Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.).

PubWeight™: 1.02‹?› | Rank: Top 15%

🔗 View Article (PMC 2440766)

Published in BMC Genomics on May 29, 2008

Authors

Hernán Laurentin1, Astrid Ratzinger, Petr Karlovsky

Author Affiliations

1: Universidad Centroccidental Lisandro Alvarado, Biologic Sciences Department, Agronomy Faculty, Barquisimeto, Venezuela. hlaurentin@ucla.edu.ve

Articles citing this

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers. BMC Genomics (2011) 2.53

Genomics and bioinformatics resources for crop improvement. Plant Cell Physiol (2010) 1.33

The influence of fruit load on the tomato pericarp metabolome in a Solanum chmielewskii introgression line population. Plant Physiol (2010) 1.01

Correlation exploration of metabolic and genomic diversity in rice. BMC Genomics (2009) 0.92

Characterization of the natural variation in Arabidopsis thaliana metabolome by the analysis of metabolic distance. Metabolomics (2011) 0.90

The use of natural genetic diversity in the understanding of metabolic organization and regulation. Front Plant Sci (2011) 0.84

Fungal metabolic plasticity and sexual development mediate induced resistance to arthropod fungivory. Proc Biol Sci (2013) 0.83

Citramalic acid and salicylic acid in sugar beet root exudates solubilize soil phosphorus. BMC Plant Biol (2011) 0.83

Interactions among filamentous fungi Aspergillus niger, Fusarium verticillioides and Clonostachys rosea: fungal biomass, diversity of secreted metabolites and fumonisin production. BMC Microbiol (2016) 0.77

Plasma-Based Degradation of Mycotoxins Produced by Fusarium, Aspergillus and Alternaria Species. Toxins (Basel) (2017) 0.75

Genetic diversity and metabolic profile of Salvia officinalis populations: implications for advanced breeding strategies. Planta (2017) 0.75

Articles cited by this

AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res (1995) 45.26

Metabolomics--the link between genotypes and phenotypes. Plant Mol Biol (2002) 11.36

Centering, scaling, and transformations: improving the biological information content of metabolomics data. BMC Genomics (2006) 5.04

Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review. Mol Ecol (2002) 4.98

The genetics of plant metabolism. Nat Genet (2006) 4.28

Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry. Nat Protoc (2007) 3.41

Plant metabolomics: from holistic hope, to hype, to hot topic. New Phytol (2006) 1.72

Applications of metabolomics in agriculture. J Agric Food Chem (2006) 1.20

Molecular distinction amongst varieties of mulberry using RAPD and DAMD profiles. BMC Plant Biol (2001) 1.20

Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP). BMC Genet (2006) 1.17

Insecticidal activity of chemical constituents from Aristolochia pubescens against Anticarsia gemmatalis larvae. Pest Manag Sci (2004) 1.16

Comparative analyses of genetic diversities within tomato and pepper collections detected by retrotransposon-based SSAP, AFLP and SSR. Theor Appl Genet (2005) 1.15

Deciphering metabolic networks. Eur J Biochem (2003) 1.13

Genetic diversity and relationships in mulberry (genus Morus) as revealed by RAPD and ISSR marker assays. BMC Genet (2004) 1.05

A survey of sesamin and composition of tocopherol variability from seeds of eleven diverse sesame (Sesamum indicum L.) genotypes using HPLC-PAD-ECD. Phytochem Anal (2008) 0.99

Mode of action of sesame lignans in protecting low-density lipoprotein against oxidative damage in vitro. Life Sci (2000) 0.97

Comparative analysis of sesame lignans (sesamin and sesamolin) in affecting hepatic fatty acid metabolism in rats. Br J Nutr (2007) 0.96

Dietary defatted sesame flour decreases susceptibility to oxidative stress in hypercholesterolemic rabbits. J Nutr (1999) 0.95

Single primer amplification reaction methods reveal exotic and indigenous mulberry varieties are similarly diverse. J Biosci (2005) 0.93

Assessment of genetic diversity in Trigonella foenum-graecum and Trigonella caerulea using ISSR and RAPD markers. BMC Plant Biol (2004) 0.93

Sesamolin inhibits lipid peroxidation in rat liver and kidney. J Nutr (1998) 0.92

Antioxidative catechol lignans converted from sesamin and sesaminol triglucoside by culturing with Aspergillus. J Agric Food Chem (2005) 0.90

Dietary sesamin is converted to enterolactone in humans. J Nutr (2005) 0.88

A preliminary assessment of genetic relationships among agronomically important cultivars of black pepper. BMC Genet (2007) 0.87

Chromatographic analysis of lignans. J Chromatogr A (2005) 0.85

The influence of genotypic variation on metabolite diversity in populations of two endophytic fungal species. Fungal Genet Biol (2004) 0.82

Metabolic and genomic diversity of rhizobia isolated from field standing native and exotic woody legumes in southern Ethiopia. Syst Appl Microbiol (2004) 0.82

Field assessment of plant derivative compounds for managing fungal soybean diseases. Biochem Soc Trans (2000) 0.78

Toxicity of synthetic piperonyl compounds to leaf-cutting ants and their symbiotic fungus. Pest Manag Sci (2001) 0.77

