Published in Appl Environ Microbiol on May 09, 2008
Free-living protozoa in two unchlorinated drinking water supplies, identified by phylogenic analysis of 18S rRNA gene sequences. Appl Environ Microbiol (2009) 0.90
Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater. ISME J (2013) 0.83
Estimating biodiversity of fungi in activated sludge communities using culture-independent methods. Microb Ecol (2011) 0.81
Watershed-scale fungal community characterization along a pH gradient in a subsurface environment cocontaminated with uranium and nitrate. Appl Environ Microbiol (2014) 0.80
Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities. Front Microbiol (2016) 0.75
High Diversity Revealed in Leaf-Associated Protists (Rhizaria: Cercozoa) of Brassicaceae. J Eukaryot Microbiol (2016) 0.75
Phylogenetic diversity and in situ detection of eukaryotes in anaerobic sludge digesters. PLoS One (2017) 0.75
Basic local alignment search tool. J Mol Biol (1990) 659.07
The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol (1987) 266.90
TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci (1994) 14.57
A new version of the RDP (Ribosomal Database Project). Nucleic Acids Res (1999) 13.25
The epidemiology of hematogenous candidiasis caused by different Candida species. Clin Infect Dis (1997) 7.09
Novel kingdom-level eukaryotic diversity in anoxic environments. Proc Natl Acad Sci U S A (2002) 2.88
Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment. Proc Natl Acad Sci U S A (2002) 2.75
In situ biodegradation: microbiological patterns in a contaminated aquifer. Science (1991) 2.61
Application of denaturing gradient gel electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques. Appl Environ Microbiol (2001) 2.36
Detritus-dependent development of the microbial community in an experimental system: qualitative analysis by denaturing gradient gel electrophoresis. Appl Environ Microbiol (1999) 2.18
New spectrum of fungal infections in patients with cancer. Rev Infect Dis (1989) 2.16
Oxygen requirements of yeasts. Appl Environ Microbiol (1990) 2.02
Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer. Appl Environ Microbiol (2001) 1.83
Novel eukaryotic lineages inferred from small-subunit rRNA analyses of oxygen-depleted marine environments. Appl Environ Microbiol (2003) 1.82
Novel eukaryotes from the permanently anoxic Cariaco Basin (Caribbean Sea). Appl Environ Microbiol (2003) 1.63
The extent of protist diversity: insights from molecular ecology of freshwater eukaryotes. Proc Biol Sci (2005) 1.55
Genetic diversity of small eukaryotes in lakes differing by their trophic status. Appl Environ Microbiol (2005) 1.39
Protistan communities in aquifers: a review. FEMS Microbiol Rev (1997) 1.30
Catabolism of benzene compounds by ascomycetous and basidiomycetous yeasts and yeastlike fungi. A literature review and an experimental approach. Antonie Van Leeuwenhoek (1993) 1.08
Protozoa in subsurface sediments from sites contaminated with aviation gasoline or jet fuel. Appl Environ Microbiol (1993) 1.07
Opportunistic infection with Rhodotorula in cancer patients treated by chemotherapy: two case reports. Clin Oncol (R Coll Radiol) (2000) 0.96
Development and application of a most-probable-number-pcr assay to quantify flagellate populations in soil samples. Appl Environ Microbiol (2001) 0.95
Distribution and Composition of Microbial Populations in a Landfill Leachate Contaminated Aquifer (Grindsted, Denmark). Microb Ecol (1999) 0.94
Diversity of the microeukaryotic community in sulfide-rich Zodletone Spring (Oklahoma). Appl Environ Microbiol (2005) 0.94
Distribution and activity of microorganisms in subsurface sediments of a pristine study site in Oklahoma. Microb Ecol (1988) 0.93
The predatory soil flagellate Heteromita globosa stimulates toluene biodegradation by a Pseudomonas sp. FEMS Microbiol Lett (2001) 0.92
Degradation of some phenols and hydroxybenzoates by the imperfect ascomycetous yeasts Candida parapsilosis and Arxula adeninivorans: evidence for an operative gentisate pathway. Antonie Van Leeuwenhoek (1992) 0.92
