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1
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Ancestral polyploidy in seed plants and angiosperms.
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Nature
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2011
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7.00
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2
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Darwin's abominable mystery: Insights from a supertree of the angiosperms.
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Proc Natl Acad Sci U S A
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2004
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5.41
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3
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Rapid and accurate pyrosequencing of angiosperm plastid genomes.
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BMC Plant Biol
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2006
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4.85
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4
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Polyploidy and angiosperm diversification.
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Am J Bot
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2009
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4.41
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5
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Widespread genome duplications throughout the history of flowering plants.
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Genome Res
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2006
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4.07
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6
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The age and diversification of the angiosperms re-revisited.
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Am J Bot
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2010
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3.95
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7
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Angiosperm phylogeny based on matK sequence information.
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Am J Bot
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2003
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3.80
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8
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Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms.
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Proc Natl Acad Sci U S A
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2007
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3.55
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9
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Angiosperm phylogeny: 17 genes, 640 taxa.
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Am J Bot
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2011
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3.54
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10
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Genome-scale data, angiosperm relationships, and "ending incongruence": a cautionary tale in phylogenetics.
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Trends Plant Sci
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2004
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3.53
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11
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Evolutionary genetics of genome merger and doubling in plants.
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Annu Rev Genet
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2008
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3.45
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12
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Comparative phylogeography of unglaciated eastern North America.
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Mol Ecol
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2006
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3.22
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13
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Rosid radiation and the rapid rise of angiosperm-dominated forests.
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Proc Natl Acad Sci U S A
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2009
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3.22
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14
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Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots.
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Proc Natl Acad Sci U S A
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2010
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3.21
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15
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Comparison of next generation sequencing technologies for transcriptome characterization.
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BMC Genomics
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2009
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2.60
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16
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Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA).
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OMICS
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2006
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2.57
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17
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Evolution of genome size in the angiosperms.
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Am J Bot
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2003
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2.01
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18
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The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history.
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Genetics
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2005
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1.95
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19
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Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant.
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Curr Biol
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2011
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1.94
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20
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The root of the angiosperms revisited.
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Proc Natl Acad Sci U S A
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2002
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1.93
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21
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A genome triplication associated with early diversification of the core eudicots.
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Genome Biol
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2012
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1.80
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22
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Gunnerales are sister to other core eudicots: implications for the evolution of pentamery.
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Am J Bot
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2003
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1.68
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23
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The age of the angiosperms: a molecular timescale without a clock.
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Evolution
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2005
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1.65
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24
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Origin and early evolution of angiosperms.
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Ann N Y Acad Sci
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2008
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1.65
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25
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From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes.
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BMC Evol Biol
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2014
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1.62
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26
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Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae).
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Proc Natl Acad Sci U S A
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2012
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1.62
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27
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Evolution and expression of homeologous loci in Tragopogon miscellus (Asteraceae), a recent and reciprocally formed allopolyploid.
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Genetics
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2006
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1.61
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28
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Phylogeny and domain evolution in the APETALA2-like gene family.
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Mol Biol Evol
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2005
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1.55
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29
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Floral gene resources from basal angiosperms for comparative genomics research.
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BMC Plant Biol
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2005
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1.54
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30
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Expression of floral MADS-box genes in basal angiosperms: implications for the evolution of floral regulators.
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Plant J
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2005
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1.44
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31
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Phylogeny and diversification of B-function MADS-box genes in angiosperms: evolutionary and functional implications of a 260-million-year-old duplication.
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Am J Bot
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2004
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1.43
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32
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Menispermaceae and the diversification of tropical rainforests near the Cretaceous-Paleogene boundary.
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New Phytol
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2012
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1.41
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33
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Rapid chromosome evolution in recently formed polyploids in Tragopogon (Asteraceae).
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PLoS One
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2008
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1.37
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34
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Rapid, repeated, and clustered loss of duplicate genes in allopolyploid plant populations of independent origin.
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Curr Biol
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2012
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1.37
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35
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Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.
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Mol Ecol
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2010
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1.37
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36
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Resolving an ancient, rapid radiation in Saxifragales.
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Syst Biol
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2008
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1.32
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37
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Assembly and validation of the genome of the nonmodel basal angiosperm Amborella.
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Science
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2013
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1.31
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38
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Missing links: the genetic architecture of flowers [correction of flower] and floral diversification.
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Trends Plant Sci
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2002
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1.29
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39
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Are polyploids really evolutionary dead-ends (again)? A critical reappraisal of Mayrose et al. ().
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New Phytol
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2014
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1.29
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40
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The role of phylogenetics in comparative genetics.
