Published in Front Biosci (Landmark Ed) on June 01, 2009
Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing. Virology (2012) 1.75
A Comprehensive Analysis of Replicating Merkel Cell Polyomavirus Genomes Delineates the Viral Transcription Program and Suggests a Role for mcv-miR-M1 in Episomal Persistence. PLoS Pathog (2015) 0.92
RNA editing, epitranscriptomics, and processing in cancer progression. Cancer Biol Ther (2015) 0.83
The "initiator" as a transcription control element. Cell (1989) 11.13
RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem (2001) 9.66
Two distinct enhancers with different cell specificities coexist in the regulatory region of polyoma. Cell (1984) 9.47
A small segment of polyoma virus DNA enhances the expression of a cloned beta-globin gene over a distance of 1400 base pairs. Nucleic Acids Res (1981) 7.57
A region of the polyoma virus genome between the replication origin and late protein coding sequences is required in cis for both early gene expression and viral DNA replication. Nucleic Acids Res (1981) 6.11
The fate of dsRNA in the nucleus: a p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Cell (2001) 4.72
Polyomavirus enhancer contains multiple redundant sequence elements that activate both DNA replication and gene expression. Mol Cell Biol (1985) 3.91
Role of polyadenylation in nucleocytoplasmic transport of mRNA. Mol Cell Biol (1996) 3.26
Virus-specific RNA in cells productively infected or transformed by polyoma virus. Cold Spring Harb Symp Quant Biol (1975) 3.06
Non-contiguous segments of the polyoma genome required in cis for DNA replication. J Mol Biol (1982) 3.03
Transcription of the polyoma virus genome: synthesis and cleavage of giant late polyoma-specific RNA. Proc Natl Acad Sci U S A (1971) 2.77
The high affinity binding site on polyoma virus DNA for the viral large-T protein. Nucleic Acids Res (1981) 2.67
Transcription during productive infection with polyoma virus and Simian virus 40. Cell (1976) 2.48
An alternative pathway for gene regulation by Myc. EMBO J (1997) 2.43
Nuclear antisense RNA induces extensive adenosine modifications and nuclear retention of target transcripts. Proc Natl Acad Sci U S A (1997) 2.33
Sequences at the capped 5'-ends of polyoma virus late region mRNAs: an example of extreme terminal heterogeneity. Nucleic Acids Res (1981) 2.32
Virus-specific early RNA in 3T6 cells infected by a tsA mutant of polyoma virus. Virology (1978) 2.31
A constitutive promoter directs expression of the nerve growth factor receptor gene. Mol Cell Biol (1988) 2.26
Multiple binding sites for polyomavirus large T antigen within regulatory sequences of polyomavirus DNA. J Virol (1984) 2.25
Multiple 5' terminal cap structures in late polyoma virus RNA. Cell (1979) 2.21
Characterisation of polyoma late mRNA leader sequences by molecular cloning and DNA sequence analysis. Nucleic Acids Res (1980) 1.99
Comparison of polyoma virus transcription in productively infected mouse cells and transformed rodent cell lines. Cold Spring Harb Symp Quant Biol (1980) 1.98
Amplification of a specific region of the polyoma virus genome. Nature (1975) 1.92
Analysis of polyoma virus nuclear RNA by mini-blot hybridization. Proc Natl Acad Sci U S A (1977) 1.86
5' termini of polyoma virus early region transcripts synthesized in vivo by wild-type virus and viable deletion mutants. J Mol Biol (1982) 1.82
Polyoma virus giant RNAs contain tandem repeats of the nucleotide sequence of the entire viral genome. Proc Natl Acad Sci U S A (1978) 1.67
Location of the origin and terminus of replication in polyoma virus DNA. J Gen Virol (1974) 1.66
Localization of three major cappe 5' ends of polyoma virus late mRNA's within a single tetranucleotide sequence in the viral genome. J Virol (1980) 1.66
Sequences in the polyomavirus DNA regulatory region involved in viral DNA replication and early gene expression. J Virol (1985) 1.60