Characterisation of yeasts isolated from deep igneous rock aquifers of the Fennoscandian Shield. Microb Ecol (2003) 0.88
Fungal infections of the urinary tract. World J Urol (1999) 0.85
The bacterivorous soil flagellate Heteromita globosa reduces bacterial clogging under denitrifying conditions in sand-filled aquifer columns. Appl Environ Microbiol (2002) 0.84
Field evidence for a protistan role in an organically-contaminated aquifer. Environ Sci Technol (2002) 0.84
The soil flagellate Heteromita globosa accelerates bacterial degradation of alkylbenzenes through grazing and acetate excretion in batch culture. Microb Ecol (2005) 0.84
Reactive transport modelling of biogeochemical processes and carbon isotope geochemistry inside a landfill leachate plume. J Contam Hydrol (2004) 0.83
Biogeochemistry and isotope geochemistry of a landfill leachate plume. J Contam Hydrol (2003) 0.80
The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol Lett (2007) 7.43
Marine microorganisms make a meal of oil. Nat Rev Microbiol (2006) 3.15
Microbial community structure and functioning along metal pollution gradients. Environ Toxicol Chem (2013) 1.20
Community assembly, species richness and nestedness of arbuscular mycorrhizal fungi in agricultural soils. Mol Ecol (2012) 1.19
Reference genes for QRT-PCR tested under various stress conditions in Folsomia candida and Orchesella cincta (Insecta, Collembola). BMC Mol Biol (2009) 1.09
Community flux balance analysis for microbial consortia at balanced growth. PLoS One (2013) 1.08
Positive effects of organic farming on below-ground mutualists: large-scale comparison of mycorrhizal fungal communities in agricultural soils. New Phytol (2010) 1.06
Health risks associated with pesticide residues in sediments, fish, and plants from the Ouémé Valley in the Republic of Bénin. Arch Environ Contam Toxicol (2013) 1.01
Differential gene expression profiles associated with heavy metal tolerance in the soil insect Orchesella cincta. Insect Biochem Mol Biol (2006) 1.00
Testing potential effects of maize expressing the Bacillus thuringiensis Cry1Ab endotoxin (Bt maize) on mycorrhizal fungal communities via DNA- and RNA-based pyrosequencing and molecular fingerprinting. Appl Environ Microbiol (2012) 0.97
Stratification and seasonal stability of diverse bacterial communities in a Pinus merkusii (pine) forest soil in central Java, Indonesia. Environ Microbiol (2002) 0.96
Collembase: a repository for springtail genomics and soil quality assessment. BMC Genomics (2007) 0.96
Effects of probiotic Lactobacillus salivarius W24 on the compositional stability of oral microbial communities. Arch Oral Biol (2008) 0.92
A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen. nov., sp. nov. degrades aromatic compounds with Fe(III), Mn(IV) or nitrate as an electron acceptor. FEMS Microbiol Ecol (2009) 0.92
Molecular diversity and distribution of aromatic hydrocarbon-degrading anaerobes across a landfill leachate plume. Environ Microbiol (2011) 0.92
Dominance of Geobacteraceae in BTX-degrading enrichments from an iron-reducing aquifer. FEMS Microbiol Ecol (2007) 0.91
Assessing structural and functional plankton responses to carbendazim toxicity. Environ Toxicol Chem (2004) 0.90
A multivariate statistical approach to spatial representation of groundwater contamination using hydrochemistry and microbial community profiles. Environ Sci Technol (2005) 0.90
Microbial aspects of anaerobic BTEX degradation. Biomed Environ Sci (2002) 0.89
Stability and resilience of oral microcosms toward acidification and Candida outgrowth by arginine supplementation. Microb Ecol (2014) 0.89
Structural and functional variation in soil fungal communities associated with litter bags containing maize leaf. FEMS Microbiol Ecol (2013) 0.89
Transcriptomics reveals extensive inducible biotransformation in the soil-dwelling invertebrate Folsomia candida exposed to phenanthrene. BMC Genomics (2009) 0.89