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Plant Physiol
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2003
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1.25
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41
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Molecular data place Hydnoraceae with Aristolochiaceae.
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Am J Bot
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2002
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1.25
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42
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Molecular cytogenetic analysis of recently evolved Tragopogon (Asteraceae) allopolyploids reveal a karyotype that is additive of the diploid progenitors.
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Am J Bot
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2004
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1.23
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43
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Another look at the root of the angiosperms reveals a familiar tale.
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Syst Biol
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2014
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1.21
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44
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Dynamics of polyploid formation in Tragopogon (Asteraceae): recurrent formation, gene flow, and population structure.
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Evolution
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2010
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1.20
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45
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Amborella not a "basal angiosperm"? Not so fast.
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Am J Bot
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2004
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1.20
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46
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Phylogeny of seed plants based on evidence from eight genes.
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Am J Bot
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2002
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1.19
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47
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Phylogenetic relationships and character evolution analysis of Saxifragales using a supermatrix approach.
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Am J Bot
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2013
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1.18
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48
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Corrigendum: Three keys to the radiation of angiosperms into freezing environments.
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Nature
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2015
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1.14
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49
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The ABC model and its applicability to basal angiosperms.
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Ann Bot
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2007
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1.13
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50
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Homeolog loss and expression changes in natural populations of the recently and repeatedly formed allotetraploid Tragopogon mirus (Asteraceae).
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BMC Genomics
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2010
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1.12
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51
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Comparative phylogeographic analyses illustrate the complex evolutionary history of threatened cloud forests of northern Mesoamerica.
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PLoS One
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2013
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1.11
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52
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Complex pigment evolution in the Caryophyllales.
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New Phytol
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2011
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1.11
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53
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Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirus.
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New Phytol
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2010
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1.11
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54
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Recent long-distance dispersal overshadows ancient biogeographical patterns in a pantropical angiosperm family (Simaroubaceae, Sapindales).
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Syst Biol
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2009
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1.09
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55
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On the road to diploidization? Homoeolog loss in independently formed populations of the allopolyploid Tragopogon miscellus (Asteraceae).
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BMC Plant Biol
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2009
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1.08
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56
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Concerted evolution of rDNA in recently formed Tragopogon allotetraploids is typically associated with an inverse correlation between gene copy number and expression.
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Genetics
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2007
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1.06
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57
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Phylogenetic relationships among early-diverging eudicots based on four genes: were the eudicots ancestrally woody?
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Mol Phylogenet Evol
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2004
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1.06
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58
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The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression.
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Trends Plant Sci
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2007
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1.03
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59
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Evolutionary biology for the 21st century.
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PLoS Biol
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2013
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1.01
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60
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Similar patterns of rDNA evolution in synthetic and recently formed natural populations of Tragopogon (Asteraceae) allotetraploids.
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BMC Evol Biol
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2010
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0.98
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61
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Relationships within Cornales and circumscription of Cornaceae-matK and rbcL sequence data and effects of outgroups and long branches.
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Mol Phylogenet Evol
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2002
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0.97
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62
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Next-generation sequencing and genome evolution in allopolyploids.
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Am J Bot
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2012
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0.97
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63
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Phylogeny reconstruction and functional constraints in organellar genomes: plastid atpB and rbcL sequences versus animal mitochondrion.
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Syst Biol
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2002
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0.97
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64
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Phylogeny of extant and fossil Juglandaceae inferred from the integration of molecular and morphological data sets.
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Syst Biol
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2007
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0.95
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65
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The Amborella genome: an evolutionary reference for plant biology.
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Genome Biol
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2008
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0.95
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66
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Does hybridization between divergent progenitors drive whole-genome duplication?
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Mol Ecol
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2009
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0.95
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67
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Towards a comprehensive integration of morphological and genetic studies of floral development.
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Trends Plant Sci
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2004
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0.94
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68
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Conservation and canalization of gene expression during angiosperm diversification accompany the origin and evolution of the flower.
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Proc Natl Acad Sci U S A
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2010
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0.94
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69
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Complete plastid genome sequencing of Trochodendraceae reveals a significant expansion of the inverted repeat and suggests a Paleogene divergence between the two extant species.
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PLoS One
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2013
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0.93
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70
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Synthetic polyploids of Tragopogon miscellus and T. mirus (Asteraceae): 60 Years after Ownbey's discovery.
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Am J Bot
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2009
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0.93
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71
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Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents.
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New Phytol
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2012
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0.93
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72
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A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure.
