Published in Mol Biol Evol on July 17, 2008
Evolutionary microbial genomics: insights into bacterial host adaptation. Nat Rev Genet (2010) 2.02
How microbial community composition regulates coral disease development. PLoS Biol (2010) 1.44
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems. PLoS Genet (2012) 1.43
Brucella microti: the genome sequence of an emerging pathogen. BMC Genomics (2009) 1.31
Sense and sensibility: flagellum-mediated gene regulation. Trends Microbiol (2009) 1.28
Continuing evolution of Burkholderia mallei through genome reduction and large-scale rearrangements. Genome Biol Evol (2010) 1.24
A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella. PLoS Genet (2013) 1.05
New clues about the evolutionary history of metabolic losses in bacterial endosymbionts, provided by the genome of Buchnera aphidicola from the aphid Cinara tujafilina. Appl Environ Microbiol (2011) 1.02
Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont. ISME J (2013) 0.95
A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations. PLoS One (2011) 0.91
Archaeal flagellin combines a bacterial type IV pilin domain with an Ig-like domain. Proc Natl Acad Sci U S A (2016) 0.82
Metatranscriptomics reveal differences in in situ energy and nitrogen metabolism among hydrothermal vent snail symbionts. ISME J (2013) 0.81
Genome-wide functional divergence after the symbiosis of proteobacteria with insects unraveled through a novel computational approach. PLoS Comput Biol (2009) 0.79
Pea Broth Enhances the Biocontrol Efficacy of Lysobacter capsici AZ78 by Triggering Cell Motility Associated with Biogenesis of Type IV Pilus. Front Microbiol (2016) 0.79
Abiotic and biotic stressors causing equivalent mortality induce highly variable transcriptional responses in the soybean aphid. G3 (Bethesda) (2014) 0.78
Chance and necessity in the genome evolution of endosymbiotic bacteria of insects. ISME J (2017) 0.75
Genome Evolution in the Obligate but Environmentally Active Luminous Symbionts of Flashlight Fish. Genome Biol Evol (2016) 0.75
Transcriptome Analysis of the Intracellular Facultative Pathogen Piscirickettsia salmonis: Expression of Putative Groups of Genes Associated with Virulence and Iron Metabolism. PLoS One (2016) 0.75
Intraspecific genetic variation in hosts affects regulation of obligate heritable symbionts. Proc Natl Acad Sci U S A (2016) 0.75
Toward a better understanding of the mechanisms of symbiosis: a comprehensive proteome map of a nascent insect symbiont. PeerJ (2017) 0.75
Pivotal Advance: Avian colony-stimulating factor 1 (CSF-1), interleukin-34 (IL-34), and CSF-1 receptor genes and gene products. J Leukoc Biol (2010) 2.45
Evidence from comparative genomics for a complete sexual cycle in the 'asexual' pathogenic yeast Candida glabrata. Genome Biol (2003) 1.52
Bioinformatic discovery and initial characterisation of nine novel antimicrobial peptide genes in the chicken. Immunogenetics (2004) 1.32
Why should we care about molecular coevolution? Evol Bioinform Online (2008) 1.19
Evidence of positively selected sites in mammalian alpha-defensins. Mol Biol Evol (2004) 1.14
Functional coevolutionary networks of the Hsp70-Hop-Hsp90 system revealed through computational analyses. Mol Biol Evol (2007) 1.05
Relationships of gag-pol diversity between Ty3/Gypsy and Retroviridae LTR retroelements and the three kings hypothesis. BMC Evol Biol (2008) 1.04
The effect of chaperonin buffering on protein evolution. Genome Biol Evol (2010) 1.00
A study of the coevolutionary patterns operating within the env gene of the HIV-1 group M subtypes. Mol Biol Evol (2007) 0.97
Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications. Mol Biol Evol (2012) 0.94
The tale of a modern animal plague: tracing the evolutionary history and determining the time-scale for foot and mouth disease virus. Virology (2008) 0.93
Chaperonin 60: a paradoxical, evolutionarily conserved protein family with multiple moonlighting functions. Biol Rev Camb Philos Soc (2013) 0.89
ChloroMitoSSRDB: open source repository of perfect and imperfect repeats in organelle genomes for evolutionary genomics. DNA Res (2013) 0.89
Comparative genomic analysis of a mammalian beta-defensin gene cluster. Physiol Genomics (2007) 0.86
Shifts in the selection-drift balance drive the evolution and epidemiology of foot-and-mouth disease virus. J Virol (2008) 0.86
Testing the neutral fixation of hetero-oligomerism in the archaeal chaperonin CCT. Mol Biol Evol (2007) 0.86
Artifactual phylogenies caused by correlated distribution of substitution rates among sites and lineages: the good, the bad, and the ugly. Syst Biol (2007) 0.85
Evolutionary rate and duplicability in the Arabidopsis thaliana protein-protein interaction network. Genome Biol Evol (2012) 0.85
Two chaperonin systems in bacterial genomes with distinct ecological roles. Trends Genet (2009) 0.85
Evolution of flower shape in Plantago lanceolata. Plant Mol Biol (2009) 0.84
Describing the structural robustness landscape of bacterial small RNAs. BMC Evol Biol (2012) 0.83
No rosetta stone for a sense-antisense origin of aminoacyl tRNA synthetase classes. Mol Biol Evol (2008) 0.81
Adaptive covariation between the coat and movement proteins of prunus necrotic ringspot virus. J Virol (2006) 0.81
In silico identification of functional divergence between the multiple groEL gene paralogs in Chlamydiae. BMC Evol Biol (2007) 0.80
Structural calibration of the rates of amino acid evolution in a search for Darwin in drifting biological systems. Mol Biol Evol (2010) 0.80
Unravelling selection shifts among foot-and-mouth disease virus (FMDV) serotypes. Evol Bioinform Online (2007) 0.80
Mutational dynamics of murine angiogenin duplicates. BMC Evol Biol (2010) 0.79
Genome-wide functional divergence after the symbiosis of proteobacteria with insects unraveled through a novel computational approach. PLoS Comput Biol (2009) 0.79
Reducing the false positive rate in the non-parametric analysis of molecular coevolution. BMC Evol Biol (2008) 0.79
Molecular evolution of rbcL in three gymnosperm families: identifying adaptive and coevolutionary patterns. Biol Direct (2011) 0.79
Coevolution analyses illuminate the dependencies between amino acid sites in the chaperonin system GroES-L. BMC Evol Biol (2013) 0.78
Proteome-wide analysis of functional divergence in bacteria: exploring a host of ecological adaptations. PLoS One (2012) 0.78
Identifying coevolutionary patterns in human leukocyte antigen (HLA) molecules. Evolution (2009) 0.77
Selection for translational robustness in Buchnera aphidicola, endosymbiotic bacteria of aphids. Mol Biol Evol (2009) 0.77
GRAST: a new way of genome reduction analysis using comparative genomics. Bioinformatics (2006) 0.77
Functional diversification of the twin-arginine translocation pathway mediates the emergence of novel ecological adaptations. Mol Biol Evol (2011) 0.77
The evolution of protein moonlighting: adaptive traps and promiscuity in the chaperonins. Biochem Soc Trans (2014) 0.77
Molecular evolutionary mechanisms driving functional diversification of the HSP90A family of heat shock proteins in eukaryotes. Mol Biol Evol (2013) 0.76
Molecular evolution of viral multifunctional proteins: the case of potyvirus HC-Pro. J Mol Evol (2013) 0.75
Correction: Positively selected amino acid replacements within the RuBisCO enzyme of oak trees are associated with ecological adaptations. PLoS One (2017) 0.75