Articles by these authors

Masked mycotoxins: a review. Mol Nutr Food Res (2012) 1.92

Defence reactions in the apoplastic proteome of oilseed rape (Brassica napus var. napus) attenuate Verticillium longisporum growth but not disease symptoms. BMC Plant Biol (2008) 1.18

Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP). BMC Genet (2006) 1.17

Truffles regulate plant root morphogenesis via the production of auxin and ethylene. Plant Physiol (2009) 1.16

Piriformospora indica affects plant growth by auxin production. Physiol Plant (2007) 1.15

Microbial detoxification of mycotoxin deoxynivalenol. J Basic Microbiol (2004) 1.10

Occurrence of Fusarium species and trichothecenes in Nigerian maize. Int J Food Microbiol (2007) 1.10

Truffle volatiles: from chemical ecology to aroma biosynthesis. New Phytol (2011) 1.08

Upscaled CTAB-based DNA extraction and real-time PCR assays for Fusarium culmorum and F. graminearum DNA in plant material with reduced sampling error. Int J Mol Sci (2008) 1.04

Determination of the LOQ in real-time PCR by receiver operating characteristic curve analysis: application to qPCR assays for Fusarium verticillioides and F. proliferatum. Anal Bioanal Chem (2011) 1.02

Salicylic acid and salicylic acid glucoside in xylem sap of Brassica napus infected with Verticillium longisporum. J Plant Res (2009) 1.00

Arabidopsis mutants of sphingolipid fatty acid α-hydroxylases accumulate ceramides and salicylates. New Phytol (2012) 0.99

Simultaneous detection of Fusarium culmorum and F. graminearum in plant material by duplex PCR with melting curve analysis. BMC Microbiol (2006) 0.98

Nocardioides sp. strain WSN05-2, isolated from a wheat field, degrades deoxynivalenol, producing the novel intermediate 3-epi-deoxynivalenol. Appl Microbiol Biotechnol (2010) 0.97

Adaptation of Fusarium graminearum to tebuconazole yielded descendants diverging for levels of fitness, fungicide resistance, virulence, and mycotoxin production. Phytopathology (2010) 0.95

Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps. Algorithms Mol Biol (2008) 0.94

Ectomycorrhizal colonization and diversity in relation to tree biomass and nutrition in a plantation of transgenic poplars with modified lignin biosynthesis. PLoS One (2013) 0.92

Genetic and environmental control of the Verticillium syndrome in Arabidopsis thaliana. BMC Plant Biol (2010) 0.91

Mechanisms regulating grain contamination with trichothecenes translocated from the stem base of wheat (Triticum aestivum) infected with Fusarium culmorum. Phytopathology (2013) 0.89

Infection of corn ears by Fusarium spp. induces the emission of volatile sesquiterpenes. J Agric Food Chem (2014) 0.87

Conversion of cDNA differential display results (DDRT-PCR) into quantitative transcription profiles. BMC Genomics (2005) 0.87

ERECTA, salicylic acid, abscisic acid, and jasmonic acid modulate quantitative disease resistance of Arabidopsis thaliana to Verticillium longisporum. BMC Plant Biol (2014) 0.87

Role of zearalenone lactonase in protection of Gliocladium roseum from fungitoxic effects of the mycotoxin zearalenone. Appl Environ Microbiol (2006) 0.86

Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum. New Phytol (2014) 0.86

Biodiversity and species identity shape the antifungal activity of bacterial communities. Ecology (2014) 0.86

The tryptophan aminotransferase Tam1 catalyses the single biosynthetic step for tryptophan-dependent pigment synthesis in Ustilago maydis. Mol Microbiol (2008) 0.85

The plant host Brassica napus induces in the pathogen Verticillium longisporum the expression of functional catalase peroxidase which is required for the late phase of disease. Mol Plant Microbe Interact (2012) 0.84

Application of headspace solid phase microextraction to qualitative and quantitative analysis of tobacco additives in cigarettes. J Chromatogr A (2006) 0.83

Fungal metabolic plasticity and sexual development mediate induced resistance to arthropod fungivory. Proc Biol Sci (2013) 0.83

Citramalic acid and salicylic acid in sugar beet root exudates solubilize soil phosphorus. BMC Plant Biol (2011) 0.83

Effect of light intensity on colour morph formation and performance of the grain aphid Sitobion avenae F. (Homoptera: Aphididae). J Insect Physiol (2010) 0.82

Intraspecific genotypic variability determines concentrations of key truffle volatiles. New Phytol (2012) 0.82

Improved coverage of cDNA-AFLP by sequential digestion of immobilized cDNA. BMC Genomics (2008) 0.80

Relationship between water soluble carbohydrate content, aphid endosymbionts and clonal performance of Sitobion avenae on cocksfoot cultivars. PLoS One (2013) 0.77

Identification of ABC transporter genes of Fusarium graminearum with roles in azole tolerance and/or virulence. PLoS One (2013) 0.77

Removal of the endocrine disrupter butyl benzyl phthalate from the environment. Appl Microbiol Biotechnol (2010) 0.77

Components of variance in transcriptomics based on electrophoretic separation of cDNA fragments (cDNA-AFLP). Electrophoresis (2009) 0.76

Quantification of green fluorescent protein fluorescence using real-time PCR thermal cycler. Biotechniques (2006) 0.76

Study of fungal colonization of wheat kernels in syria with a focus on fusarium species. Int J Mol Sci (2013) 0.75