Published in J Phys Chem B on July 02, 2008
Probing the dynamics of the P1 helix within the Tetrahymena group I intron. J Am Chem Soc (2009) 0.94
Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR. J Biomol NMR (2009) 0.83
Conformational equilibria of bulged sites in duplex DNA studied by EPR spectroscopy. J Phys Chem B (2009) 0.83
Direct simulation of magnetic resonance relaxation rates and line shapes from molecular trajectories. J Phys Chem B (2012) 0.75
Quantitative tumor oxymetric images from 4D electron paramagnetic resonance imaging (EPRI): methodology and comparison with blood oxygen level-dependent (BOLD) MRI. Magn Reson Med (2003) 3.02
Transition state stabilization by a catalytic RNA. Science (2002) 2.73
A Versatile High Speed 250 MHz Pulse Imager for Biomedical Applications. Concepts Magn Reson Part B Magn Reson Eng (2008) 2.03
Spectral fitting: the extraction of crucial information from a spectrum and a spectral image. Magn Reson Med (2003) 1.68
Identification of RNA-protein interaction networks using PAR-CLIP. Wiley Interdiscip Rev RNA (2011) 1.61
Explanation of spin-lattice relaxation rates of spin labels obtained with multifrequency saturation recovery EPR. J Phys Chem A (2005) 1.61
Comparison of 250 MHz electron spin echo and continuous wave oxygen EPR imaging methods for in vivo applications. Med Phys (2011) 1.54
Isolation and characterization of a thermostable RNA ligase 1 from a Thermus scotoductus bacteriophage TS2126 with good single-stranded DNA ligation properties. Nucleic Acids Res (2005) 1.32
Absolute oxygen R1e imaging in vivo with pulse electron paramagnetic resonance. Magn Reson Med (2013) 1.29
Esters of 5-carboxyl-5-methyl-1-pyrroline N-oxide: a family of spin traps for superoxide. J Org Chem (2003) 1.20
Room-temperature electron spin dynamics in free-standing ZnO quantum dots. Phys Rev Lett (2007) 1.19
Multicolor microRNA FISH effectively differentiates tumor types. J Clin Invest (2013) 1.16
Relative orientation of rigid nitroxides by PELDOR: beyond distance measurements in nucleic acids. Angew Chem Int Ed Engl (2009) 1.15
A contribution to the theory of preferential interaction coefficients. Biophys J (2005) 1.12
A nucleoside that contains a rigid nitroxide spin label: a fluorophore in disguise. Angew Chem Int Ed Engl (2007) 1.08
Simulation of nitroxide electron paramagnetic resonance spectra from brownian trajectories and molecular dynamics simulations. Biophys J (2008) 1.07
A ruler for determining the position of proteins in membranes. J Am Chem Soc (2005) 1.06
Measuring order in contact-poled organic electrooptic materials with variable-angle polarization-referenced absorption spectroscopy (VAPRAS). J Phys Chem B (2010) 1.05
Studying RNA using site-directed spin-labeling and continuous-wave electron paramagnetic resonance spectroscopy. Methods Enzymol (2009) 1.03
Formulation of Zeeman modulation as a signal filter. J Magn Reson (2004) 1.02
Folding of the cocaine aptamer studied by EPR and fluorescence spectroscopies using the bifunctional spectroscopic probe Ç. Nucleic Acids Res (2009) 1.01
Very-low-frequency electron paramagnetic resonance (EPR) imaging of nitroxide-loaded cells. Magn Reson Med (2007) 0.99
Comparing continuous wave progressive saturation EPR and time domain saturation recovery EPR over the entire motional range of nitroxide spin labels. J Magn Reson (2004) 0.98
Trityl radicals: spin labels for nanometer-distance measurements. Chemistry (2012) 0.98
Rigid spin-labeled nucleoside C: a nonperturbing EPR probe of nucleic acid conformation. Nucleic Acids Res (2008) 0.97
Structural investigation of a high-affinity MnII binding site in the hammerhead ribozyme by EPR spectroscopy and DFT calculations. Effects of neomycin B on metal-ion binding. Chembiochem (2003) 0.97
Electron paramagnetic resonance dynamic signatures of TAR RNA-small molecule complexes provide insight into RNA structure and recognition. Biochemistry (2002) 0.96
Phosphate backbone neutralization increases duplex DNA flexibility: a model for protein binding. Proc Natl Acad Sci U S A (2002) 0.95