Metallothionein mRNA expression and cadmium tolerance in metal-stressed and reference populations of the springtail Orchesella cincta. Ecotoxicology (2005) 0.89
Temperature-induced gene expression associated with different thermal reaction norms for growth rate. J Exp Zool B Mol Dev Evol (2008) 0.89
Phylogenetic and physiological diversity of dissimilatory ferric iron reducers in sediments of the polluted Scheldt estuary, Northwest Europe. Environ Microbiol (2007) 0.87
The influence of long-term copper contaminated agricultural soil at different pH levels on microbial communities and springtail transcriptional regulation. Environ Sci Technol (2011) 0.86
How Geobacteraceae may dominate subsurface biodegradation: physiology of Geobacter metallireducens in slow-growth habitat-simulating retentostats. Environ Microbiol (2009) 0.86
Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill. Appl Environ Microbiol (2005) 0.85
Systematic evaluation of bias in microbial community profiles induced by whole genome amplification. Environ Microbiol (2014) 0.85
Towards understanding inter-strain attachment variations of Escherichia coli during transport in saturated quartz sand. Water Res (2009) 0.84
Sensitive life detection strategies for low-biomass environments: optimizing extraction of nucleic acids adsorbing to terrestrial and Mars analogue minerals. FEMS Microbiol Ecol (2012) 0.84
A functional isopenicillin N synthase in an animal genome. Mol Biol Evol (2012) 0.84
Biological significance of metals partitioned to subcellular fractions within earthworms (Aporrectodea caliginosa). Environ Toxicol Chem (2006) 0.83
Reactive transport modelling of biogeochemical processes and carbon isotope geochemistry inside a landfill leachate plume. J Contam Hydrol (2004) 0.83
Spatial heterogeneity in sediment-associated bacterial and eukaryotic communities in a landfill leachate-contaminated aquifer. FEMS Microbiol Ecol (2008) 0.82
Gene expression analysis reveals a gene set discriminatory to different metals in soil. Toxicol Sci (2010) 0.82
Recombinational micro-evolution of functionally different metallothionein promoter alleles from Orchesella cincta. BMC Evol Biol (2007) 0.81
Comparative population analysis of metallothionein promoter alleles suggests stress-induced microevolution in the field. Environ Sci Technol (2008) 0.81
Organochlorine and organophosphorous pesticide residues in the Ouémé River catchment in the Republic of Bénin. Environ Int (2006) 0.81
Stress responses investigated; application of zinc and heat to Terrestrial Model Ecosystems from heavy metal polluted grassland. Sci Total Environ (2008) 0.81
Microbial communities in the world's largest acidic volcanic lake, Kawah Ijen in Indonesia, and in the Banyupahit river originating from it. Microb Ecol (2006) 0.80
Biogeochemistry and isotope geochemistry of a landfill leachate plume. J Contam Hydrol (2003) 0.80
Effects of fungicides and biofungicides on population density and community structure of soil oribatid mites. Sci Total Environ (2013) 0.80
Tracking fungal community responses to maize plants by DNA- and RNA-based pyrosequencing. PLoS One (2013) 0.80
Seasonal dynamics in leachate hydrochemistry and natural attenuation in surface run-off water from a tropical landfill. Waste Manag (2008) 0.79
Hydrogen isotopic enrichment: an indicator of biodegradation at a petroleum hydrocarbon contaminated field site. Environ Sci Technol (2002) 0.79
Do fungivores trigger the transfer of protective metabolites from host plants to arbuscular mycorrhizal hyphae? Ecology (2013) 0.79
Dietary zinc reduces uptake but not metallothionein binding and elimination of cadmium in the springtail, Orchesella cincta. Environ Toxicol Chem (2003) 0.79
High throughput nano-liter RT-qPCR to classify soil contamination using a soil arthropod. BMC Mol Biol (2011) 0.79
Ecological control analysis: being(s) in control of mass flux and metabolite concentrations in anaerobic degradation processes. Environ Microbiol (2007) 0.79
