Published in Comp Funct Genomics on January 01, 2004
Evolution of diverse cell division and vesicle formation systems in Archaea. Nat Rev Microbiol (2010) 1.55
Genome sequence and characterization of the Tsukamurella bacteriophage TPA2. Appl Environ Microbiol (2010) 1.35
Mycobacteriophage endolysins: diverse and modular enzymes with multiple catalytic activities. PLoS One (2012) 0.99
S-layer, surface-accessible, and concanavalin A binding proteins of Methanosarcina acetivorans and Methanosarcina mazei. J Proteome Res (2009) 0.94
CPDadh: a new peptidase family homologous to the cysteine protease domain in bacterial MARTX toxins. Protein Sci (2009) 0.84
A deficiency in arabinogalactan biosynthesis affects Corynebacterium glutamicum mycolate outer membrane stability. J Bacteriol (2010) 0.82
A framework for classification of prokaryotic protein kinases. PLoS One (2010) 0.81
Analysis and modeling of mycolyl-transferases in the CMN group. Bioinformation (2006) 0.78
Systematic analysis of compositional order of proteins reveals new characteristics of biological functions and a universal correlate of macroevolution. PLoS Comput Biol (2013) 0.77
Identification of the gene for disaggregatase from Methanosarcina mazei. Archaea (2008) 0.76
Features of two new proteins with OmpA-like domains identified in the genome sequences of Leptospira interrogans. PLoS One (2015) 0.76
The Rv3799-Rv3807 gene cluster in Mycobacterium tuberculosis genome corresponds to the 'Ancient Conserved Region' in CMN mycolyltransferases. Evol Bioinform Online (2007) 0.75
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
Basic local alignment search tool. J Mol Biol (1990) 659.07
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res (1994) 392.47
The Pfam protein families database. Nucleic Acids Res (2002) 51.34
Recent improvements to the SMART domain-based sequence annotation resource. Nucleic Acids Res (2002) 25.06
The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res (2003) 24.72
The PROSITE database, its status in 2002. Nucleic Acids Res (2002) 14.71
Surface proteins of gram-positive bacteria and mechanisms of their targeting to the cell wall envelope. Microbiol Mol Biol Rev (1999) 7.76
PHD--an automatic mail server for protein secondary structure prediction. Comput Appl Biosci (1994) 6.71
The genome of M. acetivorans reveals extensive metabolic and physiological diversity. Genome Res (2002) 4.58
Protein repeats: structures, functions, and evolution. J Struct Biol (2001) 3.67
Surface layers of bacteria. Microbiol Rev (1991) 2.78
Bacterial SLH domain proteins are non-covalently anchored to the cell surface via a conserved mechanism involving wall polysaccharide pyruvylation. EMBO J (2000) 2.66
Homology-based method for identification of protein repeats using statistical significance estimates. J Mol Biol (2000) 2.42
Domain structure of the Acetogenium kivui surface layer revealed by electron crystallography and sequence analysis. J Bacteriol (1994) 2.40
Rapid automatic detection and alignment of repeats in protein sequences. Proteins (2000) 2.35
Archaeal surface layer proteins contain beta propeller, PKD, and beta helix domains and are related to metazoan cell surface proteins. Structure (2002) 2.00
The structure of a PKD domain from polycystin-1: implications for polycystic kidney disease. EMBO J (1999) 1.75
Sortase, a universal target for therapeutic agents against gram-positive bacteria? Proc Natl Acad Sci U S A (2000) 1.74
Cloning and nucleotide sequence of the csp1 gene encoding PS1, one of the two major secreted proteins of Corynebacterium glutamicum: the deduced N-terminal region of PS1 is similar to the Mycobacterium antigen 85 complex. Mol Microbiol (1992) 1.15
Characterization of the in vivo acceptors of the mycoloyl residues transferred by the corynebacterial PS1 and the related mycobacterial antigens 85. Mol Microbiol (2000) 1.11
A circular permutation event in the evolution of the SLH domain? Mol Microbiol (1996) 1.02
Sequence analysis corresponding to the PPE and PE proteins in Mycobacterium tuberculosis and other genomes. J Biosci (2003) 1.01
Organization of the outer layers of the cell envelope of Corynebacterium glutamicum: a combined freeze-etch electron microscopy and biochemical study. Biol Cell (1995) 0.94
A Tcl-based SRS v. 4 interface. Comput Appl Biosci (1996) 0.80
Crystal structure of the pleckstrin homology domain from dynamin. Nat Struct Biol (1994) 1.37
Exploration of subsite binding specificity of human cathepsin D through kinetics and rule-based molecular modeling. Protein Sci (1993) 1.11
Antioxidant, anticlastogenic and radioprotective effect of Coleus aromaticus on Chinese hamster fibroblast cells (V79) exposed to gamma radiation. Mutagenesis (2006) 1.04
Cleavage efficiency of the novel aspartic protease yapsin 1 (Yap3p) enhanced for substrates with arginine residues flanking the P1 site: correlation with electronegative active-site pockets predicted by molecular modeling. Biochemistry (1998) 0.89
Snail and spider toxins share a similar tertiary structure and 'cystine motif'. Nat Struct Biol (1994) 0.89
LC-ESI-MS/MS determination of in vivo metabolites of almotriptan in rat plasma, urine and feces: application to pharmacokinetics. J Chromatogr B Analyt Technol Biomed Life Sci (2012) 0.83
Exploring the binding preferences/specificity in the active site of human cathepsin E. Proteins (1995) 0.81
Structure and possible function of aspartic proteinases in barley and other plants. Adv Exp Med Biol (1995) 0.79
Prediction of gamma-turns from amino acid sequences. J Pept Res (2003) 0.77
Protein engineering aspartic proteinases. Site-directed mutagenesis, biochemical characterisation, and X-ray analysis of chymosins with substituted single amino acid substitutions and loop replacements. Adv Exp Med Biol (1998) 0.77
Enhanced antifungal and insect α-amylase inhibitory activities of Alpha-TvD1, a peptide variant of Tephrosia villosa defensin (TvD1) generated through in vitro mutagenesis. Peptides (2012) 0.76
Combinations of turns in proteins. J Pept Res (2003) 0.75
The aspartic proteinases. An historical overview. Adv Exp Med Biol (1998) 0.75
Identification and analysis of novel amino-acid sequence repeats in Bacillus anthracis str. Ames proteome using computational tools. Comp Funct Genomics (2007) 0.75
An aspartic proteinase from flowers of Centaurea calcitrapa. Purification, characterization, molecular cloning, and modelling of its three-dimensional structure. Adv Exp Med Biol (1998) 0.75
Isolation, purification, and characterization of a stable defensin-like antifungal peptide from Trigonella foenum-graecum (fenugreek) seeds. Biochemistry (Mosc) (2015) 0.75
Evaluation of polysaccharide-based chiral stationary phases in quality control of (S)-mirtazapine. Biomed Chromatogr (2011) 0.75
Substrate specificity and molecular modelling of aspartic proteinases (cyprosins) from flowers of Cynara cardunculus subsp. flavescens cv. cardoon. Adv Exp Med Biol (1998) 0.75
Influence of clamping-induced ischemia and reperfusion on the response of a mouse melanoma to radiation and hyperthermia. Int J Hyperthermia (2001) 0.75
Comparisons of the three-dimensional structures, specificities and glycosylation of renins, yeast proteinase A and cathepsin D. Adv Exp Med Biol (1995) 0.75