Published in RNA on April 24, 2009
A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites. Plant Cell (2009) 1.71
The rice pentatricopeptide repeat protein RF5 restores fertility in Hong-Lian cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162. Plant Cell (2012) 1.41
Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. Plant Physiol (2010) 1.32
RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing. Proc Natl Acad Sci U S A (2012) 1.32
Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana. J Biol Chem (2010) 1.20
LPA66 is required for editing psbF chloroplast transcripts in Arabidopsis. Plant Physiol (2009) 1.17
Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family. Proc Natl Acad Sci U S A (2011) 1.16
MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis. Plant Physiol (2009) 1.13
The pentatricopeptide repeat protein OTP87 is essential for RNA editing of nad7 and atp1 transcripts in Arabidopsis mitochondria. J Biol Chem (2011) 1.09
An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize. Proc Natl Acad Sci U S A (2013) 1.05
Comprehensive high-resolution analysis of the role of an Arabidopsis gene family in RNA editing. PLoS Genet (2013) 0.98
Natural variation in Arabidopsis leads to the identification of REME1, a pentatricopeptide repeat-DYW protein controlling the editing of mitochondrial transcripts. Plant Physiol (2010) 0.97
A pentatricopeptide repeat protein acts as a site-specificity factor at multiple RNA editing sites with unrelated cis-acting elements in plastids. Nucleic Acids Res (2012) 0.95
Pentatricopeptide repeat proteins involved in plant organellar RNA editing. RNA Biol (2013) 0.93
Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing. BMC Plant Biol (2013) 0.93
Pentatricopeptide-repeat family protein RF6 functions with hexokinase 6 to rescue rice cytoplasmic male sterility. Proc Natl Acad Sci U S A (2015) 0.92
Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria. J Mol Evol (2012) 0.91
Two related RNA-editing proteins target the same sites in mitochondria of Arabidopsis thaliana. J Biol Chem (2012) 0.90
Cytidine deaminase motifs within the DYW domain of two pentatricopeptide repeat-containing proteins are required for site-specific chloroplast RNA editing. J Biol Chem (2014) 0.90
Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains. J Biol Chem (2013) 0.89
Two RNA recognition motif-containing proteins are plant mitochondrial editing factors. Nucleic Acids Res (2015) 0.87
A conserved glutamate residue in the C-terminal deaminase domain of pentatricopeptide repeat proteins is required for RNA editing activity. J Biol Chem (2015) 0.85
Loss of matK RNA editing in seed plant chloroplasts. BMC Evol Biol (2009) 0.84
A zinc finger motif-containing protein is essential for chloroplast RNA editing. PLoS Genet (2015) 0.83
Molecular evolution of pentatricopeptide repeat genes reveals truncation in species lacking an editing target and structural domains under distinct selective pressures. BMC Evol Biol (2012) 0.83
RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering. Plant Physiol (2015) 0.82
Frequent chloroplast RNA editing in early-branching flowering plants: pilot studies on angiosperm-wide coexistence of editing sites and their nuclear specificity factors. BMC Evol Biol (2016) 0.82
Plastid signalling under multiple conditions is accompanied by a common defect in RNA editing in plastids. J Exp Bot (2011) 0.81
Seedling Lethal1, a pentatricopeptide repeat protein lacking an E/E+ or DYW domain in Arabidopsis, is involved in plastid gene expression and early chloroplast development. Plant Physiol (2013) 0.80
Sequence analysis of two alleles reveals that intra-and intergenic recombination played a role in the evolution of the radish fertility restorer (Rfo). BMC Plant Biol (2010) 0.79
The moss Physcomitrella patens, a model plant for the study of RNA editing in plant organelles. Plant Signal Behav (2010) 0.78
Organelle RNA recognition motif-containing (ORRM) proteins are plastid and mitochondrial editing factors in Arabidopsis. Plant Signal Behav (2016) 0.77
The DYW Subgroup PPR Protein MEF35 Targets RNA Editing Sites in the Mitochondrial rpl16, nad4 and cob mRNAs in Arabidopsis thaliana. PLoS One (2015) 0.77
RHON1 mediates a Rho-like activity for transcription termination in plastids of Arabidopsis thaliana. Plant Cell (2014) 0.77
RESOPS: a database for analyzing the correspondence of RNA editing sites to protein three-dimensional structures. Plant Cell Physiol (2009) 0.77
RNA Editing and Its Molecular Mechanism in Plant Organelles. Genes (Basel) (2016) 0.76
Quantitative trait locus mapping identifies REME2, a PPR-DYW protein required for editing of specific C targets in Arabidopsis mitochondria. RNA Biol (2013) 0.76