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Genome Biol
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2011
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0.93
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73
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Phylogenetic diversification of glycogen synthase kinase 3/SHAGGY-like kinase genes in plants.
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BMC Plant Biol
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2006
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0.89
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74
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Persea americana (avocado): bringing ancient flowers to fruit in the genomics era.
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Bioessays
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2008
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0.88
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75
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Microsatellite marker development for the federally listed Prunus geniculata (Rosaceae).
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Am J Bot
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2011
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0.88
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76
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Transcriptional signatures of ancient floral developmental genetics in avocado (Persea americana; Lauraceae).
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Proc Natl Acad Sci U S A
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2009
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0.87
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77
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Nonadditive gene expression in polyploids.
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Annu Rev Genet
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2014
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0.87
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78
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An assessment of karyotype restructuring in the neoallotetraploid Tragopogon miscellus (Asteraceae).
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Chromosome Res
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2013
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0.86
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79
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An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers.
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BMC Plant Biol
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2006
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0.86
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80
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DNA sequences from Miocene fossils: an ndhF sequence of Magnolia latahensis (Magnoliaceae) and an rbcL sequence of Persea pseudocarolinensis (Lauraceae).
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Am J Bot
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2004
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0.85
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81
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Natural hybrids between Tragopogon mirus and T. miscellus (Asteraceae): a new perspective on karyotypic changes following hybridization at the polyploid level.
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Am J Bot
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2013
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0.85
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82
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Reticulate evolution in the Acrolophus subgroup (Centaurea L., Compositae) from the western Mediterranean: origin and diversification of section Willkommia Blanca.
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Mol Phylogenet Evol
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2006
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0.84
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83
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Phylogeny of Opuntia s.s. (Cactaceae): clade delineation, geographic origins, and reticulate evolution.
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Am J Bot
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2012
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0.84
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84
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Molecular phylogeny, biogeography, and systematics of Dicerandra (Lamiaceae), a genus endemic to the southeastern United States.
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Am J Bot
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2007
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0.84
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85
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Gene silencing via DNA methylation in naturally occurring Tragopogon miscellus (Asteraceae) allopolyploids.
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BMC Genomics
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2014
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0.82
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86
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Do global diversity patterns of vertebrates reflect those of monocots?
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PLoS One
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2013
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0.82
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87
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The polyploid series of Centaurea toletana: glacial migrations and introgression revealed by nrDNA and cpDNA sequence analyzes.
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Mol Phylogenet Evol
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2009
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0.81
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88
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Microsatellite marker development for Galax urceolata (Diapensiaceae).
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Am J Bot
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2011
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0.81
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89
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Phylogeographical structure and temporal complexity in American sweetgum (Liquidambar styraciflua; Altingiaceae).
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Mol Ecol
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2008
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0.81
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90
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Evolutionary trends in the floral transcriptome: insights from one of the basalmost angiosperms, the water lily Nuphar advena (Nymphaeaceae).
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Plant J
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2010
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0.81
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91
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Phylogeny and evolutionary history of glycogen synthase kinase 3/SHAGGY-like kinase genes in land plants.
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BMC Evol Biol
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2013
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0.81
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92
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A conifer genome spruces up plant phylogenomics.
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Genome Biol
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2013
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0.80
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93
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'Living stones' reveal alternative petal identity programs within the core eudicots.
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Plant J
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2011
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0.80
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94
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Northern hemisphere biogeography of Cerastium (Caryophyllaceae): insights from phylogenetic analysis of noncoding plastidnucleotide sequences.
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Am J Bot
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2004
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0.79
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95
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Characterization of polymorphic microsatellite loci in Haageocereus (Trichocereeae, Cactaceae).
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Am J Bot
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2010
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0.78
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96
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Multiple origins and chromosomal novelty in the allotetraploid Tragopogon castellanus (Asteraceae).
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New Phytol
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2015
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0.78
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97
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Isolation and characterization of novel microsatellite markers for Arctium minus (Compositae).
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Am J Bot
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2010
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0.78
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98
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Plant reproductive genomics at the Plant and Animal Genome Conference.
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Comp Funct Genomics
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2005
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0.76
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99
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Cytogeography of the Humifusa clade of Opuntia s.s. Mill. 1754 (Cactaceae, Opuntioideae, Opuntieae): correlations with pleistocene refugia and morphological traits in a polyploid complex.
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Comp Cytogenet
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2012
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0.75
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100
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Genetic variability of an unusual apomictic triploid cactus--Haageocereus tenuis Ritter--from the Coast of Central Peru.
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J Hered
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2012
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0.75
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