Monitoring tat peptide binding to TAR RNA by solid-state 31P-19F REDOR NMR. Nucleic Acids Res (2005) 0.94
Investigation of RNA-protein and RNA-metal ion interactions by electron paramagnetic resonance spectroscopy. The HIV TAR-Tat motif. Chem Biol (2002) 0.94
Site-specific incorporation of nitroxide spin-labels into 2'-positions of nucleic acids. Nat Protoc (2007) 0.94
Determination of DNA minor groove width in distamycin-DNA complexes by solid-state NMR. Nucleic Acids Res (2003) 0.93
EPR spectroscopic analysis of U7 hammerhead ribozyme dynamics during metal ion induced folding. Biochemistry (2005) 0.92
A passive dual-circulator based transmit/receive switch for use with reflection resonators in pulse EPR. Concepts Magn Reson Part B Magn Reson Eng (2009) 0.92
Orientation selection in distance measurements between nitroxide spin labels at 94 GHz EPR with variable dual frequency irradiation. Phys Chem Chem Phys (2013) 0.90
Conformational flexibility of DNA. J Am Chem Soc (2011) 0.89
Single base interrogation by a fluorescent nucleotide: each of the four DNA bases identified by fluorescence spectroscopy. Chem Commun (Camb) (2008) 0.89
Zinc-dependent cleavage in the catalytic core of the hammerhead ribozyme: evidence for a pH-dependent conformational change. Nucleic Acids Res (2003) 0.89
Noncovalent and site-directed spin labeling of nucleic acids. Angew Chem Int Ed Engl (2010) 0.89
Unusual mode of binding of human group IIA secreted phospholipase A2 to anionic interfaces as studied by continuous wave and time domain electron paramagnetic resonance spectroscopy. J Biol Chem (2002) 0.88
Solution structure of a nitrous acid induced DNA interstrand cross-link. Nucleic Acids Res (2004) 0.88
W-band PELDOR with 1 kW microwave power: molecular geometry, flexibility and exchange coupling. J Magn Reson (2012) 0.88
Systematic study of the structure-property relationship of a series of ferrocenyl nonlinear optical chromophores. J Am Chem Soc (2005) 0.87
Monte Carlo simulations of locally melted supercoiled DNAs in 20 mM ionic strength. Biophys J (2004) 0.87
A nonafluoro nucleoside as a sensitive 19f NMR probe of nucleic acid conformation. Org Lett (2008) 0.85
Site-directed spin-labeling of nucleic acids by click chemistry: detection of abasic sites in duplex DNA by EPR spectroscopy. J Am Chem Soc (2010) 0.85
Identification of amino acids that promote specific and rigid TAR RNA-tat protein complex formation. Chem Biol (2005) 0.84
EPR spectroscopic analysis of TAR RNA-metal ion interactions. Biochem Biophys Res Commun (2003) 0.84
Conformational equilibria of bulged sites in duplex DNA studied by EPR spectroscopy. J Phys Chem B (2009) 0.83
Measurements of short distances between trityl spin labels with CW EPR, DQC and PELDOR. Phys Chem Chem Phys (2013) 0.83
Using solid-state 31P{19F} REDOR NMR to measure distances between a trifluoromethyl group and a phosphodiester in nucleic acids. J Magn Reson (2005) 0.81
Investigation of Mg2+- and temperature-dependent folding of the hairpin ribozyme by photo-crosslinking: effects of photo-crosslinker tether length and chemistry. Nucleic Acids Res (2005) 0.81
Influence of conformation on the EPR spectrum of 5,5-dimethyl-1-hydroperoxy-1-pyrrolidinyloxyl: a spin trapped adduct of superoxide. J Org Chem (2004) 0.81
Analytical method to determine the orientation of rigid spin labels in DNA. Phys Rev E Stat Nonlin Soft Matter Phys (2010) 0.81
Theory-guided design and synthesis of multichromophore dendrimers: an analysis of the electro-optic effect. J Am Chem Soc (2007) 0.81
Identification of single-base mismatches in duplex DNA by EPR spectroscopy. J Am Chem Soc (2009) 0.81
Nano-engineering lattice dimensionality for a soft matter organic functional material. Adv Mater (2012) 0.81
Antiparallel-aligned neutral-ground-state and zwitterionic chromophores as a nonlinear optical material. J Am Chem Soc (2006) 0.80
Synthesis and characterization of RNA containing a rigid and nonperturbing cytidine-derived spin label. J Org Chem (2012) 0.80
