Published in BMC Bioinformatics on December 12, 2008
Whole genome sequencing reveals complex evolution patterns of multidrug-resistant Mycobacterium tuberculosis Beijing strains in patients. PLoS One (2013) 1.30
Mixed sequence reader: a program for analyzing DNA sequences with heterozygous base calling. ScientificWorldJournal (2012) 0.99
Emerging strengths in Asia Pacific bioinformatics. BMC Bioinformatics (2008) 0.98
A simple strain typing assay for Trypanosoma cruzi: discrimination of major evolutionary lineages from a single amplification product. PLoS Negl Trop Dis (2012) 0.94
CHILD: a new tool for detecting low-abundance insertions and deletions in standard sequence traces. Nucleic Acids Res (2011) 0.91
Atypical epigenetic mark in an atypical location: cytosine methylation at asymmetric (CNN) sites within the body of a non-repetitive tomato gene. BMC Plant Biol (2011) 0.81
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novoSNP, a novel computational tool for sequence variation discovery. Genome Res (2005) 7.42
Genome-wide association study shows BCL11A associated with persistent fetal hemoglobin and amelioration of the phenotype of beta-thalassemia. Proc Natl Acad Sci U S A (2008) 5.27
Functional variants in the B-cell gene BANK1 are associated with systemic lupus erythematosus. Nat Genet (2008) 5.00
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Automated identification of single nucleotide polymorphisms from sequencing data. J Bioinform Comput Biol (2003) 1.31
A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform. Nucleic Acids Res (2007) 1.14
preAssemble: a tool for automatic sequencer trace data processing. BMC Bioinformatics (2006) 1.04
Evaluation of resequencing on number of tag SNPs of 13 atherosclerosis-related genes in Thai population. J Hum Genet (2007) 0.91
Effects of sample re-sequencing and trimming on the quality and size of assembled consensus sequences. Genet Mol Res (2007) 0.81
Mapping human genetic diversity in Asia. Science (2009) 7.40
Simple linear model provides highly accurate genotypic predictions of HIV-1 drug resistance. Antivir Ther (2004) 1.41
WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations. BMC Genomics (2007) 1.19
Hypomethylation of intragenic LINE-1 represses transcription in cancer cells through AGO2. PLoS One (2011) 1.18
RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation. BMC Genomics (2009) 1.17
An automatic device for detection and classification of malaria parasite species in thick blood film. BMC Bioinformatics (2012) 1.15
Detecting purely epistatic multi-locus interactions by an omnibus permutation test on ensembles of two-locus analyses. BMC Bioinformatics (2009) 1.13
PanSNPdb: the Pan-Asian SNP genotyping database. PLoS One (2011) 1.10
microPIR: an integrated database of microRNA target sites within human promoter sequences. PLoS One (2012) 1.04
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Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countries. Bioinformatics (2007) 0.99
Draft genome sequence of Arthrospira platensis C1 (PCC9438). Stand Genomic Sci (2012) 0.96
Outlook on Thailand's genomics and computational biology research and development. PLoS Comput Biol (2008) 0.94
Association between ADAM33 polymorphisms and asthma in a Thai population. Asian Pac J Allergy Immunol (2008) 0.93
Iterative pruning PCA improves resolution of highly structured populations. BMC Bioinformatics (2009) 0.91
Evaluation of resequencing on number of tag SNPs of 13 atherosclerosis-related genes in Thai population. J Hum Genet (2007) 0.91
Metagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand. BMC Genomics (2012) 0.91
iLOCi: a SNP interaction prioritization technique for detecting epistasis in genome-wide association studies. BMC Genomics (2012) 0.90
Structural optimization and de novo design of dengue virus entry inhibitory peptides. PLoS Negl Trop Dis (2010) 0.90
Structural insights into the cellular retinaldehyde-binding protein (CRALBP). Proteins (2005) 0.88
Homology modeling of mosquito cytochrome P450 enzymes involved in pyrethroid metabolism: insights into differences in substrate selectivity. BMC Res Notes (2011) 0.87
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Viral entry inhibitors block dengue antibody-dependent enhancement in vitro. Antiviral Res (2010) 0.86
