Published in Appl Environ Microbiol on March 27, 2009
Innate immune responses activated in Arabidopsis roots by microbe-associated molecular patterns. Plant Cell (2010) 2.28
Conservation and diversity of seed associated endophytes in Zea across boundaries of evolution, ethnography and ecology. PLoS One (2011) 1.60
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes. Microbiol Mol Biol Rev (2015) 1.51
Rice root-associated bacteria: insights into community structures across 10 cultivars. FEMS Microbiol Ecol (2011) 1.46
Dynamics of seed-borne rice endophytes on early plant growth stages. PLoS One (2012) 1.32
Methylobacterium-induced endophyte community changes correspond with protection of plants against pathogen attack. PLoS One (2012) 0.92
Effect of bacterial inoculation, plant genotype and developmental stage on root-associated and endophytic bacterial communities in potato (Solanum tuberosum). Antonie Van Leeuwenhoek (2010) 0.92
The new species Enterobacter oryziphilus sp. nov. and Enterobacter oryzendophyticus sp. nov. are key inhabitants of the endosphere of rice. BMC Microbiol (2013) 0.82
Bacterial communities associated with Chenopodium album and Stellaria media seeds from arable soils. Microb Ecol (2011) 0.82
Isolation and characterization of a β-propeller gene containing phosphobacterium Bacillus subtilis strain KPS-11 for growth promotion of potato (Solanum tuberosum L.). Front Microbiol (2015) 0.81
Different selective effects on rhizosphere bacteria exerted by genetically modified versus conventional potato lines. PLoS One (2013) 0.81
Understanding cultivar-specificity and soil determinants of the cannabis microbiome. PLoS One (2014) 0.80
Effect of plant age on endophytic bacterial diversity of balloon flower (Platycodon grandiflorum) root and their antimicrobial activities. Curr Microbiol (2010) 0.79
Differential Response of Potato Toward Inoculation with Taxonomically Diverse Plant Growth Promoting Rhizobacteria. Front Plant Sci (2016) 0.78
Microbial population dynamics in response to Pectobacterium atrosepticum infection in potato tubers. Sci Rep (2015) 0.77
Bio-preparates support the productivity of potato plants grown under desert farming conditions of north Sinai: Five years of field trials. J Adv Res (2013) 0.77
Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest. PLoS One (2016) 0.75
Effect of Acinetobacter sp on metalaxyl degradation and metabolite profile of potato seedlings (Solanum tuberosum L.) alpha variety. PLoS One (2012) 0.75
Isolation of endophytic bacteria from arboreal species of the Amazon and identification by sequencing of the 16S rRNA encoding gene. Genet Mol Biol (2011) 0.75
The Anti-Phytophthora Effect of Selected Potato-Associated Pseudomonas Strains: From the Laboratory to the Field. Front Microbiol (2015) 0.75
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Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microbiol (2001) 4.28
Properties of bacterial endophytes and their proposed role in plant growth. Trends Microbiol (2008) 3.25
The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L. Microb Ecol (2001) 3.19
Flagella of a plant-growth-stimulating Pseudomonas fluorescens strain are required for colonization of potato roots. J Bacteriol (1987) 3.00
DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities. FEMS Microbiol Lett (1992) 2.23
Analysis of the dynamics of bacterial communities in the rhizosphere of the chrysanthemum via denaturing gradient gel electrophoresis and substrate utilization patterns Appl Environ Microbiol (1998) 2.09
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Acyl-homoserine lactone production is more common among plant-associated Pseudomonas spp. than among soilborne Pseudomonas spp. Appl Environ Microbiol (2001) 1.74
Organic acids, sugars, and L-tryptophane in exudates of vegetables growing on stonewool and their effects on activities of rhizosphere bacteria. Mol Plant Microbe Interact (2006) 1.64
Analysis of Endophytic Bacterial Communities of Potato by Plating and Denaturing Gradient Gel Electrophoresis (DGGE) of 16S rDNA Based PCR Fragments. Microb Ecol (2001) 1.63
Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.). FEMS Microbiol Ecol (2008) 1.60
Induction of systemic resistance in tomato by N-acyl-L-homoserine lactone-producing rhizosphere bacteria. Plant Cell Environ (2006) 1.59
Multivariate analyses of Burkholderia species in soil: effect of crop and land use history. Appl Environ Microbiol (2004) 1.54
Induced Systemic Resistance by Fluorescent Pseudomonas spp. Phytopathology (2007) 1.46