Sequence context effect on the structure of nitrous acid induced DNA interstrand cross-links. Nucleic Acids Res (2004) 0.80
Distance measurements between manganese(II) and nitroxide spin-labels by DEER determine a binding site of Mn(2+) in the HP92 loop of ribosomal RNA. Phys Chem Chem Phys (2015) 0.80
Dielectric dependence of the first molecular hyperpolarizability for electro-optic chromophores. J Phys Chem B (2011) 0.80
A single-stranded junction modulates nanosecond motional ordering of the substrate recognition duplex of a group I ribozyme. Chembiochem (2013) 0.80
Microscopic rate-constants for substrate binding and acylation in cold-adaptation of trypsin I from Atlantic cod. FEBS Lett (2006) 0.79
Interactions of the antibiotics neomycin B and chlortetracycline with the hammerhead ribozyme as studied by Zn2+-dependent RNA cleavage. Bioorg Med Chem (2004) 0.78
Structural changes of an abasic site in duplex DNA affect noncovalent binding of the spin label ç. Nucleic Acids Res (2011) 0.78
Multiple-stepped Zeeman field offset method applied in acquiring enhanced resolution spin-echo electron paramagnetic resonance images. Med Phys (2010) 0.78
Conformationally restricted isoindoline-derived spin labels in duplex DNA: distances and rotational flexibility by pulsed electron-electron double resonance spectroscopy. Chemistry (2014) 0.78
Ab initio diradical/zwitterionic polarizabilities and hyperpolarizabilities in twisted double bonds. J Phys Chem A (2006) 0.78
Solvents level dipole moments. J Phys Chem B (2011) 0.78
Multiplexed miRNA fluorescence in situ hybridization for formalin-fixed paraffin-embedded tissues. Methods Mol Biol (2014) 0.78
Rational enhancement of second-order nonlinearity: bis-(4-methoxyphenyl)hetero-aryl-amino donor-based chromophores: design, synthesis, and electrooptic activity. J Am Chem Soc (2008) 0.78
Simulating electron spin resonance spectra of macromolecules labeled with two dipolar-coupled nitroxide spin labels from trajectories. Phys Chem Chem Phys (2011) 0.78
Optimizing calculations of electronic excitations and relative hyperpolarizabilities of electrooptic chromophores. Acc Chem Res (2014) 0.77
Structure-function relationships of phenoxazine nucleosides for identification of mismatches in duplex DNA by fluorescence spectroscopy. Chembiochem (2011) 0.77
Large flanking sequence effects in single nucleotide mismatch detection using fluorescent nucleoside C(f). Bioorg Med Chem (2010) 0.77
tert-Butyldimethylsilyl O-protected chitosan and chitooligosaccharides: useful precursors for N-modifications in common organic solvents. Carbohydr Res (2008) 0.77
Protein-induced changes in DNA structure and dynamics observed with noncovalent site-directed spin labeling and PELDOR. Nucleic Acids Res (2012) 0.77
Experimental and theoretical study of the metastable decay of negatively charged nucleosides in the gas phase. Phys Chem Chem Phys (2011) 0.77
Linear and nonlinear optical properties of a macrocyclic trichromophore bundle with parallel-aligned dipole moments. J Phys Chem B (2006) 0.76
Syntheses and photophysical properties of 5'-6-locked fluorescent nucleosides. Org Biomol Chem (2013) 0.76
Stereospecific syntheses of 3'-deuterated pyrimidine nucleosides and their site-specific incorporation into DNA. Org Lett (2003) 0.76
Dielectric constants of simple liquids: stockmayer and ellipsoidal fluids. J Phys Chem B (2010) 0.76
Hydrogen-bonding controlled rigidity of an isoindoline-derived nitroxide spin label for nucleic acids. Chem Commun (Camb) (2012) 0.76
Site-directed spin labeling of 2'-amino groups in RNA with isoindoline nitroxides that are resistant to reduction. Chem Commun (Camb) (2015) 0.76
Nitroxide-labeled pyrimidines for non-covalent spin-labeling of abasic sites in DNA and RNA duplexes. Org Biomol Chem (2014) 0.76
Frequency bandwidth extension by use of multiple Zeeman field offsets for electron spin-echo EPR oxygen imaging of large objects. Med Phys (2011) 0.75