Study of large and highly stratified population datasets by combining iterative pruning principal component analysis and structure. BMC Bioinformatics (2011) 0.85
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Improved accuracy of HIV-1 genotypic susceptibility interpretation using a consensus approach. AIDS (2004) 0.82
Insight into the peopling of Mainland Southeast Asia from Thai population genetic structure. PLoS One (2013) 0.82
Germline and somatic DICER1 mutations in a pituitary blastoma causing infantile-onset Cushing's disease. J Clin Endocrinol Metab (2014) 0.80
Combination of multiplex PCR and DHPLC-based strategy for CYP2D6 genotyping scheme in Thais. Clin Biochem (2011) 0.80
Prediction of avian influenza A binding preference to human receptor using conformational analysis of receptor bound to hemagglutinin. BMC Genomics (2009) 0.80
Prevalence of HIV-1 polymerase gene mutations in pre-treated patients in Thailand. Southeast Asian J Trop Med Public Health (2002) 0.79
Binding capacity of ER-α ligands and SERMs: comparison of the human, dog and cat. Asian Pac J Cancer Prev (2011) 0.79
Biomarker selection and classification of "-omics" data using a two-step bayes classification framework. Biomed Res Int (2013) 0.79
Distal effect of amino acid substitutions in CYP2C9 polymorphic variants causes differences in interatomic interactions against (S)-warfarin. PLoS One (2013) 0.78
Identification of potential multitarget antimalarial drugs. JAMA (2005) 0.78
Automatic DNA Diagnosis for 1D Gel Electrophoresis Images using Bio-image Processing Technique. BMC Genomics (2015) 0.78
Speedup bioinformatics applications on multicore-based processor using vectorizing and multithreading strategies. Bioinformation (2007) 0.77
An abundance of population-specific monomorphic SNPs may or may not be meaningful: a commentary on differences in allele frequencies of familial hypercholesterolemia SNPs in the Malaysian population. J Hum Genet (2012) 0.75
Transmission of rabies from an organ donor. N Engl J Med (2005) 0.75
Molecular dynamics simulation of a human thiopurine S-methyltransferase complexed with 6-mercaptopurine model. Bioinformation (2009) 0.75
MetaSel: a metaphase selection tool using a Gaussian-based classification technique. BMC Bioinformatics (2013) 0.75
Modeling of pyruvate decarboxylases from ethanol producing bacteria. Bioinformation (2010) 0.75
How bio-questionable are the different recombinant human erythropoietin copy products in Thailand? Pharm Res (2013) 0.75
Dried blood spot technology for CD4+ T-cell counting. Lancet (2004) 0.75
Population structure of four Thai indigenous chicken breeds. BMC Genet (2014) 0.75
Molecular dynamics of interactions between rigid and flexible antifolates and dihydrofolate reductase from pyrimethamine-sensitive and pyrimethamine-resistant Plasmodium falciparum. Chem Biol Drug Des (2014) 0.75
Prevalence of HIV-1 drug resistance in antiretroviral-naive pregnant Thai women. Southeast Asian J Trop Med Public Health (2002) 0.75
Structural and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand. BMC Genomics (2014) 0.75
Computational analyses of curcuminoid analogs against kinase domain of HER2. BMC Bioinformatics (2014) 0.75
Pre-docking filter for protein and ligand 3D structures. Bioinformation (2008) 0.75
Subtype-specific HIV type 1 genotypic susceptibility interpretation. AIDS Res Hum Retroviruses (2008) 0.75
pHCR: a parallel haplotype configuration reduction algorithm for haplotype interaction analysis. J Hum Genet (2009) 0.75
Comparative view of in silico DNA sequencing analysis tools. Methods Mol Biol (2011) 0.75
Small Ancestry Informative Marker panels for complete classification between the original four HapMap populations. Int J Data Min Bioinform (2012) 0.75
Molecular dynamics simulations reveal structural instability of human trypsin inhibitor upon D50E and Y54H mutations. J Mol Model (2012) 0.75
Sex Steroids Regulate Expression of Genes Containing Long Interspersed Elements-1s in Breast Cancer Cells. Asian Pac J Cancer Prev (2016) 0.75
iNJclust: Iterative Neighbor-Joining Tree Clustering Framework for Inferring Population Structure. IEEE/ACM Trans Comput Biol Bioinform (2015) 0.75