Published in Dev Dyn on December 01, 2008
The amphioxus genome and the evolution of the chordate karyotype. Nature (2008) 8.03
The oyster genome reveals stress adaptation and complexity of shell formation. Nature (2012) 5.30
Phylogenomics of eukaryotes: impact of missing data on large alignments. Mol Biol Evol (2004) 3.65
The amphioxus genome illuminates vertebrate origins and cephalochordate biology. Genome Res (2008) 3.04
The origins of multicellularity: a multi-taxon genome initiative. Trends Genet (2007) 1.90
The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens. EMBO Rep (2010) 1.62
Were vertebrates octoploid? Philos Trans R Soc Lond B Biol Sci (2002) 1.62
Eleven daughters of NANOG. Genomics (2004) 1.56
Buddenbrockia is a cnidarian worm. Science (2007) 1.48
Ciona intestinalis ParaHox genes: evolution of Hox/ParaHox cluster integrity, developmental mode, and temporal colinearity. Mol Phylogenet Evol (2002) 1.31
HomeoDB: a database of homeobox gene diversity. Evol Dev (2008) 1.26
Patterns of conservation and change in honey bee developmental genes. Genome Res (2006) 1.26
Breakup of a homeobox cluster after genome duplication in teleosts. Proc Natl Acad Sci U S A (2006) 1.19
Dispersal of NK homeobox gene clusters in amphioxus and humans. Proc Natl Acad Sci U S A (2003) 1.18
Annotation, nomenclature and evolution of four novel homeobox genes expressed in the human germ line. Gene (2006) 1.18
Correlating Bayesian date estimates with climatic events and domestication using a bovine case study. Biol Lett (2008) 1.14
The dynamics of vertebrate homeobox gene evolution: gain and loss of genes in mouse and human lineages. BMC Evol Biol (2011) 1.13
An unusual choanoflagellate protein released by Hedgehog autocatalytic processing. Proc Biol Sci (2006) 1.07
Comprehensive survey and classification of homeobox genes in the genome of amphioxus, Branchiostoma floridae. Dev Genes Evol (2008) 1.05
HomeoDB2: functional expansion of a comparative homeobox gene database for evolutionary developmental biology. Evol Dev (2012) 1.05
Bayesian phylogenetic analysis supports monophyly of ambulacraria and of cyclostomes. Zoolog Sci (2002) 1.04
A Gbx homeobox gene in amphioxus: insights into ancestry of the ANTP class and evolution of the midbrain/hindbrain boundary. Dev Biol (2006) 1.02
The urbilaterian Super-Hox cluster. Trends Genet (2008) 0.99
No more than 14: the end of the amphioxus Hox cluster. Int J Biol Sci (2005) 0.99
An antecedent of the MHC-linked genomic region in amphioxus. Immunogenetics (2004) 0.95
Parallel retention of Pdx2 genes in cartilaginous fish and coelacanths. Mol Biol Evol (2010) 0.93
Do cnidarians have a ParaHox cluster? Analysis of synteny around a Nematostella homeobox gene cluster. Evol Dev (2008) 0.93
Extensive chordate and annelid macrosynteny reveals ancestral homeobox gene organization. Mol Biol Evol (2011) 0.90
Amphioxus and ascidian Dmbx homeobox genes give clues to the vertebrate origins of midbrain development. Development (2004) 0.89
A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates. Proc Biol Sci (2013) 0.88
A genome-wide view of transcription factor gene diversity in chordate evolution: less gene loss in amphioxus? Brief Funct Genomics (2012) 0.86
The origin and evolution of ARGFX homeobox loci in mammalian radiation. BMC Evol Biol (2010) 0.85
Evolution of the Alx homeobox gene family: parallel retention and independent loss of the vertebrate Alx3 gene. Evol Dev (2011) 0.85
How are comparative genomics and the study of microRNAs changing our views on arthropod endocrinology and adaptations to the environment? Gen Comp Endocrinol (2013) 0.84
A degenerate ParaHox gene cluster in a degenerate vertebrate. Mol Biol Evol (2007) 0.83
The evolution of multicellularity and early animal genomes. Curr Opin Genet Dev (2003) 0.83
Protein evolution of ANTP and PRD homeobox genes. BMC Evol Biol (2008) 0.82
Orphan worm finds a home: Buddenbrockia is a myxozoan. Mol Biol Evol (2002) 0.81
Origin and evolution of a myxozoan worm. Integr Comp Biol (2007) 0.80
Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nat Genet (2016) 0.78
An orphan PRD class homeobox gene expressed in mouse brain and limb development. Dev Genes Evol (2002) 0.78
Degenerate evolution of the hedgehog gene in a hemichordate lineage. Proc Natl Acad Sci U S A (2009) 0.77
Developmental biology of pterobranch hemichordates: history and perspectives. Genesis (2008) 0.77
Discovery and classification of homeobox genes in animal genomes. Methods Mol Biol (2014) 0.76
Genomic organisation of the seven ParaHox genes of coelacanths. J Exp Zool B Mol Dev Evol (2013) 0.75
Ancient homeobox gene loss and the evolution of chordate brain and pharynx development: deductions from amphioxus gene expression. Proc Biol Sci (2010) 0.75