An Organelle RNA Recognition Motif Protein Is Required for Photosystem II Subunit psbF Transcript Editing. Plant Physiol (2017) 0.75
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A nucleus-encoded factor, CRR2, is essential for the expression of chloroplast ndhB in Arabidopsis. Plant J (2003) 2.24
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RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon. EMBO J (1992) 2.13
Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein. Plant Cell (2008) 2.09
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RNA editing in plant organelles: machinery, physiological function and evolution. Cell Mol Life Sci (2006) 1.96
CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts. Plant J (2008) 1.93
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A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons. Nucleic Acids Res (2007) 1.62
Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements. Mol Cell Biol (2002) 1.61
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The tobacco plastid accD gene is essential and is required for leaf development. Plant J (2005) 1.59
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Multifunctional acetyl-CoA carboxylase 1 is essential for very long chain fatty acid elongation and embryo development in Arabidopsis. Plant J (2003) 1.43
Sense from nonsense: how the genetic information of chloroplasts is altered by RNA editing. Biochimie (2000) 1.41
The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth. Plant J (2008) 1.40
A single alteration 20 nt 5' to an editing target inhibits chloroplast RNA editing in vivo. Nucleic Acids Res (2001) 1.36
Transcript abundance supercedes editing efficiency as a factor in developmental variation of chloroplast gene expression. RNA (2002) 1.35
A termination codon is created by RNA editing in the petunia atp9 transcript. Curr Genet (1991) 1.35
Multi-functional acetyl-CoA carboxylase from Brassica napus is encoded by a multi-gene family: indication for plastidic localization of at least one isoform. Proc Natl Acad Sci U S A (1997) 1.33
Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. J Mol Evol (2006) 1.32
Genetic architecture of mitochondrial editing in Arabidopsis thaliana. Genetics (2007) 1.30
The structure of the carboxyltransferase component of acetyl-coA carboxylase reveals a zinc-binding motif unique to the bacterial enzyme. Biochemistry (2006) 1.29
The evolution of chloroplast RNA editing. Mol Biol Evol (2006) 1.24
Conservation of RNA editing between rice and maize plastids: are most editing events dispensable? Mol Gen Genet (2000) 1.17
Chloroplast RNA editing required for functional acetyl-CoA carboxylase in plants. J Biol Chem (2000) 1.15
Seven large variations in the extent of RNA editing in plant mitochondria between three ecotypes of Arabidopsis thaliana. Mitochondrion (2008) 1.12
Substrate and cofactor requirements for RNA editing of chloroplast transcripts in Arabidopsis in vitro. Plant J (2005) 1.12
A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity. FEBS Lett (2008) 1.09
RNA editing sites in plant mitochondria can share cis-elements. FEBS Lett (2005) 1.04
Identification of a sequence motif critical for editing of a tobacco chloroplast transcript. RNA (2006) 1.03
PPR336 is associated with polysomes in plant mitochondria. J Mol Biol (2007) 1.02
Ecotype allelic variation in C-to-U editing extent of a mitochondrial transcript identifies RNA-editing quantitative trait loci in Arabidopsis. Plant Physiol (2005) 0.99
POGs/PlantRBP: a resource for comparative genomics in plants. Nucleic Acids Res (2006) 0.97
Cross-competition in editing of chloroplast RNA transcripts in vitro implicates sharing of trans-factors between different C targets. J Biol Chem (2008) 0.95
An accurate fluorescent assay for quantifying the extent of RNA editing. RNA (2006) 0.93
Recombinant carboxyltransferase responsive to redox of pea plastidic acetyl-CoA carboxylase. J Biol Chem (2000) 0.92
Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles. BMC Plant Biol (2008) 0.89
High conservation of a 5' element required for RNA editing of a C target in chloroplast psbE transcripts. J Mol Evol (2008) 0.84
Assay of editing of exogenous RNAs in chloroplast extracts of Arabidopsis, maize, pea, and tobacco. Methods Enzymol (2007) 0.82
A pentatricopeptide repeat-containing gene restores fertility to cytoplasmic male-sterile plants. Proc Natl Acad Sci U S A (2002) 2.52
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Mobilization of rubisco and stroma-localized fluorescent proteins of chloroplasts to the vacuole by an ATG gene-dependent autophagic process. Plant Physiol (2008) 1.91
Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements. Mol Cell Biol (2002) 1.61
