibitor of apoptosis (IAP) DIAP2 is dispensable for cell survival, required for the innate immune response to gram-negative bacterial infection, and can be negatively regulated by the reaper/hid/grim family of IAP-binding apoptosis inducers. J Biol Chem (2006) 1.27

Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis clement, and identifies novel coregulated genes. Mol Plant Microbe Interact (2006) 1.25

Blastomycosis: The great pretender can also be an opportunist. Initial clinical diagnosis and underlying diseases in 123 patients. Ann Diagn Pathol (2002) 1.25

Docetaxel down-regulates the expression of androgen receptor and prostate-specific antigen but not prostate-specific membrane antigen in prostate cancer cell lines: implications for PSA surrogacy. Prostate (2009) 1.23

The roles of kinases in familial Parkinson's disease. J Neurosci (2007) 1.22

The Arabidopsis homologs of trithorax (ATX1) and enhancer of zeste (CLF) establish 'bivalent chromatin marks' at the silent AGAMOUS locus. Nucleic Acids Res (2007) 1.20

Control of the papillomavirus early-to-late switch by differentially expressed SRp20. J Virol (2008) 1.20

Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A. Mol Plant Microbe Interact (2006) 1.19

Transthoracic fine-needle aspiration vs concurrent core needle biopsy in diagnosis of intrathoracic lesions: a retrospective comparison of diagnostic accuracy. Am J Clin Pathol (2006) 1.15

ubiquilin antagonizes presenilin and promotes neurodegeneration in Drosophila. Hum Mol Genet (2007) 1.13

The genetics of cell death: approaches, insights and opportunities in Drosophila. Nat Rev Genet (2004) 1.09

Analysis of Erwinia chrysanthemi EC16 pelE::uidA, pelL::uidA, and hrpN::uidA mutants reveals strain-specific atypical regulation of the Hrp type III secretion system. Mol Plant Microbe Interact (2004) 1.08

Engineering the genomes of wild insect populations: challenges, and opportunities provided by synthetic Medea selfish genetic elements. J Insect Physiol (2010) 1.05

Morphine decreases extracellular levels of glutamate in the anterior cingulate cortex: an in vivo microdialysis study in freely moving rats. Brain Res (2005) 1.04

Adiponectin is critical in determining susceptibility to depressive behaviors and has antidepressant-like activity. Proc Natl Acad Sci U S A (2012) 1.04

Viscoelastic properties of cell walls of single living plant cells determined by dynamic nanoindentation. J Exp Bot (2012) 1.04

The Pseudomonas syringae type III effector HopG1 targets mitochondria, alters plant development and suppresses plant innate immunity. Cell Microbiol (2009) 1.03

Nicotinamide overload may play a role in the development of type 2 diabetes. World J Gastroenterol (2009) 1.03

Immune activation, viral gene product expression and neurotoxicity in the HIV-1 transgenic rat. J Neuroimmunol (2012) 1.02

Adiponectin stimulates proliferation of adult hippocampal neural stem/progenitor cells through activation of p38 mitogen-activated protein kinase (p38MAPK)/glycogen synthase kinase 3β (GSK-3β)/β-catenin signaling cascade. J Biol Chem (2011) 1.01

Upregulation of p18Ink4c expression by oncogenic HPV E6 via p53-miR-34a pathway. Int J Cancer (2011) 1.01

Gain of the 3q26 region in cervicovaginal liquid-based pap preparations is associated with squamous intraepithelial lesions and squamous cell carcinoma. Gynecol Oncol (2008) 1.01

Dynamic and stable histone H3 methylation patterns at the Arabidopsis FLC and AP1 loci. Gene (2008) 1.00

Immunohistochemical characterization of subtypes of male breast carcinoma. Breast Cancer Res (2009) 1.00

Structure function analysis of an ADP-ribosyltransferase type III effector and its RNA-binding target in plant immunity. J Biol Chem (2011) 0.99

Structure-based design, synthesis, and biological evaluation of irreversible human rhinovirus 3C protease inhibitors. 8. Pharmacological optimization of orally bioavailable 2-pyridone-containing peptidomimetics. J Med Chem (2003) 0.99

Human papillomavirus genotyping and p16INK4a expression in cervical intraepithelial neoplasia of adolescents. Mod Pathol (2005) 0.99

Evaluation of UPlink-RSV: prototype rapid antigen test for detection of respiratory syncytial virus infection. Ann N Y Acad Sci (2007) 0.99

The HopPtoF locus of Pseudomonas syringae pv. tomato DC3000 encodes a type III chaperone and a cognate effector. Mol Plant Microbe Interact (2004) 0.99

The hrpK operon of Pseudomonas syringae pv. tomato DC3000 encodes two proteins secreted by the type III (Hrp) protein secretion system: HopB1 and HrpK, a putative type III translocator. J Bacteriol (2005) 0.98

Isolation and expression of the lysis genes of Actinomyces naeslundii phage Av-1. Appl Environ Microbiol (2006) 0.97

Strategy for analysis and screening of bioactive compounds in traditional Chinese medicines. J Chromatogr B Analyt Technol Biomed Life Sci (2004) 0.97

The ShcA protein is a molecular chaperone that assists in the secretion of the HopPsyA effector from the type III (Hrp) protein secretion system of Pseudomonas syringae. Mol Microbiol (2002) 0.97

Value of PAX8 and WT1 Immunostaining in Confirming the Ovarian Origin of Metastatic Carcinoma in Serous Effusion Specimens. Am J Clin Pathol (2012) 0.97

Origin of the bacterial SET domain genes: vertical or horizontal? Mol Biol Evol (2006) 0.97

Molecular insights into Parkinson's disease. Prog Mol Biol Transl Sci (2012) 0.95

Protein degradation in Parkinson disease revisited: it's complex. J Clin Invest (2009) 0.95

Saporin toxin-conjugated monoclonal antibody targeting prostate-specific membrane antigen has potent anticancer activity. Prostate (2010) 0.95

Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes. Plant Cell (2011) 0.95

Screening test results associated with cancer diagnoses in 287 women with cervical squamous cell carcinoma. Arch Pathol Lab Med (2012) 0.94

Cognitive and neural correlates of depression-like behaviour in socially defeated mice: an animal model of depression with cognitive dysfunction. Int J Neuropsychopharmacol (2010) 0.94

Plant immunity directly or indirectly restricts the injection of type III effectors by the Pseudomonas syringae type III secretion system. Plant Physiol (2010) 0.94

Stability of estrogen receptor status in breast carcinoma: a comparison between primary and metastatic tumors with regard to disease course and intervening systemic therapy. Cancer (2010) 0.93

Putative subunits of the maize origin of replication recognition complex ZmORC1-ZmORC5. Nucleic Acids Res (2003) 0.93

Genetic and epigenetic changes in lung carcinoma and their clinical implications. Mod Pathol (2011) 0.93

Pseudomonas syringae pv. syringae uses proteasome inhibitor syringolin A to colonize from wound infection sites. PLoS Pathog (2013) 0.92