Published in Trends Plant Sci on March 17, 2008
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol (2008) 2.73
Brachypodium as a model for the grasses: today and the future. Plant Physiol (2011) 1.93
The molecular biology of seasonal flowering-responses in Arabidopsis and the cereals. Ann Bot (2009) 1.70
Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response. BMC Genomics (2009) 1.62
Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv. Funct Integr Genomics (2009) 1.39
A protocol for Agrobacterium-mediated transformation of Brachypodium distachyon community standard line Bd21. Nat Protoc (2009) 1.34
A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics (2009) 1.30
Regulation of FLOWERING LOCUS T by a microRNA in Brachypodium distachyon. Plant Cell (2013) 1.28
The WRKY transcription factor family in Brachypodium distachyon. BMC Genomics (2012) 1.20
Turnover of fatty acids during natural senescence of Arabidopsis, Brachypodium, and switchgrass and in Arabidopsis beta-oxidation mutants. Plant Physiol (2009) 1.17
Environmental aridity is associated with cytotype segregation and polyploidy occurrence in Brachypodium distachyon (Poaceae). New Phytol (2011) 1.16
Interaction of photoperiod and vernalization determines flowering time of Brachypodium distachyon. Plant Physiol (2013) 1.13
Brachypodium distachyon grain: identification and subcellular localization of storage proteins. J Exp Bot (2010) 1.11
Endosperm development in Brachypodium distachyon. J Exp Bot (2010) 1.10
A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. J Exp Bot (2011) 1.08
Identification and characterization of NF-Y transcription factor families in the monocot model plant Brachypodium distachyon. PLoS One (2011) 1.03
Cell wall composition throughout development for the model grass Brachypodium distachyon. Front Plant Sci (2012) 1.02
Genome Wide Analysis of Nucleotide-Binding Site Disease Resistance Genes in Brachypodium distachyon. Comp Funct Genomics (2012) 1.02
Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis. Biotechnol Biofuels (2008) 1.01
The domestication syndrome genes responsible for the major changes in plant form in the Triticeae crops. Plant Cell Physiol (2011) 1.00
Compact genomes and complex evolution in the genus Brachypodium. Chromosoma (2010) 0.99
A protocol for efficiently retrieving and characterizing flanking sequence tags (FSTs) in Brachypodium distachyon T-DNA insertional mutants. Nat Protoc (2009) 0.95
Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass Brachypodium distachyon. PLoS One (2012) 0.92
Construction of high quality Gateway™ entry libraries and their application to yeast two-hybrid for the monocot model plant Brachypodium distachyon. BMC Biotechnol (2011) 0.90
Thermal stress effects on grain yield in Brachypodium distachyon occur via H2A.Z-nucleosomes. Genome Biol (2013) 0.89
The compact Brachypodium genome conserves centromeric regions of a common ancestor with wheat and rice. Funct Integr Genomics (2010) 0.88
Evaluating the microtubule cytoskeleton and its interacting proteins in monocots by mining the rice genome. Ann Bot (2008) 0.88
Comparative analysis of the cold acclimation and freezing tolerance capacities of seven diploid Brachypodium distachyon accessions. Ann Bot (2013) 0.87
Anther ontogeny in Brachypodium distachyon. Protoplasma (2014) 0.85
A DNA barcoding method to discriminate between the model plant Brachypodium distachyon and its close relatives B. stacei and B. hybridum (Poaceae). PLoS One (2012) 0.85
Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum. BMC Genomics (2014) 0.85
Systematic analysis and identification of stress-responsive genes of the NAC gene family in Brachypodium distachyon. PLoS One (2015) 0.84
Fine mapping and syntenic integration of the semi-dwarfing gene sdw3 of barley. Funct Integr Genomics (2010) 0.84
Centromeres cluster de novo at the beginning of meiosis in Brachypodium distachyon. PLoS One (2012) 0.83
Natural Variation in Brachypodium Links Vernalization and Flowering Time Loci as Major Flowering Determinants. Plant Physiol (2016) 0.82
Mutation in Brachypodium caffeic acid O-methyltransferase 6 alters stem and grain lignins and improves straw saccharification without deteriorating grain quality. J Exp Bot (2015) 0.82
A global profiling of uncapped mRNAs under cold stress reveals specific decay patterns and endonucleolytic cleavages in Brachypodium distachyon. Genome Biol (2013) 0.82
Identification and characterization of TIFY family genes in Brachypodium distachyon. J Plant Res (2015) 0.80
Genome-wide identification and expression analysis of the IQD gene family in moso bamboo (Phyllostachys edulis). Sci Rep (2016) 0.80
Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass. BMC Genomics (2016) 0.79
Ectopic Expression of WRINKLED1 Affects Fatty Acid Homeostasis in Brachypodium distachyon Vegetative Tissues. Plant Physiol (2015) 0.79
Duplication and diversification of the LEAFY HULL STERILE1 and Oryza sativa MADS5 SEPALLATA lineages in graminoid Poales. Evodevo (2012) 0.78
Targeting environmental adaptation in the monocot model Brachypodium distachyon: a multi-faceted approach. BMC Genomics (2014) 0.76
Linking Dynamic Phenotyping with Metabolite Analysis to Study Natural Variation in Drought Responses of Brachypodium distachyon. Front Plant Sci (2016) 0.75
Gene Overexpression Resources in Cereals for Functional Genomics and Discovery of Useful Genes. Front Plant Sci (2016) 0.75
In silico analysis of crop science: report on the first China-UK workshop on Chips, Computers and Crops. Genomics Proteomics Bioinformatics (2008) 0.75
Influence of rhizobacterial volatiles on the root system architecture and the production and allocation of biomass in the model grass Brachypodium distachyon (L.) P. Beauv. BMC Plant Biol (2015) 0.75
Ultrastructure of microsporogenesis and microgametogenesis in Brachypodium distachyon. Protoplasma (2015) 0.75
Morpho-histological, histochemical, and molecular evidences related to cellular reprogramming during somatic embryogenesis of the model grass Brachypodium distachyon. Protoplasma (2017) 0.75
Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon. BMC Genomics (2017) 0.75
Genome-wide survey of heat shock factors and heat shock protein 70s and their regulatory network under abiotic stresses in Brachypodium distachyon. PLoS One (2017) 0.75
Time-dependent leaf proteome alterations of Brachypodium distachyon in response to drought stress. Plant Mol Biol (2017) 0.75
Characterization of the LBD gene family in Brachypodium: a phylogenetic and transcriptional study. Plant Cell Rep (2016) 0.75
Evolutionary and biomedical insights from the rhesus macaque genome. Science (2007) 16.21
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature (2005) 7.74
The DNA sequence of the human X chromosome. Nature (2005) 6.97
The genome of the model beetle and pest Tribolium castaneum. Nature (2008) 6.50
The genome of the sea urchin Strongylocentrotus purpuratus. Science (2006) 6.41
Potential of metabolomics as a functional genomics tool. Trends Plant Sci (2004) 4.10
A proposed framework for the description of plant metabolomics experiments and their results. Nat Biotechnol (2004) 3.32
EB1 reveals mobile microtubule nucleation sites in Arabidopsis. Nat Cell Biol (2003) 2.75
The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol (2011) 2.74
The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci. Plant Cell (2010) 2.51
Arabidopsis reactome: a foundation knowledgebase for plant systems biology. Plant Cell (2008) 2.50
Plant transgenic science knowledge. Nat Biotechnol (2005) 2.16
Short-term safety and efficacy of a novel high tibial osteotomy system: a case controlled study. Knee Surg Sports Traumatol Arthrosc (2011) 2.15
A genetic framework for grain size and shape variation in wheat. Plant Cell (2010) 2.06
Comparison of electronic data capture (EDC) with the standard data capture method for clinical trial data. PLoS One (2011) 2.06
Brachypodium as a model for the grasses: today and the future. Plant Physiol (2011) 1.93
High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Plant J (2005) 1.87
Hierarchical metabolomics demonstrates substantial compositional similarity between genetically modified and conventional potato crops. Proc Natl Acad Sci U S A (2005) 1.75
Structural, luminescence, and NMR studies of the reversible binding of acetate, lactate, citrate, and selected amino acids to chiral diaqua ytterbium, gadolinium, and europium complexes. J Am Chem Soc (2002) 1.54
Metabolite signal identification in accurate mass metabolomics data with MZedDB, an interactive m/z annotation tool utilising predicted ionisation behaviour 'rules'. BMC Bioinformatics (2009) 1.44
Regulation of the pollen-specific actin-depolymerizing factor LlADF1. Plant Cell (2002) 1.40
T-type calcium channel blockers that attenuate thalamic burst firing and suppress absence seizures. Sci Transl Med (2012) 1.39
Controlling the variation of axial water exchange rates in macrocyclic lanthanide(III) complexes. Chem Commun (Camb) (2002) 1.38
Cell-penetrating metal complex optical probes: targeted and responsive systems based on lanthanide luminescence. Acc Chem Res (2009) 1.38
The ethanol switch: a tool for tissue-specific gene induction during plant development. Plant J (2003) 1.36
