Published in Mol Biol Evol on April 22, 2009
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Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates. Proc Natl Acad Sci U S A (2010) 1.35
Comparative genomic and transcriptomic characterization of the toxigenic marine dinoflagellate Alexandrium ostenfeldii. PLoS One (2011) 1.01
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Description of two species of early branching dinoflagellates, Psammosa pacifica n. g., n. sp. and P. atlantica n. sp. PLoS One (2012) 0.84
Transcriptomic study reveals widespread spliced leader trans-splicing, short 5'-UTRs and potential complex carbon fixation mechanisms in the euglenoid Alga Eutreptiella sp. PLoS One (2013) 0.83
Spliced leader RNAs, mitochondrial gene frameshifts and multi-protein phylogeny expand support for the genus Perkinsus as a unique group of alveolates. PLoS One (2011) 0.82
Differential transcription of heat shock protein 90 (HSP90) in the dinoflagellate Prorocentrum minimum by copper and endocrine-disrupting chemicals. Ecotoxicology (2012) 0.81
5S rRNA gene arrangements in protists: a case of nonadaptive evolution. J Mol Evol (2012) 0.79
The alveolate translation initiation factor 4E family reveals a custom toolkit for translational control in core dinoflagellates. BMC Evol Biol (2015) 0.77
Multiple independent insertions of 5S rRNA genes in the spliced-leader gene family of trypanosome species. Curr Genet (2013) 0.76
Spliced leader RNA trans-splicing discovered in copepods. Sci Rep (2015) 0.75
Conserved Transcriptional Responses to Nutrient Stress in Bloom-Forming Algae. Front Microbiol (2017) 0.75
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Spliced leader RNA-mediated trans-splicing in a dinoflagellate, Karenia brevis. J Eukaryot Microbiol (2007) 1.26
Spliced leader RNA-mediated trans-splicing in phylum Rotifera. Mol Biol Evol (2005) 1.21
Isolation and characterization of proliferating cell nuclear antigen from the dinoflagellate Pfiesteria piscicida. J Eukaryot Microbiol (2006) 1.18
Isolation and partial characterization of dinoflagellate U1-U6 small RNAs homologous to rat U small nuclear RNAs. J Biol Chem (1983) 1.18
High-level diversity of dinoflagellates in the natural environment, revealed by assessment of mitochondrial cox1 and cob genes for dinoflagellate DNA barcoding. Appl Environ Microbiol (2008) 1.17
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Two sequence classes of kinetoplastid 5S ribosomal RNA gene revealed among bodonid spliced leader RNA gene arrays. FEMS Microbiol Lett (2001) 0.80
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The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. Science (2005) 7.61
The revised Trypanosoma cruzi subspecific nomenclature: rationale, epidemiological relevance and research applications. Infect Genet Evol (2011) 2.87
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Serious overestimation in quantitative PCR by circular (supercoiled) plasmid standard: microalgal pcna as the model gene. PLoS One (2010) 1.77
Two hybridization events define the population structure of Trypanosoma cruzi. Genetics (2005) 1.70
Transcription in kinetoplastid protozoa: why be normal? Microbes Infect (2003) 1.67
Detection and quantification of Pfiesteria piscicida by using the mitochondrial cytochrome b gene. Appl Environ Microbiol (2002) 1.49
Distinct gene number-genome size relationships for eukaryotes and non-eukaryotes: gene content estimation for dinoflagellate genomes. PLoS One (2009) 1.46
Histone acetylations mark origins of polycistronic transcription in Leishmania major. BMC Genomics (2009) 1.46
Development of a cob-18S rRNA gene real-time PCR assay for quantifying Pfiesteria shumwayae in the natural environment. Appl Environ Microbiol (2005) 1.42
Evolution and pathology in chagas disease--a review. Mem Inst Oswaldo Cruz (2006) 1.33
p21-Activated kinase 1 is required for efficient tumor formation and progression in a Ras-mediated skin cancer model. Cancer Res (2012) 1.32
Exportin 1 mediates nuclear export of the kinetoplastid spliced leader RNA. Eukaryot Cell (2003) 1.22
