Published in Plant Cell Environ on December 10, 2007
Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks. J Exp Bot (2012) 3.31
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Molecular basis of plant cold acclimation: insights gained from studying the CBF cold response pathway. Plant Physiol (2010) 2.00
Principal transcriptional programs regulating plant amino acid metabolism in response to abiotic stresses. Plant Physiol (2008) 1.58
Arabidopsis plants acclimate to water deficit at low cost through changes of carbon usage: an integrated perspective using growth, metabolite, enzyme, and gene expression analysis. Plant Physiol (2010) 1.46
Alternative oxidase: a mitochondrial respiratory pathway to maintain metabolic and signaling homeostasis during abiotic and biotic stress in plants. Int J Mol Sci (2013) 1.34
Global transcriptome profiles of Camellia sinensis during cold acclimation. BMC Genomics (2013) 1.31
Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism. Plant J (2010) 1.27
The trehalose 6-phosphate/SnRK1 signaling pathway primes growth recovery following relief of sink limitation. Plant Physiol (2013) 1.16
Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana. Genome Biol (2008) 1.15
Mutations in the Arabidopsis homolog of LST8/GβL, a partner of the target of Rapamycin kinase, impair plant growth, flowering, and metabolic adaptation to long days. Plant Cell (2012) 1.05
Granger causality in integrated GC-MS and LC-MS metabolomics data reveals the interface of primary and secondary metabolism. Metabolomics (2012) 1.04
Regulation of Leaf Starch Degradation by Abscisic Acid Is Important for Osmotic Stress Tolerance in Plants. Plant Cell (2016) 1.00
Integration of genome-scale modeling and transcript profiling reveals metabolic pathways underlying light and temperature acclimation in Arabidopsis. Plant Cell (2013) 0.97
Metabolism and growth in Arabidopsis depend on the daytime temperature but are temperature-compensated against cool nights. Plant Cell (2012) 0.91
Adaptation of maize source leaf metabolism to stress related disturbances in carbon, nitrogen and phosphorus balance. BMC Genomics (2013) 0.91
Temporal changes in allocation and partitioning of new carbon as (11)C elicited by simulated herbivory suggest that roots shape aboveground responses in Arabidopsis. Plant Physiol (2012) 0.90
Regulation of gene expression by chromosome 5A during cold hardening in wheat. Mol Genet Genomics (2010) 0.89
Chilling acclimation provides immunity to stress by altering regulatory networks and inducing genes with protective functions in cassava. BMC Plant Biol (2014) 0.87
Transcriptional profiling of an Fd-GOGAT1/GLU1 mutant in Arabidopsis thaliana reveals a multiple stress response and extensive reprogramming of the transcriptome. BMC Genomics (2010) 0.87
Phenotypic and metabolic responses to drought and salinity of four contrasting lentil accessions. J Exp Bot (2015) 0.86
Drought-Induced Leaf Proteome Changes in Switchgrass Seedlings. Int J Mol Sci (2016) 0.82
Dose-dependent effects of higher methionine levels on the transcriptome and metabolome of transgenic Arabidopsis seeds. Plant Cell Rep (2016) 0.81
Giving drought the cold shoulder: a relationship between drought tolerance and fall dormancy in an agriculturally important crop. AoB Plants (2014) 0.80
Use of the growing environment as a source of variation to identify the quantitative trait transcripts and modules of co-expressed genes that determine chlorogenic acid accumulation. Plant Cell Environ (2010) 0.80
Understanding salinity responses and adopting 'omics-based' approaches to generate salinity tolerant cultivars of rice. Front Plant Sci (2015) 0.79
Transcriptome, carbohydrate, and phytohormone analysis of Petunia hybrida reveals a complex disturbance of plant functional integrity under mild chilling stress. Front Plant Sci (2015) 0.78
A bulk segregant gene expression analysis of a peach population reveals components of the underlying mechanism of the fruit cold response. PLoS One (2014) 0.78
Insights from the Cold Transcriptome and Metabolome of Dendrobium officinale: Global Reprogramming of Metabolic and Gene Regulation Networks during Cold Acclimation. Front Plant Sci (2016) 0.77
Metabolite changes in conifer buds and needles during forced bud break in Norway spruce (Picea abies) and European silver fir (Abies alba). Front Plant Sci (2014) 0.77
Comparative transcriptomics of rice plants under cold, iron, and salt stresses. Funct Integr Genomics (2016) 0.77
Overexpression of the OsIMP Gene Increases the Accumulation of Inositol and Confers Enhanced Cold Tolerance in Tobacco through Modulation of the Antioxidant Enzymes' Activities. Genes (Basel) (2017) 0.76
Physiological and Transcriptome Responses to Combinations of Elevated CO2 and Magnesium in Arabidopsis thaliana. PLoS One (2016) 0.76
Differential Metabolic Rearrangements after Cold Storage Are Correlated with Chilling Injury Resistance of Peach Fruits. Front Plant Sci (2016) 0.75
Integrative "omic" analysis reveals distinctive cold responses in leaves and roots of strawberry, Fragaria × ananassa 'Korona'. Front Plant Sci (2015) 0.75
Mathematical modelling of diurnal regulation of carbohydrate allocation by osmo-related processes in plants. J R Soc Interface (2015) 0.75
Metabolic changes in Avena sativa crowns recovering from freezing. PLoS One (2014) 0.75
Genome-Wide Identification and Analysis of Genes, Conserved between japonica and indica Rice Cultivars, that Respond to Low-Temperature Stress at the Vegetative Growth Stage. Front Plant Sci (2017) 0.75
The worldwide leaf economics spectrum. Nature (2004) 20.42
MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J (2004) 15.51
Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol (2005) 15.10
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res (2012) 7.48
GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics (2004) 7.33
Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J (2004) 6.58
Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol (2004) 4.99
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. Plant Physiol (2005) 4.34
PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants. Plant Physiol (2006) 4.33
Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis. Plant Cell (2005) 4.13
Coordination of carbon supply and plant growth. Plant Cell Environ (2007) 3.63
Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana. Biochem J (2006) 3.36
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics (2006) 3.34
Assessing the generality of global leaf trait relationships. New Phytol (2005) 3.10
Avoiding bias in calculations of relative growth rate. Ann Bot (2002) 2.92
Steps towards an integrated view of nitrogen metabolism. J Exp Bot (2002) 2.84
A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell Environ (2009) 2.77
Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus. Plant Cell Environ (2007) 2.71
Genomic and metabolic prediction of complex heterotic traits in hybrid maize. Nat Genet (2012) 2.70
The interdependence of mechanisms underlying climate-driven vegetation mortality. Trends Ecol Evol (2011) 2.67
Regulation of flowering by trehalose-6-phosphate signaling in Arabidopsis thaliana. Science (2013) 2.66
ADP-glucose pyrophosphorylase is activated by posttranslational redox-modification in response to light and to sugars in leaves of Arabidopsis and other plant species. Plant Physiol (2003) 2.55
Circadian control of carbohydrate availability for growth in Arabidopsis plants at night. Proc Natl Acad Sci U S A (2010) 2.52
Pyrimidine and purine biosynthesis and degradation in plants. Annu Rev Plant Biol (2006) 2.48
Starch as a major integrator in the regulation of plant growth. Proc Natl Acad Sci U S A (2009) 2.47
Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. Plant Physiol (2008) 2.43
Starch synthesis in potato tubers is regulated by post-translational redox modification of ADP-glucose pyrophosphorylase: a novel regulatory mechanism linking starch synthesis to the sucrose supply. Plant Cell (2002) 2.40
Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes. Genome Biol (2006) 2.25
Specific leaf area and dry matter content estimate thickness in laminar leaves. Ann Bot (2005) 2.15
Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods. Plant Cell Environ (2009) 2.14
Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. Plant J (2007) 2.09
Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system. Plant J (2002) 2.08
Reprogramming a maize plant: transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis. Plant J (2008) 1.94
Water deficits uncouple growth from photosynthesis, increase C content, and modify the relationships between C and growth in sink organs. J Exp Bot (2011) 1.87
The Janus face of ethylene: growth inhibition and stimulation. Trends Plant Sci (2006) 1.86
Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. Mol Syst Biol (2009) 1.86
Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function. Plant J (2007) 1.84
No evidence for substantial aerobic methane emission by terrestrial plants: a 13C-labelling approach. New Phytol (2007) 1.83
Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis. Plant Physiol (2010) 1.82
Sarcosine in prostate cancer tissue is not a differential metabolite for prostate cancer aggressiveness and biochemical progression. J Urol (2010) 1.82
Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions. Mol Plant (2010) 1.75
Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools. Plant Physiol (2008) 1.73
Variation of enzyme activities and metabolite levels in 24 Arabidopsis accessions growing in carbon-limited conditions. Plant Physiol (2006) 1.72
Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environ (2013) 1.69
Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize. Proc Natl Acad Sci U S A (2012) 1.61
Recommendations for reporting metabolite data. Plant Cell (2011) 1.61
The effects of phenotypic plasticity and local adaptation on forecasts of species range shifts under climate change. Ecol Lett (2014) 1.57
Reduced expression of aconitase results in an enhanced rate of photosynthesis and marked shifts in carbon partitioning in illuminated leaves of wild species tomato. Plant Physiol (2003) 1.52
The role of raffinose in the cold acclimation response of Arabidopsis thaliana. FEBS Lett (2004) 1.52
Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Mol Biol (2006) 1.52
Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell Environ (2014) 1.51
Arabidopsis plants acclimate to water deficit at low cost through changes of carbon usage: an integrated perspective using growth, metabolite, enzyme, and gene expression analysis. Plant Physiol (2010) 1.46
Increased leaf size: different means to an end. Plant Physiol (2010) 1.45
Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. Plant Cell (2010) 1.41
Malate plays a crucial role in starch metabolism, ripening, and soluble solid content of tomato fruit and affects postharvest softening. Plant Cell (2011) 1.40
Next generation of elevated [CO2] experiments with crops: a critical investment for feeding the future world. Plant Cell Environ (2008) 1.39
Trehalose metabolism in plants. Plant J (2014) 1.39
Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit. Mol Syst Biol (2012) 1.38
Circadian control of root elongation and C partitioning in Arabidopsis thaliana. Plant Cell Environ (2011) 1.37
Metabolic fluxes in an illuminated Arabidopsis rosette. Plant Cell (2013) 1.36
Regulation of secondary metabolism by the carbon-nitrogen status in tobacco: nitrate inhibits large sectors of phenylpropanoid metabolism. Plant J (2006) 1.35
Blue light dose-responses of leaf photosynthesis, morphology, and chemical composition of Cucumis sativus grown under different combinations of red and blue light. J Exp Bot (2010) 1.34