A protocol for Agrobacterium-mediated transformation of Brachypodium distachyon community standard line Bd21. Nat Protoc (2009) 1.34
Engineering emissive europium and terbium complexes for molecular imaging and sensing. Dalton Trans (2006) 1.33
Arabidopsis POT1A interacts with TERT-V(I8), an N-terminal splicing variant of telomerase. J Cell Sci (2007) 1.31
Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization. Genetics (2006) 1.28
The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato. Plant J (2010) 1.24
Systematic spatial analysis of gene expression during wheat caryopsis development. Plant Cell (2005) 1.23
Metabolomic analysis reveals a common pattern of metabolic re-programming during invasion of three host plant species by Magnaporthe grisea. Plant J (2009) 1.21
Rice blast infection of Brachypodium distachyon as a model system to study dynamic host/pathogen interactions. Nat Protoc (2008) 1.21
CycD1, a putative G1 cyclin from Antirrhinum majus, accelerates the cell cycle in cultured tobacco BY-2 cells by enhancing both G1/S entry and progression through S and G2 phases. Plant Cell (2004) 1.19
A europium complex that selectively stains nucleoli of cells. J Am Chem Soc (2006) 1.18
Laying the cytotaxonomic foundations of a new model grass, Brachypodium distachyon (L.) Beauv. Chromosome Res (2004) 1.17
Patellofemoral arthroplasty, where are we today? Knee Surg Sports Traumatol Arthrosc (2012) 1.17
UVR8 in Arabidopsis thaliana regulates multiple aspects of cellular differentiation during leaf development in response to ultraviolet B radiation. New Phytol (2009) 1.16
Evaluation of the cold-chain for oral polio vaccine in a rural district of India. Public Health Rep (2007) 1.16
In vivo quantification of blood flow and wall shear stress in the human abdominal aorta during lower limb exercise. Ann Biomed Eng (2002) 1.15
Ternary complexes between cationic GdIII chelates and anionic metabolites in aqueous solution: an NMR relaxometric study. Chemistry (2003) 1.15
Survey of factors determining the circularly polarised luminescence of macrocyclic lanthanide complexes in solution. Chirality (2002) 1.11
Importance of non-parabolic band effects in the thermoelectric properties of semiconductors. Sci Rep (2013) 1.11
Differential inhibition of T-type calcium channels by neuroleptics. J Neurosci (2002) 1.11
Endosperm development in Brachypodium distachyon. J Exp Bot (2010) 1.10
ENDOSPERM DEFECTIVE1 Is a Novel Microtubule-Associated Protein Essential for Seed Development in Arabidopsis. Plant Cell (2009) 1.09
Trends in GM crop, food and feed safety literature. Nat Biotechnol (2007) 1.09
High-throughput, nontargeted metabolite fingerprinting using nominal mass flow injection electrospray mass spectrometry. Nat Protoc (2008) 1.09
Microtubule-associated AIR9 recognizes the cortical division site at preprophase and cell-plate insertion. Curr Biol (2006) 1.09
Magnaporthe grisea interactions with the model grass Brachypodium distachyon closely resemble those with rice (Oryza sativa). Mol Plant Pathol (2004) 1.07
Magnetic conjugated polymer nanoparticles as bimodal imaging agents. J Am Chem Soc (2010) 1.07
The Department of Veterans Affairs, Department of Defense, and Kaiser Permanente Nationwide Health Information Network exchange in San Diego: patient selection, consent, and identity matching. AMIA Annu Symp Proc (2011) 1.07
Establishing standards for the assessment of suicide risk among callers to the national suicide prevention lifeline. Suicide Life Threat Behav (2007) 1.06
Pgp3 antibody enzyme-linked immunosorbent assay, a sensitive and specific assay for seroepidemiological analysis of Chlamydia trachomatis infection. Clin Vaccine Immunol (2009) 1.05
Design and analysis of DNA strand displacement devices using probabilistic model checking. J R Soc Interface (2012) 1.05
AtMAP70-5, a divergent member of the MAP70 family of microtubule-associated proteins, is required for anisotropic cell growth in Arabidopsis. J Cell Sci (2007) 1.03
Azaxanthones and azathioxanthones are effective sensitisers for europium and terbium luminescence. Org Biomol Chem (2006) 1.03
Predicting interpretability of metabolome models based on behavior, putative identity, and biological relevance of explanatory signals. Proc Natl Acad Sci U S A (2006) 1.02
Bone bruises associated with ACL rupture: correlation with injury mechanism. Am J Sports Med (2008) 1.02
Modulated targeting of GFP-AtMAP65-1 to central spindle microtubules during division. Plant J (2005) 1.02