Effects of T4 lysozyme release from transgenic potato roots on bacterial rhizosphere communities are negligible relative to natural factors. Appl Environ Microbiol (2002) 1.38
Root colonization by phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391 is essential for biocontrol of tomato foot and root rot. Mol Plant Microbe Interact (2000) 1.38
Effect of above-ground plant species on soil microbial community structure and its impact on suppression of Rhizoctonia solani AG3. Environ Microbiol (2006) 1.36
Root Exudate-Induced Promoter Activity in Pseudomonas fluorescens Mutants in the Wheat Rhizosphere. Appl Environ Microbiol (1995) 1.33
Endophytic colonization of rice by a diazotrophic strain of Serratia marcescens. J Bacteriol (2001) 1.32
Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol-degrading soil microbial community. Appl Environ Microbiol (2005) 1.30
Polymorphisms within the prnD and pltC genes from pyrrolnitrin and pyoluteorin-producing Pseudomonas and Burkholderia spp. FEMS Microbiol Ecol (2003) 1.25
Endophytic colonization of Vitis vinifera L. by Burkholderia phytofirmans strain PsJN: from the rhizosphere to inflorescence tissues. FEMS Microbiol Ecol (2008) 1.21
Impact of agricultural practices on the Zea mays L. endophytic community. Appl Environ Microbiol (2004) 1.20
Genetic basis in plants for interactions with disease-suppressive bacteria. Proc Natl Acad Sci U S A (1999) 1.16
Pseudomonas community structure and antagonistic potential in the rhizosphere: insights gained by combining phylogenetic and functional gene-based analyses. Environ Microbiol (2007) 1.14
Endophytic Colonization of Plants by the Biocontrol Agent Rhizobium etli G12 in Relation to Meloidogyne incognita Infection. Phytopathology (2001) 1.14
A Nitrogen-Fixing Endophyte of Sugarcane Stems (A New Role for the Apoplast). Plant Physiol (1994) 1.08
Assessment of the diversity, and antagonism towards Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes. FEMS Microbiol Ecol (2004) 0.97
Model plants for studying the interaction between Methylobacterium mesophilicum and Xylella fastidiosa. Can J Microbiol (2006) 0.96
Identification and specific detection of a novel pseudomonadaceae cluster associated with soils from winter wheat plots of a long-term agricultural field experiment. Appl Environ Microbiol (2006) 0.95
The Low-Temperature-Induced Viable-But-Nonculturable State Affects the Virulence of Ralstonia solanacearum Biovar 2. Phytopathology (2004) 0.85
Identification of nif genes in N2-fixing bacterial strains isolated from rice fields along the Yangtze River Plain. J Basic Microbiol (2006) 0.84
A polyphasic approach for studying the interaction between Ralstonia solanacearum and potential control agents in the tomato phytosphere. J Microbiol Methods (2002) 0.81
Influence of tomato genotype on growth of inoculated and indigenous bacteria in the spermosphere. Appl Environ Microbiol (2001) 0.81
Induction of plant defense gene expression by plant activators and Pseudomonas syringae pv. tomato in greenhouse-grown tomatoes. Phytopathology (2008) 0.80
Leaf position prevails over plant age and leaf age in reflecting resistance to late blight in potato. Phytopathology (2003) 0.78
The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. Microbiology (2002) 1.97
Comparative analysis of bacterial communities in a potato field as determined by pyrosequencing. PLoS One (2011) 1.64
Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.). FEMS Microbiol Ecol (2008) 1.60
Multivariate analyses of Burkholderia species in soil: effect of crop and land use history. Appl Environ Microbiol (2004) 1.54
Effects of plant genotype and growth stage on the betaproteobacterial communities associated with different potato cultivars in two fields. Appl Environ Microbiol (2010) 1.49
Mangrove bacterial diversity and the impact of oil contamination revealed by pyrosequencing: bacterial proxies for oil pollution. PLoS One (2011) 1.48
Rice root-associated bacteria: insights into community structures across 10 cultivars. FEMS Microbiol Ecol (2011) 1.46
Dynamics of seed-borne rice endophytes on early plant growth stages. PLoS One (2012) 1.32
Molecular method to assess the diversity of Burkholderia species in environmental samples. Appl Environ Microbiol (2002) 1.27
Exploration of hitherto-uncultured bacteria from the rhizosphere. FEMS Microbiol Ecol (2009) 1.26
Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved? ISME J (2008) 1.21
