Published in PLoS Comput Biol on October 01, 2007
Ten simple rules for writing research papers. PLoS Comput Biol (2014) 1.01
On the process of becoming a great scientist. PLoS Comput Biol (2008) 0.77
Ten simple rules for lifelong learning, according to Hamming. PLoS Comput Biol (2015) 0.75
Ten simple rules for getting published. PLoS Comput Biol (2005) 7.22
Ten simple rules for getting grants. PLoS Comput Biol (2006) 3.13
Ten simple rules for a successful collaboration. PLoS Comput Biol (2007) 3.12
Ten simple rules for making good oral presentations. PLoS Comput Biol (2007) 2.57
Ten simple rules for reviewers. PLoS Comput Biol (2006) 1.84
Ten simple rules for selecting a postdoctoral position. PLoS Comput Biol (2006) 1.77
Ten simple rules for a good poster presentation. PLoS Comput Biol (2007) 1.55
Hamming's "open doors" and group creativity as keys to scientific excellence: the example of Cambridge. Med Hypotheses (2007) 0.90
The Protein Data Bank. Acta Crystallogr D Biol Crystallogr (2002) 14.44
The Protein Data Bank: unifying the archive. Nucleic Acids Res (2002) 12.37
The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema. Nucleic Acids Res (2005) 7.81
The RCSB Protein Data Bank: redesigned web site and web services. Nucleic Acids Res (2010) 7.68
Ten simple rules for getting published. PLoS Comput Biol (2005) 7.22
The RCSB PDB information portal for structural genomics. Nucleic Acids Res (2006) 6.36
Simple scoring scheme for calculating the risk of acute coronary events based on the 10-year follow-up of the prospective cardiovascular Münster (PROCAM) study. Circulation (2002) 6.20
The RCSB Protein Data Bank: new resources for research and education. Nucleic Acids Res (2012) 5.73
BioLit: integrating biological literature with databases. Nucleic Acids Res (2008) 4.85
SuperTarget and Matador: resources for exploring drug-target relationships. Nucleic Acids Res (2007) 3.82
Ten simple rules for getting grants. PLoS Comput Biol (2006) 3.13
Ten simple rules for a successful collaboration. PLoS Comput Biol (2007) 3.12
BioJava: an open-source framework for bioinformatics in 2012. Bioinformatics (2012) 2.94
Drug discovery using chemical systems biology: identification of the protein-ligand binding network to explain the side effects of CETP inhibitors. PLoS Comput Biol (2009) 2.84
The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications. BMC Bioinformatics (2005) 2.60
Ten simple rules for making good oral presentations. PLoS Comput Biol (2007) 2.57
Structural evolution of the protein kinase-like superfamily. PLoS Comput Biol (2005) 2.48
Prediction of risk of coronary events in middle-aged men in the Prospective Cardiovascular Münster Study (PROCAM) using neural networks. Int J Epidemiol (2002) 2.48
Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments. Proc Natl Acad Sci U S A (2008) 2.44
Phylogeny determined by protein domain content. Proc Natl Acad Sci U S A (2005) 2.37
Drug discovery using chemical systems biology: repositioning the safe medicine Comtan to treat multi-drug and extensively drug resistant tuberculosis. PLoS Comput Biol (2009) 2.35
Outcome of a workshop on archiving structural models of biological macromolecules. Structure (2006) 2.32
Drug discovery using chemical systems biology: weak inhibition of multiple kinases may contribute to the anti-cancer effect of nelfinavir. PLoS Comput Biol (2011) 2.31
Pre-calculated protein structure alignments at the RCSB PDB website. Bioinformatics (2010) 2.28
ElliPro: a new structure-based tool for the prediction of antibody epitopes. BMC Bioinformatics (2008) 2.26
Effects of combined arginine vasopressin and levosimendan on organ function in ovine septic shock. Crit Care Med (2010) 2.22
Open access: taking full advantage of the content. PLoS Comput Biol (2008) 2.14
Antibody-protein interactions: benchmark datasets and prediction tools evaluation. BMC Struct Biol (2007) 2.14
Immune epitope database analysis resource (IEDB-AR). Nucleic Acids Res (2008) 2.14
Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry. Proc Natl Acad Sci U S A (2006) 2.10
Immune epitope database analysis resource. Nucleic Acids Res (2012) 2.09
The Mycobacterium tuberculosis drugome and its polypharmacological implications. PLoS Comput Biol (2010) 2.07
Functional coverage of the human genome by existing structures, structural genomics targets, and homology models. PLoS Comput Biol (2005) 2.04
An ontology driven architecture for derived representations of macromolecular structure. Bioinformatics (2002) 1.97
Drug off-target effects predicted using structural analysis in the context of a metabolic network model. PLoS Comput Biol (2010) 1.97
Biodiversity data should be published, cited, and peer reviewed. Trends Ecol Evol (2013) 1.97
Are some categories of scientific publication more equal than others? On the ambiguous use of the label "original work". Med Hypotheses (2008) 1.92
Ten simple rules for reviewers. PLoS Comput Biol (2006) 1.84
Importance of arterial pulse pressure as a predictor of coronary heart disease risk in PROCAM. Eur Heart J (2005) 1.78
Ten simple rules for selecting a postdoctoral position. PLoS Comput Biol (2006) 1.77
Novel computational approaches to polypharmacology as a means to define responses to individual drugs. Annu Rev Pharmacol Toxicol (2011) 1.76
History of biological metal utilization inferred through phylogenomic analysis of protein structures. Proc Natl Acad Sci U S A (2010) 1.71
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand binding sites. BMC Bioinformatics (2007) 1.70
Silver-coated megaendoprostheses in a rabbit model--an analysis of the infection rate and toxicological side effects. Biomaterials (2004) 1.69
PROMISCUOUS: a database for network-based drug-repositioning. Nucleic Acids Res (2010) 1.69
Lack of toxicological side-effects in silver-coated megaprostheses in humans. Biomaterials (2007) 1.66
Computational biology resources lack persistence and usability. PLoS Comput Biol (2008) 1.65
CE-MC: a multiple protein structure alignment server. Nucleic Acids Res (2004) 1.64
Topic pages: PLoS Computational Biology meets Wikipedia. PLoS Comput Biol (2012) 1.60
Cell aggregation: a mechanism of pathogenic Leptospira to survive in fresh water. Int Microbiol (2004) 1.57
Quantifying reproducibility in computational biology: the case of the tuberculosis drugome. PLoS One (2013) 1.56
Ten simple rules for a good poster presentation. PLoS Comput Biol (2007) 1.55
Partitioning protein structures into domains: why is it so difficult? J Mol Biol (2006) 1.51
Biocurators: contributors to the world of science. PLoS Comput Biol (2006) 1.46
A unified statistical model to support local sequence order independent similarity searching for ligand-binding sites and its application to genome-based drug discovery. Bioinformatics (2009) 1.46
Early multiple organ failure after recurrent endotoxemia in the presence of vasoconstrictor-masked hypovolemia. Crit Care Med (2003) 1.46
Production of type VI collagen by human macrophages: a new dimension in macrophage functional heterogeneity. J Immunol (2008) 1.45
Implications of emerging risk factors for therapeutic intervention. Nutr Metab Cardiovasc Dis (2005) 1.43
Toward consistent assignment of structural domains in proteins. J Mol Biol (2004) 1.42
In silico elucidation of the molecular mechanism defining the adverse effect of selective estrogen receptor modulators. PLoS Comput Biol (2007) 1.40
Intrinsic evaluation of text mining tools may not predict performance on realistic tasks. Pac Symp Biocomput (2008) 1.40
Randomised trial of magnesium in the treatment of Irukandji syndrome. Emerg Med Australas (2012) 1.39
Ten simple rules for starting a company. PLoS Comput Biol (2012) 1.39
Harmonizing the definition of the metabolic syndrome: comparison of the criteria of the Adult Treatment Panel III and the International Diabetes Federation in United States American and European populations. Am J Cardiol (2007) 1.38