PAH biotransformation in terrestrial invertebrates--a new phase II metabolite in isopods and springtails. Comp Biochem Physiol C Toxicol Pharmacol (2004) 0.78
Copper tolerance and genetic diversity of Porcellionides sexfasciatus (ISOPODA) in a highly contaminated mine habitat. Environ Toxicol Chem (2013) 0.78
Impacts of shallow geothermal energy production on redox processes and microbial communities. Environ Sci Technol (2013) 0.78
Transcriptional responses indicate attenuated oxidative stress in the springtail Folsomia candida exposed to mixtures of cadmium and phenanthrene. Ecotoxicology (2013) 0.78
Male-male competition leads to less abundant but more attractive sperm. Biol Lett (2013) 0.77
Expression of mtc in Folsomia candida indicative of metal pollution in soil. Environ Pollut (2011) 0.77
The effect of soil pH and temperature on Folsomia candida transcriptional regulation. J Insect Physiol (2009) 0.77
Genetic variation in parthenogenetic collembolans is associated with differences in fitness and cadmium-induced transcriptome responses. Environ Sci Technol (2013) 0.77
Transcriptome assembly and microarray construction for Enchytraeus crypticus, a model oligochaete to assess stress response mechanisms derived from soil conditions. BMC Genomics (2014) 0.77
Sorption, dissolution and pH determine the long-term equilibration and toxicity of coated and uncoated ZnO nanoparticles in soil. Environ Pollut (2013) 0.77
Microbial community- and metabolite dynamics of an anoxic dechlorinating bioreactor. Environ Sci Technol (2010) 0.77
Influence of adaptive evolution of cadmium tolerance on neutral and functional genetic variation in Orchesella cincta. Ecotoxicology (2012) 0.77
Acute toxicity of pesticides to the tropical freshwater shrimp Caridina laevis. Ecotoxicol Environ Saf (2007) 0.76
Pesticide residues in sediments and aquatic species in Lake Nokoué and Cotonou Lagoon in the Republic of Bénin. Environ Monit Assess (2013) 0.76
Influence of fishing technique on organochlorine pesticide accumulation in fish and its possible human health risk in the Republic of Bénin. Bull Environ Contam Toxicol (2013) 0.76
Contamination of fish by organochlorine pesticide residues in the Ouémé River catchment in the Republic of Bénin. Environ Int (2006) 0.76
The impact of low-temperature seasonal aquifer thermal energy storage (SATES) systems on chlorinated solvent contaminated groundwater: modeling of spreading and degradation. J Contam Hydrol (2013) 0.76
Metabolism of 1-fluoropyrene and pyrene in marine flatfish and terrestrial isopods. Environ Toxicol Pharmacol (2002) 0.76
Pyrene biotransformation products as biomarkers of polycyclic aromatic hydrocarbon exposure in terrestrial Isopoda: concentration-response relationship, and field study in a contaminated forest. Environ Toxicol Chem (2003) 0.75
Interactions between accumulated copper, bacterial community structure and histamine levels in crayfish meat during storage. J Sci Food Agric (2014) 0.75
Temperature-induced impacts on groundwater quality and arsenic mobility in anoxic aquifer sediments used for both drinking water and shallow geothermal energy production. Water Res (2013) 0.75
Microbial responses to zinc in soil microcosms with and without a natural assemblage of enchytraeids. Environ Toxicol Chem (2005) 0.75
Integrating transcriptomics into triad-based soil-quality assessment. Environ Toxicol Chem (2014) 0.75
Chlorpyrifos causes decreased organic matter decomposition by suppressing earthworm and termite communities in tropical soil. Environ Pollut (2010) 0.75
A solvent-free method for spiking terrestrial algae (Desmococcus spp.) with pyrene for use in bioassays. Chemosphere (2003) 0.75
Changes in soil oribatid communities associated with conversion from conventional to organic agriculture. Exp Appl Acarol (2016) 0.75
Microbial nitrogen transformation potential in surface run-off leachate from a tropical landfill. Waste Manag (2011) 0.75
3D-CSIA: carbon, chlorine, and hydrogen isotope fractionation in transformation of TCE to ethene by a Dehalococcoides culture. Environ Sci Technol (2013) 0.75