Mechanisms that promote bacterial fitness in fungal-affected soil microhabitats. FEMS Microbiol Ecol (2009) 1.20
Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust. ISME J (2013) 1.14
Effect of DNA extraction method on the apparent microbial diversity of soil. Appl Environ Microbiol (2010) 1.13
Use of 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep. Microb Ecol (2007) 1.13
Spatial and temporal variation of archaeal, bacterial and fungal communities in agricultural soils. PLoS One (2012) 1.11
Novel multispecies microbial consortia involved in lignocellulose and 5-hydroxymethylfurfural bioconversion. Appl Microbiol Biotechnol (2013) 1.10
Soil-specific limitations for access and analysis of soil microbial communities by metagenomics. FEMS Microbiol Ecol (2011) 1.08
Seasonal variations in the diversity and abundance of diazotrophic communities across soils. FEMS Microbiol Ecol (2011) 1.05
Analysis of bacterial communities in soil by use of denaturing gradient gel electrophoresis and clone libraries, as influenced by different reverse primers. Appl Environ Microbiol (2008) 1.02
Resource pulses can alleviate the biodiversity-invasion relationship in soil microbial communities. Ecology (2015) 1.02
Land use intensity controls actinobacterial community structure. Microb Ecol (2010) 0.98
Prevalence of streptomycin-resistance genes in bacterial populations in European habitats. FEMS Microbiol Ecol (2002) 0.96
Model plants for studying the interaction between Methylobacterium mesophilicum and Xylella fastidiosa. Can J Microbiol (2006) 0.96
Microbial community response to a simulated hydrocarbon spill in mangrove sediments. J Microbiol (2010) 0.95
Physical-chemical and microbiological changes in Cerrado Soil under differing sugarcane harvest management systems. BMC Microbiol (2012) 0.93
Genomics of pyrrolnitrin biosynthetic loci: evidence for conservation and whole-operon mobility within gram-negative bacteria. Environ Microbiol (2008) 0.92
Paenibacillus brasilensis sp. nov., a novel nitrogen-fixing species isolated from the maize rhizosphere in Brazil. Int J Syst Evol Microbiol (2002) 0.92
Insight from the draft genome of Dietzia cinnamea P4 reveals mechanisms of survival in complex tropical soil habitats and biotechnology potential. Antonie Van Leeuwenhoek (2011) 0.92
Root colonization and growth promotion of sunflower (Helianthus annuus L.) by phosphate solubilizing Enterobacter sp. Fs-11. World J Microbiol Biotechnol (2012) 0.91
Comparison of deep-sea sediment microbial communities in the Eastern Mediterranean. FEMS Microbiol Ecol (2008) 0.91
Characterisation of the effect of a simulated hydrocarbon spill on diazotrophs in mangrove sediment mesocosm. Antonie Van Leeuwenhoek (2009) 0.89
Endophytic bacterial communities in three arctic plants from low arctic fell tundra are cold-adapted and host-plant specific. FEMS Microbiol Ecol (2012) 0.89
Application of a novel Paenibacillus-specific PCR-DGGE method and sequence analysis to assess the diversity of Paenibacillus spp. in the maize rhizosphere. J Microbiol Methods (2003) 0.89
Real-time PCR detection of Holophagae (Acidobacteria) and Verrucomicrobia subdivision 1 groups in bulk and leek (Allium porrum) rhizosphere soils. J Microbiol Methods (2010) 0.89
Fluctuations in Ammonia Oxidizing Communities Across Agricultural Soils are Driven by Soil Structure and pH. Front Microbiol (2012) 0.87
Mining of unexplored habitats for novel chitinases--chiA as a helper gene proxy in metagenomics. Appl Microbiol Biotechnol (2012) 0.87
Bacterial chitinolytic communities respond to chitin and pH alteration in soil. Appl Environ Microbiol (2012) 0.86
Bacterial genomes: habitat specificity and uncharted organisms. Microb Ecol (2012) 0.84
Evidence for selective bacterial community structuring in the freshwater sponge Ephydatia fluviatilis. Microb Ecol (2012) 0.84
Inhibition of mushroom formation and induction of glycerol release-ecological strategies of Burkholderia terrae BS001 to create a hospitable niche at the fungus Lyophyllum sp. strain Karsten. Microb Ecol (2012) 0.84
Isolation and partial characterization of bacterial strains on low organic carbon medium from soils fertilized with different organic amendments. Microb Ecol (2010) 0.84
Soil and cultivar type shape the bacterial community in the potato rhizosphere. Microb Ecol (2011) 0.84
Temporal dynamics of abundance and composition of nitrogen-fixing communities across agricultural soils. PLoS One (2013) 0.84
Temporal dynamics of microbial communities in the rhizosphere of two genetically modified (GM) maize hybrids in tropical agrosystems. Antonie Van Leeuwenhoek (2012) 0.84
