Rank |
Title |
Journal |
Year |
PubWeight™‹?› |
1
|
MODOMICS: a database of RNA modification pathways--2013 update.
|
Nucleic Acids Res
|
2012
|
4.43
|
2
|
tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.
|
RNA
|
2002
|
3.88
|
3
|
MODOMICS: a database of RNA modification pathways. 2008 update.
|
Nucleic Acids Res
|
2008
|
2.84
|
4
|
MODOMICS: a database of RNA modification pathways.
|
Nucleic Acids Res
|
2006
|
1.95
|
5
|
Transfer RNA paralogs: evidence for genetic code-amino acid biosynthesis coevolution and an archaeal root of life.
|
Gene
|
2003
|
1.71
|
6
|
Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop.
|
EMBO J
|
2002
|
1.66
|
7
|
Identification of BHB splicing motifs in intron-containing tRNAs from 18 archaea: evolutionary implications.
|
RNA
|
2003
|
1.64
|
8
|
A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase.
|
Nucleic Acids Res
|
2004
|
1.44
|
9
|
Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria--evolutionary implications.
|
Nucleic Acids Res
|
2005
|
1.39
|
10
|
Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures.
|
Nucleic Acids Res
|
2003
|
1.35
|
11
|
Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA.
|
Mol Cell Biol
|
2005
|
1.35
|
12
|
N2-methylation of guanosine at position 10 in tRNA is catalyzed by a THUMP domain-containing, S-adenosylmethionine-dependent methyltransferase, conserved in Archaea and Eukaryota.
|
J Biol Chem
|
2004
|
1.34
|
13
|
Biosynthesis of wyosine derivatives in tRNA: an ancient and highly diverse pathway in Archaea.
|
Mol Biol Evol
|
2010
|
1.28
|
14
|
The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications.
|
Nucleic Acids Res
|
2006
|
1.28
|
15
|
Formation of the conserved pseudouridine at position 55 in archaeal tRNA.
|
Nucleic Acids Res
|
2006
|
1.15
|
16
|
Comparative RNomics and modomics in Mollicutes: prediction of gene function and evolutionary implications.
|
IUBMB Life
|
2007
|
1.14
|
17
|
Lack of pseudouridine 38/39 in the anticodon arm of yeast cytoplasmic tRNA decreases in vivo recoding efficiency.
|
J Biol Chem
|
2002
|
1.08
|
18
|
Acquisition of a bacterial RumA-type tRNA(uracil-54, C5)-methyltransferase by Archaea through an ancient horizontal gene transfer.
|
Mol Microbiol
|
2007
|
1.05
|
19
|
THUMP from archaeal tRNA:m22G10 methyltransferase, a genuine autonomously folding domain.
|
Nucleic Acids Res
|
2006
|
1.04
|
20
|
Pseudouridylation at position 32 of mitochondrial and cytoplasmic tRNAs requires two distinct enzymes in Saccharomyces cerevisiae.
|
J Biol Chem
|
2004
|
0.98
|
21
|
Distribution and frequencies of post-transcriptional modifications in tRNAs.
|
RNA Biol
|
2014
|
0.97
|
22
|
Recognition by tryptophanyl-tRNA synthetases of discriminator base on tRNATrp from three biological domains.
|
J Biol Chem
|
2002
|
0.97
|
23
|
The archaeal COG1901/DUF358 SPOUT-methyltransferase members, together with pseudouridine synthase Pus10, catalyze the formation of 1-methylpseudouridine at position 54 of tRNA.
|
RNA
|
2012
|
0.97
|
24
|
Crystal structure of tRNA N2,N2-guanosine dimethyltransferase Trm1 from Pyrococcus horikoshii.
|
J Mol Biol
|
2008
|
0.96
|
25
|
Archease from Pyrococcus abyssi improves substrate specificity and solubility of a tRNA m5C methyltransferase.
|
J Biol Chem
|
2007
|
0.95
|
26
|
A single methyltransferase YefA (RlmCD) catalyses both m5U747 and m5U1939 modifications in Bacillus subtilis 23S rRNA.
|
Nucleic Acids Res
|
2011
|
0.94
|
27
|
In vitro detection of the enzymatic activity of folate-dependent tRNA (Uracil-54,-C5)-methyltransferase: evolutionary implications.
|
Methods Enzymol
|
2007
|
0.94
|
28
|
Identity elements required for enzymatic formation of N2,N2-dimethylguanosine from N2-monomethylated derivative and its possible role in avoiding alternative conformations in archaeal tRNA.
|
J Mol Biol
|
2006
|
0.94
|
29
|
Life without the essential bacterial tRNA Ile2-lysidine synthetase TilS: a case of tRNA gene recruitment in Bacillus subtilis.
|
Mol Microbiol
|
2011
|
0.89
|
30
|
Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.
|
RNA
|
2011
|
0.88
|
31
|
Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA.
|
J Mol Biol
|
2007
|
0.85
|
32
|
Specificity shifts in the rRNA and tRNA nucleotide targets of archaeal and bacterial m5U methyltransferases.
|
RNA
|
2010
|
0.84
|
33
|
Life without tRNAArg-adenosine deaminase TadA: evolutionary consequences of decoding the four CGN codons as arginine in Mycoplasmas and other Mollicutes.
|
Nucleic Acids Res
|
2013
|
0.82
|
34
|
The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)-methyltransferase provides insights into its tRNA specificity.
|
Nucleic Acids Res
|
2008
|
0.82
|
35
|
Decoding in Candidatus Riesia pediculicola, close to a minimal tRNA modification set?
|
Trends Cell Mol Biol
|
2012
|
0.82
|
36
|
RNA-methyltransferase TrmA is a dual-specific enzyme responsible for C5-methylation of uridine in both tmRNA and tRNA.
|
RNA Biol
|
2013
|
0.82
|
37
|
Life without tRNAIle-lysidine synthetase: translation of the isoleucine codon AUA in Bacillus subtilis lacking the canonical tRNA2Ile.
|
Nucleic Acids Res
|
2013
|
0.81
|
38
|
Effect of a quaternary pentamine on RNA stabilization and enzymatic methylation.
|
Biol Chem
|
2009
|
0.81
|
39
|
Characterization and structure of the Aquifex aeolicus protein DUF752: a bacterial tRNA-methyltransferase (MnmC2) functioning without the usually fused oxidase domain (MnmC1).
|
J Biol Chem
|
2012
|
0.80
|
40
|
The carboxyl-terminal extension of yeast tRNA m5C methyltransferase enhances the catalytic efficiency of the amino-terminal domain.
|
J Biol Chem
|
2007
|
0.79
|
41
|
Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.
|
J Mol Biol
|
2010
|
0.78
|