Published in Biochim Biophys Acta on March 19, 2008
Proteomics: challenges, techniques and possibilities to overcome biological sample complexity. Hum Genomics Proteomics (2009) 1.07
Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation. Proteome Sci (2008) 1.02
Systems genomics evaluation of the SH-SY5Y neuroblastoma cell line as a model for Parkinson's disease. BMC Genomics (2014) 0.88
Exploring the human seminal plasma proteome: an unexplored gold mine of biomarker for male infertility and male reproduction disorder. J Reprod Infertil (2015) 0.82
Proteomic analysis of neurons microdissected from formalin-fixed, paraffin-embedded Alzheimer's disease brain tissue. Sci Rep (2015) 0.82
Study of Protein Expression in Peri-Infarct Tissue after Cerebral Ischemia. Sci Rep (2015) 0.80
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans. Proc Natl Acad Sci U S A (2009) 4.09
Morphological and biochemical characterization of a human liver in a uPA-SCID mouse chimera. Hepatology (2005) 3.72
Improved visualization of protein consensus sequences by iceLogo. Nat Methods (2009) 3.64
Large-scale identification of N-terminal peptides in the halophilic archaea Halobacterium salinarum and Natronomonas pharaonis. J Proteome Res (2007) 3.30
Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. Nat Biotechnol (2003) 3.10
Caspase-14 protects against epidermal UVB photodamage and water loss. Nat Cell Biol (2007) 2.82
Targeted peptidecentric proteomics reveals caspase-7 as a substrate of the caspase-1 inflammasomes. Mol Cell Proteomics (2008) 2.64
Listeria monocytogenes impairs SUMOylation for efficient infection. Nature (2010) 2.57
Neuroglobin and cytoglobin. Fresh blood for the vertebrate globin family. EMBO Rep (2002) 2.50
LRRK2 controls an EndoA phosphorylation cycle in synaptic endocytosis. Neuron (2012) 2.49
LNCipedia: a database for annotated human lncRNA transcript sequences and structures. Nucleic Acids Res (2012) 2.40
The miR-17-92 microRNA cluster regulates multiple components of the TGF-β pathway in neuroblastoma. Mol Cell (2010) 2.38
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis. Nat Methods (2005) 2.33
Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster. PLoS Biol (2009) 2.25
Protein N-terminal acetyltransferases: when the start matters. Trends Biochem Sci (2012) 2.19
The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol (2004) 2.12
PIP(2)-PDZ domain binding controls the association of syntenin with the plasma membrane. Mol Cell (2002) 2.04
Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs. Mol Cell Proteomics (2008) 2.01
Global analysis of the mitochondrial N-proteome identifies a processing peptidase critical for protein stability. Cell (2009) 1.96
Caspase-14 is required for filaggrin degradation to natural moisturizing factors in the skin. J Invest Dermatol (2011) 1.93
Reactivity studies of the Fe(III) and Fe(II)NO forms of human neuroglobin reveal a potential role against oxidative stress. J Biol Chem (2004) 1.83
Improved recovery of proteome-informative, protein N-terminal peptides by combined fractional diagonal chromatography (COFRADIC). Proteomics (2008) 1.81
Human brain neuroglobin structure reveals a distinct mode of controlling oxygen affinity. Structure (2003) 1.75
Involvement of sialoadhesin in entry of porcine reproductive and respiratory syndrome virus into porcine alveolar macrophages. J Virol (2003) 1.72
Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. J Inorg Biochem (2005) 1.71
A phylogenomic profile of globins. BMC Evol Biol (2006) 1.64
NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregation. PLoS Genet (2011) 1.57
Proteomics of Arabidopsis seed germination. A comparative study of wild-type and gibberellin-deficient seeds. Plant Physiol (2002) 1.56
Functional differentiation of myoglobin isoforms in hypoxia-tolerant carp indicates tissue-specific protective roles. Am J Physiol Regul Integr Comp Physiol (2011) 1.55
A decade of Raman spectroscopy in art and archaeology. Chem Rev (2007) 1.54
Proteomics of Medicago truncatula seed development establishes the time frame of diverse metabolic processes related to reserve accumulation. Plant Physiol (2003) 1.53
Improving the reliability and throughput of mass spectrometry-based proteomics by spectrum quality filtering. Proteomics (2006) 1.52
T-cell receptor-induced JNK activation requires proteolytic inactivation of CYLD by MALT1. EMBO J (2011) 1.52
Allosteric regulation and temperature dependence of oxygen binding in human neuroglobin and cytoglobin. Molecular mechanisms and physiological significance. J Biol Chem (2004) 1.51
Neuroglobin and cytoglobin overexpression protects human SH-SY5Y neuroblastoma cells against oxidative stress-induced cell death. Neurosci Lett (2006) 1.50
The redox state of the cell regulates the ligand binding affinity of human neuroglobin and cytoglobin. J Biol Chem (2003) 1.47
Structural plasticity of functional actin: pictures of actin binding protein and polymer interfaces. Structure (2003) 1.46
Chromatographic isolation of methionine-containing peptides for gel-free proteome analysis: identification of more than 800 Escherichia coli proteins. Mol Cell Proteomics (2002) 1.42
Reactions of ferrous neuroglobin and cytoglobin with nitrite under anaerobic conditions. J Inorg Biochem (2008) 1.41
A manually curated network of the PML nuclear body interactome reveals an important role for PML-NBs in SUMOylation dynamics. Int J Biol Sci (2010) 1.38
Redox proteomics of protein-bound methionine oxidation. Mol Cell Proteomics (2011) 1.37
ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics. Proteomics (2010) 1.36
Parkin interacts with Ambra1 to induce mitophagy. J Neurosci (2011) 1.36
Listeria comet tails: the actin-based motility machinery at work. Trends Cell Biol (2008) 1.35
Proteome-wide Identification of HtrA2/Omi Substrates. J Proteome Res (2007) 1.34
Functional complexes between YAP2 and ZO-2 are PDZ domain-dependent, and regulate YAP2 nuclear localization and signalling. Biochem J (2010) 1.34
Nitric oxide binding properties of neuroglobin. A characterization by EPR and flash photolysis. J Biol Chem (2002) 1.34
Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events. Mol Cell Proteomics (2013) 1.33
PINK1 loss-of-function mutations affect mitochondrial complex I activity via NdufA10 ubiquinone uncoupling. Science (2014) 1.32
Gelsolin-induced epithelial cell invasion is dependent on Ras-Rac signaling. EMBO J (2002) 1.31
DBToolkit: processing protein databases for peptide-centric proteomics. Bioinformatics (2005) 1.30
SitePredicting the cleavage of proteinase substrates. Trends Biochem Sci (2009) 1.29
Proteome-derived peptide libraries allow detailed analysis of the substrate specificities of N(alpha)-acetyltransferases and point to hNaa10p as the post-translational actin N(alpha)-acetyltransferase. Mol Cell Proteomics (2011) 1.27
Proteome-wide substrate analysis indicates substrate exclusion as a mechanism to generate caspase-7 versus caspase-3 specificity. Mol Cell Proteomics (2009) 1.27
Selecting protein N-terminal peptides by combined fractional diagonal chromatography. Nat Protoc (2011) 1.26
Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. BMC Genomics (2007) 1.26
Complementary positional proteomics for screening substrates of endo- and exoproteases. Nat Methods (2010) 1.25