Trichodesmium--a widespread marine cyanobacterium with unusual nitrogen fixation properties. FEMS Microbiol Rev (2012) 1.20
Isolation and characterization of proliferating cell nuclear antigen from the dinoflagellate Pfiesteria piscicida. J Eukaryot Microbiol (2006) 1.18
The Leishmania tarentolae spliced leader contains determinants for association with polysomes. J Biol Chem (2003) 1.15
A three-gene dinoflagellate phylogeny suggests monophyly of prorocentrales and a basal position for amphidinium and heterocapsa. J Mol Evol (2007) 1.14
Evidence for multiple hybrid groups in Trypanosoma cruzi. Int J Parasitol (2003) 1.13
The determinants of Chagas disease: connecting parasite and host genetics. Curr Mol Med (2004) 1.13
Representing nested semantic information in a linear string of text using XML. Proc AMIA Symp (2002) 1.07
Rescue of fragile X syndrome phenotypes in Fmr1 KO mice by the small-molecule PAK inhibitor FRAX486. Proc Natl Acad Sci U S A (2013) 1.04
SmD1 is required for spliced leader RNA biogenesis. Eukaryot Cell (2004) 1.04
Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region. BMC Genomics (2006) 1.03
Complete cap 4 formation is not required for viability in Trypanosoma brucei. Eukaryot Cell (2006) 1.00
Intragenomic spliced leader RNA array analysis of kinetoplastids reveals unexpected transcribed region diversity in Trypanosoma cruzi. Gene (2005) 0.99
Nuclear, mitochondrial and plastid gene phylogenies of Dinophysis miles (Dinophyceae): evidence of variable types of chloroplasts. PLoS One (2011) 0.98
Targeting AKT with the allosteric AKT inhibitor MK-2206 in non-small cell lung cancer cells with acquired resistance to cetuximab. Cancer Biol Ther (2013) 0.97
Alternative lifestyles: the population structure of Trypanosoma cruzi. Acta Trop (2009) 0.96
PAKs inhibitors ameliorate schizophrenia-associated dendritic spine deterioration in vitro and in vivo during late adolescence. Proc Natl Acad Sci U S A (2014) 0.96
Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex. Mol Cell Biol (2008) 0.95
Further evidence of association of OPRD1 & HTR1D polymorphisms with susceptibility to anorexia nervosa. Biol Psychiatry (2006) 0.95
Trypanosoma cruzi maxicircle heterogeneity in Chagas disease patients from Brazil. Int J Parasitol (2009) 0.95
2'-O-ribose methylation of cap2 in human: function and evolution in a horizontally mobile family. Nucleic Acids Res (2011) 0.94
Diversity of insect trypanosomatids assessed from the spliced leader RNA and 5S rRNA genes and intergenic regions. J Eukaryot Microbiol (2004) 0.94
Mitochondrial cytochrome b mRNA editing in dinoflagellates: possible ecological and evolutionary associations? J Eukaryot Microbiol (2005) 0.93
Hypermethylated cap 4 maximizes Trypanosoma brucei translation. Mol Microbiol (2009) 0.92
The 2'-O-ribose methyltransferase for cap 1 of spliced leader RNA and U1 small nuclear RNA in Trypanosoma brucei. Mol Cell Biol (2007) 0.92
Proof that dinoflagellate spliced leader (DinoSL) is a useful hook for fishing dinoflagellate transcripts from mixed microbial samples: Symbiodinium kawagutii as a case study. Protist (2013) 0.92
The promoter and transcribed regions of the Leishmania tarentolae spliced leader RNA gene array are devoid of nucleosomes. BMC Microbiol (2007) 0.92
Trypanosoma cruzi 5S rRNA arrays define five groups and indicate the geographic origins of an ancestor of the heterozygous hybrids. Int J Parasitol (2005) 0.91
The TbMTr1 spliced leader RNA cap 1 2'-O-ribose methyltransferase from Trypanosoma brucei acts with substrate specificity. J Biol Chem (2007) 0.90
Nucleoside hydrolase from Leishmania (L.) donovani is an antigen diagnostic for visceral leishmaniasis. Mol Biochem Parasitol (2002) 0.90
The Trypanosoma brucei La protein is a candidate poly(U) shield that impacts spliced leader RNA maturation and tRNA intron removal. Int J Parasitol (2005) 0.90
Two functionally distinct ciliates dwelling in Acropora corals in the South China Sea near Sanya, Hainan Province, China. Appl Environ Microbiol (2010) 0.90
Bioremediation efficiency in the removal of dissolved inorganic nutrients by the red seaweed, Porphyra yezoensis, cultivated in the open sea. Water Res (2007) 0.89