Genetics and genomics of chloroplast biogenesis: maize as a model system. Trends Plant Sci (2004) 1.39
Association of six YFP-myosin XI-tail fusions with mobile plant cell organelles. BMC Plant Biol (2007) 1.37
Transcript abundance supercedes editing efficiency as a factor in developmental variation of chloroplast gene expression. RNA (2002) 1.35
Microfilaments and microtubules control the morphology and movement of non-green plastids and stromules in Nicotiana tabacum. Plant J (2003) 1.33
RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing. Proc Natl Acad Sci U S A (2012) 1.32
Genetic architecture of mitochondrial editing in Arabidopsis thaliana. Genetics (2007) 1.30
In vivo analysis of interactions between GFP-labeled microfilaments and plastid stromules. BMC Plant Biol (2004) 1.26
Plastids and stromules interact with the nucleus and cell membrane in vascular plants. Plant Cell Rep (2004) 1.25
The Arabidopsis AtRaptor genes are essential for post-embryonic plant growth. BMC Biol (2005) 1.24
The petunia restorer of fertility protein is part of a large mitochondrial complex that interacts with transcripts of the CMS-associated locus. Plant J (2006) 1.18
GFP-labelled Rubisco and aspartate aminotransferase are present in plastid stromules and traffic between plastids. J Exp Bot (2004) 1.15
Substrate and cofactor requirements for RNA editing of chloroplast transcripts in Arabidopsis in vitro. Plant J (2005) 1.12
β-Carboxysomal proteins assemble into highly organized structures in Nicotiana chloroplasts. Plant J (2014) 1.11
Developmental co-variation of RNA editing extent of plastid editing sites exhibiting similar cis-elements. Nucleic Acids Res (2003) 1.11
A myosin XI tail domain homologous to the yeast myosin vacuole-binding domain interacts with plastids and stromules in Nicotiana benthamiana. Mol Plant (2009) 1.08
An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize. Proc Natl Acad Sci U S A (2013) 1.05
Effects of arc3, arc5 and arc6 mutations on plastid morphology and stromule formation in green and nongreen tissues of Arabidopsis thaliana. Photochem Photobiol (2008) 1.03
Identification of a sequence motif critical for editing of a tobacco chloroplast transcript. RNA (2006) 1.03
Ecotype allelic variation in C-to-U editing extent of a mitochondrial transcript identifies RNA-editing quantitative trait loci in Arabidopsis. Plant Physiol (2005) 0.99
Comprehensive high-resolution analysis of the role of an Arabidopsis gene family in RNA editing. PLoS Genet (2013) 0.98
Expression of complementary RNA from chloroplast transgenes affects editing efficiency of transgene and endogenous chloroplast transcripts. Nucleic Acids Res (2005) 0.96
Sequence elements critical for efficient RNA editing of a tobacco chloroplast transcript in vivo and in vitro. Nucleic Acids Res (2006) 0.95
Cross-competition in editing of chloroplast RNA transcripts in vitro implicates sharing of trans-factors between different C targets. J Biol Chem (2008) 0.95
Expression of thermostable microbial cellulases in the chloroplasts of nicotine-free tobacco. J Biotechnol (2007) 0.94
An efficient downstream box fusion allows high-level accumulation of active bacterial beta-glucosidase in tobacco chloroplasts. Plant Mol Biol (2011) 0.94
Upregulation of a tonoplast-localized cytochrome P450 during petal senescence in Petunia inflata. BMC Plant Biol (2006) 0.90
The Arabidopsis Mei2 homologue AML1 binds AtRaptor1B, the plant homologue of a major regulator of eukaryotic cell growth. BMC Plant Biol (2005) 0.90
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Extensive homologous recombination between introduced and native regulatory plastid DNA elements in transplastomic plants. Transgenic Res (2009) 0.87
High conservation of a 5' element required for RNA editing of a C target in chloroplast psbE transcripts. J Mol Evol (2008) 0.84
High-level bacterial cellulase accumulation in chloroplast-transformed tobacco mediated by downstream box fusions. Biotechnol Bioeng (2009) 0.83
Sensitivity of PCR assays for murine gammaretroviruses and mouse contamination in human blood samples. PLoS One (2012) 0.82
Assay of editing of exogenous RNAs in chloroplast extracts of Arabidopsis, maize, pea, and tobacco. Methods Enzymol (2007) 0.82
Arabidopsis myosin XI sub-domains homologous to the yeast myo2p organelle inheritance sub-domain target subcellular structures in plant cells. Front Plant Sci (2013) 0.81
Analysis of Organelle Targeting by DIL Domains of the Arabidopsis Myosin XI Family. Front Plant Sci (2011) 0.81
RNA editing in ribosome-less plastids of iojap maize. Curr Genet (2004) 0.81
Bacteriophage 5' untranslated regions for control of plastid transgene expression. Planta (2012) 0.75