Published in Fungal Genet Biol on July 21, 2009
The hierarchy of the 3D genome. Mol Cell (2013) 3.54
Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation. Nucleic Acids Res (2010) 2.96
Genomics tools for unraveling chromosome architecture. Nat Biotechnol (2010) 2.63
The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA. Genes Dev (2011) 2.53
Complex multi-enhancer contacts captured by genome architecture mapping. Nature (2017) 2.04
Physical tethering and volume exclusion determine higher-order genome organization in budding yeast. Genome Res (2012) 1.95
Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling. BMC Bioinformatics (2011) 1.78
Principles of chromosomal organization: lessons from yeast. J Cell Biol (2011) 1.47
Transcription factors mediate condensin recruitment and global chromosomal organization in fission yeast. Nat Genet (2016) 1.44
The budding yeast nucleus. Cold Spring Harb Perspect Biol (2010) 1.43
Normalization of a chromosomal contact map. BMC Genomics (2012) 1.41
Structure and function in the budding yeast nucleus. Genetics (2012) 1.37
Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition. Nature (2017) 1.12
Gene positioning. Cold Spring Harb Perspect Biol (2010) 1.12
An Overview of Genome Organization and How We Got There: from FISH to Hi-C. Microbiol Mol Biol Rev (2015) 1.10
Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription. Nucleic Acids Res (2013) 1.09
High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome. Genome Res (2013) 1.08
The 3D organization of the yeast genome correlates with co-expression and reflects functional relations between genes. PLoS One (2013) 1.04
Genome architecture and the role of transcription. Curr Opin Cell Biol (2010) 1.04
Genome-wide mapping and analysis of chromosome architecture. Nat Rev Mol Cell Biol (2016) 1.02
Recovering ensembles of chromatin conformations from contact probabilities. Nucleic Acids Res (2012) 1.02
A complex network framework for unbiased statistical analyses of DNA-DNA contact maps. Nucleic Acids Res (2012) 0.95
Unravelling global genome organization by 3C-seq. Semin Cell Dev Biol (2011) 0.92
Chromosome conformation maps in fission yeast reveal cell cycle dependent sub nuclear structure. Nucleic Acids Res (2014) 0.91
From cells to chromatin: capturing snapshots of genome organization with 5C technology. Methods (2012) 0.89
The statistical-mechanics of chromosome conformation capture. Nucleus (2013) 0.88
Effect of chromosome tethering on nuclear organization in yeast. PLoS One (2014) 0.88
Mitochondrial-nuclear DNA interactions contribute to the regulation of nuclear transcript levels as part of the inter-organelle communication system. PLoS One (2012) 0.88
Genome-wide profiling of chromosome interactions in Plasmodium falciparum characterizes nuclear architecture and reconfigurations associated with antigenic variation. Mol Microbiol (2013) 0.86
How to build a yeast nucleus. Nucleus (2013) 0.86
Inactivation of the budding yeast cohesin loader Scc2 alters gene expression both globally and in response to a single DNA double strand break. Cell Cycle (2014) 0.86
tRNA gene identity affects nuclear positioning. PLoS One (2011) 0.82
Chromosome conformation by crosslinking: polymer physics matters. Nucleus (2011) 0.82
3D genome organization in health and disease: emerging opportunities in cancer translational medicine. Nucleus (2015) 0.81
Differential chromosome conformations as hallmarks of cellular identity revealed by mathematical polymer modeling. PLoS Comput Biol (2015) 0.81
Transcriptional regulatory network shapes the genome structure of Saccharomyces cerevisiae. Nucleus (2013) 0.81
Meet the neighbours: tools to dissect nuclear structure and function. Brief Funct Genomics (2011) 0.81
Manifold Based Optimization for Single-Cell 3D Genome Reconstruction. PLoS Comput Biol (2015) 0.81
Hierarchies in eukaryotic genome organization: Insights from polymer theory and simulations. BMC Biophys (2011) 0.80
Co-segregation of yeast plasmid sisters under monopolin-directed mitosis suggests association of plasmid sisters with sister chromatids. Nucleic Acids Res (2013) 0.79
Connecting SNPs in Diabetes: A Spatial Analysis of Meta-GWAS Loci. Front Endocrinol (Lausanne) (2015) 0.78
Potential roles for interactions between the mitochondrial and nuclear DNA throughout the cell cycle of Schizosaccharomyces pombe. Mitochondrion (2014) 0.78
The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure? Biomol Concepts (2013) 0.78
Quantified effects of chromosome-nuclear envelope attachments on 3D organization of chromosomes. Nucleus (2015) 0.77
