Published in Int Immunol on September 02, 2008
A mathematical model for the reciprocal differentiation of T helper 17 cells and induced regulatory T cells. PLoS Comput Biol (2011) 1.18
Diversity and plasticity of Th cell types predicted from regulatory network modelling. PLoS Comput Biol (2010) 1.17
Mapping differentiation under mixed culture conditions reveals a tunable continuum of T cell fates. PLoS Biol (2013) 1.04
A simple theoretical framework for understanding heterogeneous differentiation of CD4+ T cells. BMC Syst Biol (2012) 0.97
Cellular and population plasticity of helper CD4(+) T cell responses. Front Physiol (2013) 0.96
Competition for antigen between Th1 and Th2 responses determines the timing of the immune response switch during Mycobaterium avium subspecies paratuberulosis infection in ruminants. PLoS Comput Biol (2014) 0.91
Computational modeling of heterogeneity and function of CD4+ T cells. Front Cell Dev Biol (2014) 0.86
Model checking to assess T-helper cell plasticity. Front Bioeng Biotechnol (2015) 0.83
An integrative computational systems biology approach identifies differentially regulated dynamic transcriptome signatures which drive the initiation of human T helper cell differentiation. BMC Genomics (2012) 0.83
A Mathematical Framework for Understanding Four-Dimensional Heterogeneous Differentiation of CD4+ T Cells. Bull Math Biol (2015) 0.77
Diverse continuum of CD4(+) T-cell states is determined by hierarchical additive integration of cytokine signals. Proc Natl Acad Sci U S A (2017) 0.75
Demystifying the cytokine network: Mathematical models point the way. Cytokine (2016) 0.75
In vivo labeling with 2H2O reveals a human neutrophil lifespan of 5.4 days. Blood (2010) 4.84
Heterogeneous differentiation patterns of individual CD8+ T cells. Science (2013) 2.54
Maintenance of peripheral naive T cells is sustained by thymus output in mice but not humans. Immunity (2012) 2.41
Lymph node topology dictates T cell migration behavior. J Exp Med (2007) 2.19
Diverse and heritable lineage imprinting of early haematopoietic progenitors. Nature (2013) 2.19
HLA alleles associated with slow progression to AIDS truly prefer to present HIV-1 p24. PLoS One (2007) 1.77
Sparse production but preferential incorporation of recently produced naive T cells in the human peripheral pool. Proc Natl Acad Sci U S A (2008) 1.62
Analysing immune cell migration. Nat Rev Immunol (2009) 1.52
Thymic output: a bad TREC record. Nat Immunol (2003) 1.50
Tissue-resident memory CD8+ T cells continuously patrol skin epithelia to quickly recognize local antigen. Proc Natl Acad Sci U S A (2012) 1.50
Quantifying cell turnover using CFSE data. J Immunol Methods (2005) 1.38
Spatial modelling of brief and long interactions between T cells and dendritic cells. Immunol Cell Biol (2007) 1.28
Quantification of T-cell dynamics: from telomeres to DNA labeling. Immunol Rev (2007) 1.18
Comprehensive assessment and mathematical modeling of T cell population dynamics and homeostasis. J Immunol (2008) 1.15
Amino acid similarity accounts for T cell cross-reactivity and for "holes" in the T cell repertoire. PLoS One (2008) 1.11
Lineage-specific T-cell reconstitution following in vivo CD4+ and CD8+ lymphocyte depletion in nonhuman primates. Blood (2010) 1.08
Immune activation and collateral damage in AIDS pathogenesis. Front Immunol (2013) 1.08
Decline in excision circles requires homeostatic renewal or homeostatic death of naive T cells. J Theor Biol (2003) 1.05
Establishment of the CD4+ T-cell pool in healthy children and untreated children infected with HIV-1. Blood (2004) 1.01
Closing the gap between T-cell life span estimates from stable isotope-labeling studies in mice and humans. Blood (2013) 1.01
B cells within germinal centers migrate preferentially from dark to light zone. Proc Natl Acad Sci U S A (2011) 1.00
Virus encoded MHC-like decoys diversify the inhibitory KIR repertoire. PLoS Comput Biol (2013) 1.00
Differential cytokine profiles in juvenile idiopathic arthritis subtypes revealed by cluster analysis. Rheumatology (Oxford) (2009) 1.00
Polar auxin transport: models and mechanisms. Development (2013) 0.99
Towards estimating the true duration of dendritic cell interactions with T cells. J Immunol Methods (2009) 0.98
Depletion of naive CD4 T cells by CXCR4-using HIV-1 variants occurs mainly through increased T-cell death and activation. AIDS (2003) 0.98
Degenerate T-cell recognition of peptides on MHC molecules creates large holes in the T-cell repertoire. PLoS Comput Biol (2012) 0.97
Activation-threshold tuning in an affinity model for the T-cell repertoire. Proc Biol Sci (2004) 0.94
Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome. Immunogenetics (2003) 0.93
The effects of age, thymectomy, and HIV Infection on alpha and beta TCR excision circles in naive T cells. J Immunol (2006) 0.91
The rate of immune escape vanishes when multiple immune responses control an HIV infection. J Immunol (2013) 0.91
Lymphocyte maintenance during healthy aging requires no substantial alterations in cellular turnover. Aging Cell (2015) 0.90
Chemotactic migration of T cells towards dendritic cells promotes the detection of rare antigens. PLoS Comput Biol (2012) 0.88
Discriminating self from nonself with short peptides from large proteomes. Immunogenetics (2004) 0.88
Reliable reconstruction of HIV-1 whole genome haplotypes reveals clonal interference and genetic hitchhiking among immune escape variants. Retrovirology (2014) 0.88
A mathematical model of protein degradation by the proteasome. Biophys J (2005) 0.87
The distribution of CTL epitopes in HIV-1 appears to be random, and similar to that of other proteomes. BMC Evol Biol (2009) 0.86
The specificity and polymorphism of the MHC class I prevents the global adaptation of HIV-1 to the monomorphic proteasome and TAP. PLoS One (2008) 0.85
The contribution of the thymus to the recovery of peripheral naive T-cell numbers during antiretroviral treatment for HIV infection. J Acquir Immune Defic Syndr (2008) 0.84
Quantification of naive and memory T-cell turnover during HIV-1 infection. AIDS (2015) 0.82
Cell division curtails helper phenotype plasticity and expedites helper T-cell differentiation. Immunol Cell Biol (2012) 0.79
Improving the estimation of the death rate of infected cells from time course data during the acute phase of virus infections: application to acute HIV-1 infection in a humanized mouse model. Theor Biol Med Model (2014) 0.78
Early divergence of Th1 and Th2 transcriptomes involves a small core response and sets of transiently expressed genes. Eur J Immunol (2013) 0.76
Analytical results on the Beauchemin model of lymphocyte migration. BMC Bioinformatics (2013) 0.76
A generalized mathematical model to estimate T- and B-cell receptor diversities using AmpliCot. Biophys J (2012) 0.75