PubRank

Raghothama Chaerkady

Author PubWeight™ 74.98‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Human Protein Reference Database--2009 update. Nucleic Acids Res 2008 21.25
2 Human Proteinpedia enables sharing of human protein data. Nat Biotechnol 2008 4.21
3 Human Proteinpedia: a unified discovery resource for proteomics research. Nucleic Acids Res 2008 2.30
4 Global impact of oncogenic Src on a phosphotyrosine proteome. J Proteome Res 2008 1.94
5 Plasma Proteome Database as a resource for proteomics research. Proteomics 2005 1.76
6 Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry. Mol Cell Proteomics 2011 1.58
7 Mutant proteins as cancer-specific biomarkers. Proc Natl Acad Sci U S A 2011 1.56
8 Comparisons of tyrosine phosphorylated proteins in cells expressing lung cancer-specific alleles of EGFR and KRAS. Proc Natl Acad Sci U S A 2008 1.51
9 Proteogenomics. Proteomics 2011 1.48
10 A comprehensive map of the human urinary proteome. J Proteome Res 2011 1.34
11 Identification of miR-21 targets in breast cancer cells using a quantitative proteomic approach. Proteomics 2009 1.28
12 Antitumor activity and molecular effects of the novel heat shock protein 90 inhibitor, IPI-504, in pancreatic cancer. Mol Cancer Ther 2008 1.18
13 Transcriptomic and proteomic profiling of KEAP1 disrupted and sulforaphane-treated human breast epithelial cells reveals common expression profiles. Breast Cancer Res Treat 2011 1.15
14 A functional annotation of subproteomes in human plasma. Proteomics 2005 1.15
15 Identifying targets of miR-143 using a SILAC-based proteomic approach. Mol Biosyst 2010 1.12
16 Proteomic analysis of Chinese hamster ovary cells. J Proteome Res 2012 1.11
17 Identification of secreted proteins that mediate cell-cell interactions in an in vitro model of the lung cancer microenvironment. Cancer Res 2008 1.09
18 Temporal profiling of the secretome during adipogenesis in humans. J Proteome Res 2010 1.07
19 Identification of c-Src tyrosine kinase substrates using mass spectrometry and peptide microarrays. J Proteome Res 2008 1.06
20 Assessment of resolution parameters for CID-based shotgun proteomic experiments on the LTQ-Orbitrap mass spectrometer. J Am Soc Mass Spectrom 2010 1.05
21 TSLP signaling network revealed by SILAC-based phosphoproteomics. Mol Cell Proteomics 2012 1.04
22 SILAC-based quantitative proteomic approach to identify potential biomarkers from the esophageal squamous cell carcinoma secretome. Cancer Biol Ther 2010 1.00
23 SILAC for global phosphoproteomic analysis. Methods Mol Biol 2009 0.99
24 Quantitative tissue proteomics of esophageal squamous cell carcinoma for novel biomarker discovery. Cancer Biol Ther 2011 0.99
25 Screening for therapeutic targets of vorinostat by SILAC-based proteomic analysis in human breast cancer cells. Proteomics 2010 0.99
26 The Escherichia coli phosphotyrosine proteome relates to core pathways and virulence. PLoS Pathog 2013 0.94
27 Proteogenomic analysis of Candida glabrata using high resolution mass spectrometry. J Proteome Res 2011 0.92
28 Comprehensive proteomic analysis of human bile. Proteomics 2011 0.92
29 Identification of targets of c-Src tyrosine kinase by chemical complementation and phosphoproteomics. Mol Cell Proteomics 2012 0.90
30 Proteomic characterization of Her2/neu-overexpressing breast cancer cells. Proteomics 2010 0.90
31 A proteogenomic approach to map the proteome of an unsequenced pathogen - Leishmania donovani. Proteomics 2012 0.88
32 SILAC-based quantitative proteomic analysis of gastric cancer secretome. Proteomics Clin Appl 2013 0.87
33 Identifying novel targets of oncogenic EGF receptor signaling in lung cancer through global phosphoproteomics. Proteomics 2015 0.86
34 Proteome profiling of wild type and lumican-deficient mouse corneas. J Proteomics 2011 0.85
35 Quantitative phosphoproteomics reveals crosstalk between phosphorylation and O-GlcNAc in the DNA damage response pathway. Proteomics 2015 0.85
36 Identification and properties of anti-chaperone-like peptides derived from oxidized bovine lens betaL-crystallins. J Biol Chem 2002 0.83
37 Monoclonal antibody cocktail as an enrichment tool for acetylome analysis. Anal Chem 2011 0.83
38 Regulation of lipid metabolism by Dicer revealed through SILAC mice. J Proteome Res 2012 0.82
39 Quantitative proteomics for identifying biomarkers for tuberculous meningitis. Clin Proteomics 2012 0.82
40 Application of mass spectrometry-based proteomics for biomarker discovery in neurological disorders. Ann Indian Acad Neurol 2009 0.82
41 Integrated proteomic and metabolic analysis of breast cancer progression. PLoS One 2013 0.81
42 Quantitative proteomics for identifying biomarkers for Rabies. Clin Proteomics 2013 0.81
43 Serotonin in pre-implantation mouse embryos is localized to the mitochondria and can modulate mitochondrial potential. Reproduction 2008 0.81
44 The interactome of a PTB domain-containing adapter protein, Odin, revealed by SILAC. J Proteomics 2010 0.80
45 Identification of putative biomarkers for HIV-associated neurocognitive impairment in the CSF of HIV-infected patients under cART therapy determined by mass spectrometry. J Neurovirol 2014 0.79
46 Genome-wide profiling of pluripotent cells reveals a unique molecular signature of human embryonic germ cells. PLoS One 2012 0.79
47 Transcriptomic Profiling of Medial Temporal Lobe Epilepsy. J Proteomics Bioinform 2012 0.78
48 Identification of miR-145 targets through an integrated omics analysis. Mol Biosyst 2014 0.77
49 Unbiased discovery of interactions at a control locus driving expression of the cancer-specific therapeutic and diagnostic target, mesothelin. J Proteome Res 2012 0.75