A diffusion model for the coordination of DNA replication in Schizosaccharomyces pombe. Sci Rep (2016) 0.77
Chromosome-refolding model of mating-type switching in yeast. Proc Natl Acad Sci U S A (2016) 0.76
Sumoylation and transcription regulation at nuclear pores. Chromosoma (2014) 0.76
Spatial Genome Organization and Its Emerging Role as a Potential Diagnosis Tool. Front Genet (2016) 0.75
Quantification of DNA cleavage specificity in Hi-C experiments. Nucleic Acids Res (2015) 0.75
A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability. Mol Cell Biol (2014) 0.75
Data for chromosome contacts and matched transcription profiles at three cell cycle phases in the fission yeast. Genom Data (2015) 0.75
Insights from space: potential role of diet in the spatial organization of chromosomes. Nutrients (2014) 0.75
Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro. Skelet Muscle (2017) 0.75
The 4D nucleome project. Nature (2017) 0.75
A potential role for genome structure in the translation of mechanical force during immune cell development. Nucleus (2016) 0.75
Alpha emitter radium-223 and survival in metastatic prostate cancer. N Engl J Med (2013) 13.90
Ikaros DNA-binding proteins direct formation of chromatin remodeling complexes in lymphocytes. Immunity (1999) 5.50
Treatment of Wilms' tumor. Results of the Third National Wilms' Tumor Study. Cancer (1989) 4.34
Calorie restriction induces mitochondrial biogenesis and bioenergetic efficiency. Proc Natl Acad Sci U S A (2006) 3.97
Specificity and function of T cells bearing gamma delta receptors. Immunol Today (1988) 3.93
T-cell responses to Mls and to bacterial proteins that mimic its behavior. Immunol Rev (1989) 3.80
Predictions of hospital mortality rates: a comparison of data sources. Ann Intern Med (1997) 3.72
Guidelines for controlled trials of drugs in migraine: second edition. Cephalalgia (2000) 3.32
Familial advanced sleep-phase syndrome: A short-period circadian rhythm variant in humans. Nat Med (1999) 3.27
Intrasphincteric botulinum toxin for the treatment of achalasia. N Engl J Med (1995) 3.00
A Canadian multicenter placebo-controlled study of fixed doses of risperidone and haloperidol in the treatment of chronic schizophrenic patients. J Clin Psychopharmacol (1993) 2.92
Cooperative interaction of B lymphocytes with antigen-specific helper T lymphocytes is MHC restricted. Nature (1981) 2.85
Frequency, severity and duration of immune reconstitution events in HIV-related tuberculosis. Int J Tuberc Lung Dis (2007) 2.68
Limbic lesions and the problem of stimulus--reinforcement associations. Exp Neurol (1972) 2.65
Helping health professionals involved in cancer care acquire key interviewing skills--the impact of workshops. Eur J Cancer (1996) 2.62
Identical mutations in the FGFR2 gene cause both Pfeiffer and Crouzon syndrome phenotypes. Nat Genet (1995) 2.49
Distribution and aetiology of blindness and visual impairment in mesoendemic onchocercal communities, Kaduna State, Nigeria. Kaduna Collaboration for Research on Onchocerciasis. Br J Ophthalmol (1994) 2.47
Heat-stable antigen is a costimulatory molecule for CD4 T cell growth. J Exp Med (1992) 2.42
Olfactory deficits in schizophrenia. Biol Psychiatry (1988) 2.38
Randomised controlled trial of tailored strategies to implement guidelines for the management of patients with depression in general practice. Br J Gen Pract (2001) 2.38
Human immunodeficiency virus infection among Peace Corps volunteers in Zaire. No evidence for unusual modes of transmission. Arch Intern Med (1991) 2.25
Ikaros sets thresholds for T cell activation and regulates chromosome propagation. Immunity (1999) 2.19
Vagal reflexes referred from the upper aerodigestive tract: an infrequently recognized cause of common cardiorespiratory responses. Ann Intern Med (1992) 2.14
A bookshelf in public health, medical care, and allied fields. Bull Med Libr Assoc (1972) 2.14
Recurrent urinary infections in girls: relation to enuresis. Can Med Assoc J (1972) 2.09
CD4+ T cells: specificity and function. Immunol Rev (1988) 2.04
Functional activities of antibodies against brain-associated T cell antigens. II. Stimulation of T cell-induced B cell proliferation. Eur J Immunol (1982) 1.91
Gold nanoparticles as novel agents for cancer therapy. Br J Radiol (2011) 1.90
Neuropsychological characteristics of mild cognitive impairment subgroups. J Neurol Neurosurg Psychiatry (2005) 1.83
Replantation. Br Med J (Clin Res Ed) (1983) 1.81
CT evaluation of amyloidosis: spectrum of disease. Radiographics (1993) 1.77