Curation of complex, context-dependent immunological data. BMC Bioinformatics (2006) 1.36
GTPase-activating proteins for Cdc42. Eukaryot Cell (2002) 1.35
Teaching bioinformatics at the secondary school level. PLoS Comput Biol (2011) 1.34
Superimpose: a 3D structural superposition server. Nucleic Acids Res (2008) 1.31
Plasma sitosterol elevations are associated with an increased incidence of coronary events in men: results of a nested case-control analysis of the Prospective Cardiovascular Münster (PROCAM) study. Nutr Metab Cardiovasc Dis (2005) 1.30
SuperTarget goes quantitative: update on drug-target interactions. Nucleic Acids Res (2011) 1.29
Extracellular matrix metalloproteinase inducer (CD147) is a novel receptor on platelets, activates platelets, and augments nuclear factor kappaB-dependent inflammation in monocytes. Circ Res (2007) 1.27
Ten simple rules for organizing a scientific meeting. PLoS Comput Biol (2008) 1.26
Structure-based systems biology for analyzing off-target binding. Curr Opin Struct Biol (2011) 1.25
Integration of open access literature into the RCSB Protein Data Bank using BioLit. BMC Bioinformatics (2010) 1.22
Peer reviewers can meet journals' criteria for authorship. BMJ (2013) 1.20
Response to Conroy et al. SCORE Project. Eur Heart J (2003) 1.20
A multidimensional strategy to detect polypharmacological targets in the absence of structural and sequence homology. PLoS Comput Biol (2010) 1.19
Effect of the interleukin-6 promoter polymorphism (-174 G/C) on the incidence and outcome of sepsis. Crit Care Med (2002) 1.16
A biologist's guide to synchrotron facilities: the BioSync web resource. Trends Biochem Sci (2002) 1.15
An ontology for immune epitopes: application to the design of a broad scope database of immune reactivities. Immunome Res (2005) 1.15
Exploiting sequence and structure homologs to identify protein-protein binding sites. Proteins (2006) 1.14
BLASTing proteomes, yielding phylogenies. In Silico Biol (2003) 1.12
EpitopeViewer: a Java application for the visualization and analysis of immune epitopes in the Immune Epitope Database and Analysis Resource (IEDB). Immunome Res (2007) 1.10
The evolutionary history of protein domains viewed by species phylogeny. PLoS One (2009) 1.09
Nothing about protein structure classification makes sense except in the light of evolution. Curr Opin Struct Biol (2009) 1.07
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction. BMC Bioinformatics (2006) 1.05
Light at night, chronodisruption, melatonin suppression, and cancer risk: a review. Crit Rev Oncog (2007) 1.05
Ten simple rules for graduate students. PLoS Comput Biol (2007) 1.04
Wiggle-predicting functionally flexible regions from primary sequence. PLoS Comput Biol (2006) 1.03
A machine learning-based method to improve docking scoring functions and its application to drug repurposing. J Chem Inf Model (2011) 1.03
Cytokine plasma levels: reliable predictors for radiation pneumonitis? PLoS One (2008) 1.02
Structural analysis of polarizing indels: an emerging consensus on the root of the tree of life. Biol Direct (2009) 1.01
SMAP-WS: a parallel web service for structural proteome-wide ligand-binding site comparison. Nucleic Acids Res (2010) 1.00
Light-mediated perturbations of circadian timing and cancer risk: a mechanistic analysis. Integr Cancer Ther (2009) 0.99
Light, clocks, mood, and cancer: consolidation and novel tests of latitude and instability hypotheses. Chronobiol Int (2011) 0.98
Type 2 diabetes mellitus and risk of coronary heart disease: results of the 10-year follow-up of the PROCAM study. Eur J Cardiovasc Prev Rehabil (2007) 0.98
Statistically rigorous automated protein annotation. Bioinformatics (2004) 0.97
Cell surface localization of ABCG1 does not require LXR activation. Arterioscler Thromb Vasc Biol (2006) 0.96
Temperature effects on box jellyfish venom: a possible treatment for envenomed patients? Med J Aust (2002) 0.96