Proline betaine and its biotransformation products in fasting urine samples are potential biomarkers of habitual citrus fruit consumption. Br J Nutr (2011) 1.02
Quantification of wall shear stress in large blood vessels using Lagrangian interpolation functions with cine phase-contrast magnetic resonance imaging. Ann Biomed Eng (2002) 1.01
A streamlined method for systematic, high resolution in situ analysis of mRNA distribution in plants. Plant Methods (2005) 1.00
Anion binding in water at lanthanide centres: from structure and selectivity to signalling and sensing. Chem Soc Rev (2012) 1.00
Preprocessing, classification modeling and feature selection using flow injection electrospray mass spectrometry metabolite fingerprint data. Nat Protoc (2008) 1.00
Design, synthesis and evaluation of ratiometric probes for hydrogencarbonate based on europium emission. Org Biomol Chem (2004) 0.99
Synthesis and characterisation of highly emissive and kinetically stable lanthanide complexes suitable for usage "in cellulo". Org Biomol Chem (2005) 0.99
The pCLEAN dual binary vector system for Agrobacterium-mediated plant transformation. Plant Physiol (2007) 0.99
Engineering controllable bidirectional molecular motors based on myosin. Nat Nanotechnol (2012) 0.97
Quantitative analysis of fragrance and odorants released from fresh and decaying strawberries. Sensors (Basel) (2013) 0.97
Effect of time since exposure to Chlamydia trachomatis on chlamydia antibody detection in women: a cross-sectional study. Sex Transm Infect (2013) 0.97
Distribution and characterization of more than 1000 T-DNA tags in the genome of Brachypodium distachyon community standard line Bd21. Plant Biotechnol J (2010) 0.96
Development of responsive lanthanide probes for cellular applications. Curr Opin Chem Biol (2009) 0.95
The Norwegian Labour Inspectorate's Registry for Work-Related Diseases: data from 2006. Int J Occup Environ Health (2008) 0.95
A protocol for efficiently retrieving and characterizing flanking sequence tags (FSTs) in Brachypodium distachyon T-DNA insertional mutants. Nat Protoc (2009) 0.95
T-DNA mutagenesis in Brachypodium distachyon. J Exp Bot (2011) 0.95
Cyclin-dependent kinase activity maintains the shoot apical meristem cells in an undifferentiated state. Plant J (2010) 0.95
Design principles and theory of paramagnetic fluorine-labelled lanthanide complexes as probes for (19)F magnetic resonance: a proof-of-concept study. Chemistry (2010) 0.93
The pot1+ homologue in Aspergillus nidulans is required for ordering mitotic events. J Cell Sci (2003) 0.93
Steric control of lanthanide hydration state: fast water exchange at gadolinium in a mono-amide 'DOTA' complex. Dalton Trans (2004) 0.93
Extending the absorbing boundary method to fit dwell-time distributions of molecular motors with complex kinetic pathways. Proc Natl Acad Sci U S A (2007) 0.93
Machine safety evaluation in small metal working facilities: an evaluation of inter-rater reliability in the quantification of machine-related hazards. Am J Ind Med (2005) 0.93
Use of mass spectrometry fingerprinting to identify urinary metabolites after consumption of specific foods. Am J Clin Nutr (2011) 0.92
Identification of a novel family of 70 kDa microtubule-associated proteins in Arabidopsis cells. Plant J (2005) 0.92
The role of MAP65-1 in microtubule bundling during Zinnia tracheary element formation. J Cell Sci (2006) 0.92
Glycoconjugates of gadolinium complexes for MRI applications. Chem Commun (Camb) (2006) 0.92
Maximum recovery after knee replacement--the MARKER study rationale and protocol. BMC Musculoskelet Disord (2009) 0.92
Profile of machine safety in small metal fabrication businesses. Am J Ind Med (2006) 0.92
Polyploidy-associated genomic instability in Arabidopsis thaliana. Genesis (2010) 0.92
19F NMR based pH probes: lanthanide(III) complexes with pH-sensitive chemical shifts. Chem Commun (Camb) (2008) 0.92
A europium luminescence assay of lactate and citrate in biological fluids. Org Biomol Chem (2009) 0.91
Plant organelle proteomics: collaborating for optimal cell function. Mass Spectrom Rev (2010) 0.91
A cyclin-dependent protein kinase, CDKC2, colocalizes with and modulates the distribution of spliceosomal components in Arabidopsis. Plant J (2008) 0.91
The controlling effect of temperature in the application of permeation tube devices in standard gas generation. J Chromatogr A (2011) 0.90
Structural and NMR investigations of the ternary adducts of twenty alpha-amino acids and selected dipeptides with a chiral, diaqua-ytterbium complex. Dalton Trans (2003) 0.90
Arabidopsis T-DNA insertional lines for CDC25 are hypersensitive to hydroxyurea but not to zeocin or salt stress. Ann Bot (2010) 0.90