Topography of the three late mRNA's of polyoma virus which encode the virion proteins. J Virol (1980) 1.59
Polyomavirus large T antigen binds independently to multiple, unique regions on the viral genome. J Virol (1983) 1.55
Structure of polyoma virus late nuclear RNA. J Mol Biol (1981) 1.54
A polyoma mutant that encodes small T antigen but not middle T antigen demonstrates uncoupling of cell surface and cytoskeletal changes associated with cell transformation. Mol Cell Biol (1984) 1.52
Location of sequences in polyomavirus DNA that are required for early gene expression in vivo and in vitro. Mol Cell Biol (1984) 1.49
DNA binding activity of polyoma virus large tumor antigen. Proc Natl Acad Sci U S A (1984) 1.47
Cloning of terminal transferase cDNA by antibody screening. Proc Natl Acad Sci U S A (1984) 1.45
Strand-specific transcription of polyoma virus DNA-early in productive infection and in transformed cells. J Virol (1975) 1.43
Deletion analysis of the polyomavirus late promoter: evidence for both positive and negative elements in the absence of early proteins. J Virol (1989) 1.38
Regulation of polyomavirus transcription by large tumor antigen. Proc Natl Acad Sci U S A (1984) 1.38
Adenovirus E1a proteins repress expression from polyomavirus early and late promoters. Mol Cell Biol (1986) 1.36
Multiple subelements within the polyomavirus enhancer function synergistically to activate DNA replication. Mol Cell Biol (1988) 1.33
Kinetics and efficiency of polyadenylation of late polyomavirus nuclear RNA: generation of oligomeric polyadenylated RNAs and their processing into mRNA. Mol Cell Biol (1984) 1.32
Regulation of polyomavirus late promoter activity by viral early proteins. J Virol (1986) 1.26
Polyoma virus early and late mRNAs in productively infected mouse 3T6 cells. J Virol (1982) 1.22
The length but not the sequence of the polyoma virus late leader exon is important for both late RNA splicing and stability. Nucleic Acids Res (1987) 1.21
Polyomavirus early-late switch is not regulated at the level of transcription initiation and is associated with changes in RNA processing. Proc Natl Acad Sci U S A (1988) 1.21
Polyomavirus late leader region serves an essential spacer function necessary for viability and late gene expression. J Virol (1986) 1.18
Transcription from the polyoma late promoter in cells stably transformed by chimeric plasmids. Mol Cell Biol (1985) 1.16
The polyomavirus enhancer comprises multiple functional elements. J Virol (1988) 1.14
Replication-dependent transactivation of the polyomavirus late promoter. J Virol (1990) 1.10
Splice site choice in a complex transcription unit containing multiple inefficient polyadenylation signals. Mol Cell Biol (1991) 1.10
Polyomavirus late pre-mRNA processing: DNA replication-associated changes in leader exon multiplicity suggest a role for leader-to-leader splicing in the early-late switch. J Virol (1990) 1.10
Targeted nuclear antisense RNA mimics natural antisense-induced degradation of polyoma virus early RNA. Proc Natl Acad Sci U S A (1994) 1.10
Leader-to-leader splicing is required for efficient production and accumulation of polyomavirus late mRNAs. J Virol (1989) 1.09
Expression of a 91-kilodalton PEA3-binding protein is down-regulated during differentiation of F9 embryonal carcinoma cells. Mol Cell Biol (1992) 1.08
Multiple domains in the polyomavirus B enhancer are required for productive infection of F9 embryonal carcinoma cells. J Virol (1988) 1.02
Polyoma virus transcription early during productive infection of mouse 3T6 cells. J Mol Biol (1979) 1.02
Polyoma virus small tumor antigen pre-mRNA splicing requires cooperation between two 3' splice sites. Proc Natl Acad Sci U S A (1990) 1.01
Viral gene expression in polyoma virus-transformed rat cells and their cured revertants. J Virol (1981) 1.00
A suboptimal 5' splice site is a cis-acting determinant of nuclear export of polyomavirus late mRNAs. Mol Cell Biol (1996) 1.00