Discovery and barcoding by analysis of spliced leader RNA gene sequences of new isolates of Trypanosomatidae from Heteroptera in Costa Rica and Ecuador. J Eukaryot Microbiol (2007) 0.89
Introns, alternative splicing, spliced leader trans-splicing and differential expression of pcna and cyclin in Perkinsus marinus. Protist (2010) 0.88
Differential transcription profiles in Trypanosoma cruzi associated with clinical forms of Chagas disease: Maxicircle NADH dehydrogenase subunit 7 gene truncation in asymptomatic patient isolates. Mol Biochem Parasitol (2006) 0.88
Apical groove type and molecular phylogeny suggests reclassification of Cochlodinium geminatum as Polykrikos geminatum. PLoS One (2013) 0.87
A non-universal transcription factor? The Leishmania tarentolae TATA box-binding protein LtTBP associates with a subset of promoters. Int J Parasitol (2006) 0.87
The 3' termini of small RNAs in Trypanosoma brucei. FEMS Microbiol Lett (2004) 0.87
Retrieval of missing spliced leader in dinoflagellates. PLoS One (2009) 0.87
Intergenic and external transcribed spacers of ribosomal RNA genes in lizard-infecting Leishmania: molecular structure and phylogenetic relationship to mammal-infecting Leishmania in the subgenus Leishmania (Leishmania). Mem Inst Oswaldo Cruz (2002) 0.87
Tandem repeats, high copy number and remarkable diel expression rhythm of form II RuBisCO in Prorocentrum donghaiense (Dinophyceae). PLoS One (2013) 0.86
Analysis of Porphyra membrane transporters demonstrates gene transfer among photosynthetic eukaryotes and numerous sodium-coupled transport systems. Plant Physiol (2012) 0.86
Prevalent ciliate symbiosis on copepods: high genetic diversity and wide distribution detected using small subunit ribosomal RNA gene. PLoS One (2012) 0.85
Effect of inorganic and organic ligands on the bioavailability of methylmercury as determined by using a mer-lux bioreporter. Appl Environ Microbiol (2012) 0.85
Ectobiotic and endobiotic bacteria associated with Eutreptiella sp. isolated from Long Island Sound. Protist (2012) 0.85
Hitchhiking Trypanosoma cruzi minicircle DNA affects gene expression in human host cells via LINE-1 retrotransposon. Mem Inst Oswaldo Cruz (2006) 0.85
High sequence variability, diverse subcellular localizations, and ecological implications of alkaline phosphatase in dinoflagellates and other eukaryotic phytoplankton. Front Microbiol (2012) 0.84
3'-End polishing of the kinetoplastid spliced leader RNA is performed by SNIP, a 3'-->5' exonuclease with a Motley assortment of small RNA substrates. Mol Cell Biol (2004) 0.84
A population study of the minicircles in Trypanosoma cruzi: predicting guide RNAs in the absence of empirical RNA editing. BMC Genomics (2007) 0.84
Mitochondrial cob and cox1 genes and editing of the corresponding mRNAs in Dinophysis acuminata from Narragansett Bay, with special reference to the phylogenetic position of the genus Dinophysis. Appl Environ Microbiol (2007) 0.83
Transcriptomic study reveals widespread spliced leader trans-splicing, short 5'-UTRs and potential complex carbon fixation mechanisms in the euglenoid Alga Eutreptiella sp. PLoS One (2013) 0.83
Spliced leader RNAs, mitochondrial gene frameshifts and multi-protein phylogeny expand support for the genus Perkinsus as a unique group of alveolates. PLoS One (2011) 0.82
Evidence of complex involvement of serotonergic genes with restrictive and binge purge subtypes of anorexia nervosa. World J Biol Psychiatry (2010) 0.81
The internal transcribed spacer of ribosomal RNA genes in plant trypanosomes (Phytomonas spp.) resolves 10 groups. Infect Genet Evol (2011) 0.80
The Trypanosoma cruzi Sylvio X10 strain maxicircle sequence: the third musketeer. BMC Genomics (2011) 0.80
Trypanosoma congolense: paraoxonase 1 prolongs survival of infected mice. Exp Parasitol (2006) 0.78
Two distinct functional spliced leader RNA gene arrays in Leishmania tarentolae are found in several lizard Leishmania species. Int J Parasitol (2002) 0.78
The PsbO homolog from Symbiodinium kawagutii (Dinophyceae) characterized using biochemical and molecular methods. Photosynth Res (2013) 0.78