Genetic and phenotypic diversity of Ralstonia solanacearum biovar 2 strains obtained from Dutch waterways. Antonie Van Leeuwenhoek (2009) 0.83
Verrucomicrobia subdivision 1 strains display a difference in the colonization of the leek (Allium porrum) rhizosphere. FEMS Microbiol Ecol (2011) 0.83
Rodent species as natural reservoirs of Borrelia burgdorferi sensu lato in different habitats of Ixodes ricinus in The Netherlands. Ticks Tick Borne Dis (2013) 0.83
The new species Enterobacter oryziphilus sp. nov. and Enterobacter oryzendophyticus sp. nov. are key inhabitants of the endosphere of rice. BMC Microbiol (2013) 0.82
Chitin amendment increases soil suppressiveness toward plant pathogens and modulates the actinobacterial and oxalobacteraceal communities in an experimental agricultural field. Appl Environ Microbiol (2013) 0.82
Bacterial communities associated with Chenopodium album and Stellaria media seeds from arable soils. Microb Ecol (2011) 0.82
Adaptation and heterogeneity of Escherichia coli MC1000 growing in complex environments. Appl Environ Microbiol (2012) 0.82
Different selective effects on rhizosphere bacteria exerted by genetically modified versus conventional potato lines. PLoS One (2013) 0.81
The mycosphere constitutes an arena for horizontal gene transfer with strong evolutionary implications for bacterial-fungal interactions. FEMS Microbiol Ecol (2014) 0.81
Normal operating range of bacterial communities in soil used for potato cropping. Appl Environ Microbiol (2012) 0.80
IncP-1 and PromA group plasmids are major providers of horizontal gene transfer capacities across bacteria in the mycosphere of different soil fungi. Microb Ecol (2014) 0.80
Characterization of the Microbial Community Involved in the Suppression of Pythium aphanidermatum in Cucumber Grown on Rockwool. Phytopathology (2005) 0.80
Abundance and genetic diversity of nifH gene sequences in anthropogenically affected Brazilian mangrove sediments. Appl Environ Microbiol (2012) 0.79
Draft genome sequence of the soil bacterium Burkholderia terrae strain BS001, which interacts with fungal surface structures. J Bacteriol (2012) 0.79
Selection of Sphingomonadaceae at the base of Laccaria proxima and Russula exalbicans fruiting bodies. Appl Environ Microbiol (2009) 0.78
Comparative genomics and transcriptomics analysis of experimentally evolved Escherichia coli MC1000 in complex environments. Environ Microbiol (2013) 0.78
A putative genomic island, PGI-1, in Ralstonia solanacearum biovar 2 revealed by subtractive hybridization. Antonie Van Leeuwenhoek (2010) 0.78
Compositional profile of α / β-hydrolase fold proteins in mangrove soil metagenomes: prevalence of epoxide hydrolases and haloalkane dehalogenases in oil-contaminated sites. Microb Biotechnol (2014) 0.77
IncP-1β Plasmids Are Important Carriers of Fitness Traits for Variovorax Species in the Mycosphere--Two Novel Plasmids, pHB44 and pBS64, with Differential Effects Unveiled. Microb Ecol (2014) 0.77
Ralstonia solanacearum ΔPGI-1 strain KZR-5 is affected in growth, response to cold stress and invasion of tomato. Microb Ecol (2010) 0.77
Transcriptional profiling of genes involved in n-hexadecane compounds assimilation in the hydrocarbon degrading Dietzia cinnamea P4 strain. Braz J Microbiol (2013) 0.77
Differential stress resistance and metabolic traits underlie coexistence in a sympatrically evolved bacterial population. Environ Microbiol (2014) 0.76
Ecology of Bacillaceae. Microbiol Spectr (2015) 0.76
A novel salt-tolerant chitobiosidase discovered by genetic screening of a metagenomic library derived from chitin-amended agricultural soil. Appl Microbiol Biotechnol (2015) 0.76
The putative α/β-hydrolases of Dietzia cinnamea P4 strain as potential enzymes for biocatalytic applications. Antonie Van Leeuwenhoek (2012) 0.76
Bacterial structure and characterization of plant growth promoting and oil degrading bacteria from the rhizospheres of mangrove plants. J Microbiol (2011) 0.76
A ribosomal RNA gene intergenic spacer based PCR and DGGE fingerprinting method for the analysis of specific rhizobial communities in soil. J Microbiol Methods (2005) 0.75
Microbial community networks. FEMS Microbiol Ecol (2008) 0.75
Assessment of transformability of bacteria associated with tomato and potato plants. Environ Biosafety Res (2007) 0.75
Sympatric metabolic diversification of experimentally evolved Escherichia coli in a complex environment. Antonie Van Leeuwenhoek (2014) 0.75