Control elements situated downstream of the major transcriptional start site are sufficient for highly efficient polyomavirus late transcription. J Virol (1989) 0.99
Polyoma virus early-late switch: regulation of late RNA accumulation by DNA replication. Proc Natl Acad Sci U S A (1993) 0.98
New class of polyomavirus mutant that can persist as free copies in F9 embryonal carcinoma cells. Mol Cell Biol (1986) 0.93
Splice site skipping in polyomavirus late pre-mRNA processing. J Virol (1991) 0.87
Unique requirement for the PyF441 mutation for polyomavirus infection of F9 embryonal carcinoma cells. J Virol (1988) 0.86
Biological activities of oligonucleotides spanning the F9 point mutation within the enhancer region of polyomavirus DNA. J Virol (1988) 0.85
Splice site selection in polyomavirus late pre-mRNA processing. J Virol (1994) 0.83
How a small DNA virus uses dsRNA but not RNAi to regulate its life cycle. Cold Spring Harb Symp Quant Biol (2006) 0.81
Analysis of transcription factors binding to the duplicated PEA1 and PEA3 sites that are required for polyomavirus mutant expression in PCC4 embryonic carcinoma cells. J Virol (1993) 0.76
Translational efficiencies of polyomavirus late mRNA molecules that differ in the sequences of their 5' noncoding late leader exons. J Virol (1989) 0.76
Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. Mol Cell (2009) 4.54
Alu element-mediated gene silencing. EMBO J (2008) 3.22
Genomewide characterization of non-polyadenylated RNAs. Genome Biol (2011) 2.92
Long noncoding RNAs with snoRNA ends. Mol Cell (2012) 2.71
Genome-wide analysis of coordinate expression and evolution of human cis-encoded sense-antisense transcripts. Trends Genet (2005) 2.04
Genome-wide studies reveal that Lin28 enhances the translation of genes important for growth and survival of human embryonic stem cells. Stem Cells (2011) 1.90
Molecular basis for an attenuated cytoplasmic dsRNA response in human embryonic stem cells. Cell Cycle (2010) 1.71
Effects of length and location on the cellular response to double-stranded RNA. Microbiol Mol Biol Rev (2004) 1.57
Decoding the function of nuclear long non-coding RNAs. Curr Opin Cell Biol (2010) 1.54
Gene regulation by SINES and inosines: biological consequences of A-to-I editing of Alu element inverted repeats. Cell Cycle (2008) 1.42
Evidence for a preferential targeting of 3'-UTRs by cis-encoded natural antisense transcripts. Nucleic Acids Res (2005) 1.37
Evidence for variation in abundance of antisense transcripts between multicellular animals but no relationship between antisense transcriptionand organismic complexity. Genome Res (2006) 1.35
Human antisense genes have unusually short introns: evidence for selection for rapid transcription. Trends Genet (2005) 1.35
Vigilins bind to promiscuously A-to-I-edited RNAs and are involved in the formation of heterochromatin. Curr Biol (2005) 1.34
Antisense starts making more sense. Nat Biotechnol (2003) 1.34
Medicine: silencing viruses with RNA. Nature (2002) 1.27
Long noncoding RNAs in mammalian cells: what, where, and why? Wiley Interdiscip Rev RNA (2010) 1.19
Retention and repression: fates of hyperedited RNAs in the nucleus. Curr Opin Cell Biol (2005) 1.07
SINEs point to abundant editing in the human genome. Genome Biol (2005) 0.97
ADAR editing wobbles the microRNA world. ACS Chem Biol (2007) 0.89
Gene regulation by sense-antisense overlap of polyadenylation signals. RNA (2009) 0.85
Innate immunity in pluripotent human cells: attenuated response to interferon-β. J Biol Chem (2013) 0.84
Nuclear Editing of mRNA 3'-UTRs. Curr Top Microbiol Immunol (2012) 0.80
On the mechanism of induction of heterochromatin by the RNA-binding protein vigilin. RNA (2008) 0.80
Methods for the analysis of adenosine-to-inosine editing in RNA. Methods Mol Biol (2004) 0.79
Unleash the messenger. Nat Cell Biol (2005) 0.75