Generalized immune activation in pulmonary tuberculosis: co-activation with HIV infection. Clin Exp Immunol (1996) 1.76
Prevalence of aspiration and laryngeal penetration in patients with unilateral vocal fold motion impairment. Dysphagia (2000) 1.75
A comparison of individual and population smoking data from a postal survey and general practice records. Br J Gen Pract (2000) 1.73
Co-stimulation of murine CD4 T cell growth: cooperation between B7 and heat-stable antigen. Eur J Immunol (1992) 1.72
Using clinical variables to estimate the risk of patient mortality. Med Care (1991) 1.65
Choosing among generalized linear models applied to medical data. Stat Med (1998) 1.64
Quantitative trait locus effects and environmental interaction in a sample of North American barley germ plasm. Theor Appl Genet (1993) 1.58
The assessment of RBE effects using the concept of biologically effective dose. Int J Radiat Oncol Biol Phys (1999) 1.58
Purulent pericarditis: rediscovery of an old remedy. J Thorac Cardiovasc Surg (1996) 1.56
Prevalence of obesity in dogs examined by Australian veterinary practices and the risk factors involved. Vet Rec (2005) 1.56
Brain atrophy and intellectual impairment in heavy drinkers--a clinical, psychometric and computerized tomography study. Aust N Z J Med (1978) 1.54
ENLIGHT and other EU-funded projects in hadron therapy. Br J Radiol (2010) 1.54
Low vision services for vision rehabilitation in the United Kingdom. Br J Ophthalmol (2002) 1.47
Future directions for unsealed source radionuclide therapy for bone metastases. Eur J Nucl Med Mol Imaging (2002) 1.45
Mandatory reporting of occupational health problems. A new surveillance program in North Carolina. N C Med J (1994) 1.40
Developing a national plan for schizophrenia research. Can J Psychiatry (1990) 1.40
Membranous nephropathy associated with sarcoidosis. Response to prednisolone. Nephron (1989) 1.40
Radiobiologically based assessments of the net costs of fractionated radiotherapy. Int J Radiat Oncol Biol Phys (1996) 1.40
Localization of CD4+ T cell epitope hotspots to exposed strands of HIV envelope glycoprotein suggests structural influences on antigen processing. Proc Natl Acad Sci U S A (2001) 1.39
Echocardiographic evidence of concentric left ventricular enlargement in female weight lifters. Eur J Appl Physiol Occup Physiol (1998) 1.39
Cancer in children of parents exposed to hydrocarbon-related industries and occupations. Am J Epidemiol (1980) 1.38
Maladaptive coping and affective disorders among cancer patients. Psychol Med (1996) 1.35
Alterations in the PITSLRE protein kinase gene complex on chromosome 1p36 in childhood neuroblastoma. Nat Genet (1994) 1.33
Treatment of achalasia with intrasphincteric injection of botulinum toxin. A pilot trial. Ann Intern Med (1994) 1.31
A modelled comparison of the effects of using different ways to compensate for missed treatment days in radiotherapy. Clin Oncol (R Coll Radiol) (1996) 1.31
The epidemiology of surgically repaired aneurysms in the United States. J Vasc Surg (1999) 1.28
The clinical radiobiology of brachytherapy. Br J Radiol (1998) 1.26
Assessing the daily consistency of bladder filling using an ultrasonic Bladderscan device in men receiving radical conformal radiotherapy for prostate cancer. Br J Radiol (2010) 1.24
Functional activities of antibodies against brain-associated T cell antigens. I. Induction of T cell proliferation. Eur J Immunol (1981) 1.24
A study of white finger in the gas industry. Br J Ind Med (1985) 1.22
Unnecessary repeat requesting of tests: an audit in a government hospital immunology laboratory. J Clin Pathol (2005) 1.22
Tissue doses in the upper gastrointestinal fluoroscopy examination. Radiology (1991) 1.21
CT in the diagnosis of enterovesical fistulae. AJR Am J Roentgenol (1985) 1.19
When typical is atypical: mycobacterial infection mimicking cutaneous vasculitis. Rheumatology (Oxford) (2002) 1.18
The role of B cell surface Ia antigen recognition by T cells in B cell triggering. Analysis of the interaction of cloned helper T cells with normal B cells in differing states of activation and with B cells expressing the xid defect. Eur J Immunol (1984) 1.18
Non-operative arterial embolisation in primary liver tumours. Br Med J (1979) 1.18
Evidence that the Thy-1 molecule is the target for T cell mitogenic antibody against brain-associated antigens. Eur J Immunol (1983) 1.16
Wilm's tumor: an update. Cancer (1980) 1.16
Timing of prenatal androgen exposure: anatomical and endocrine effects on juvenile male and female rhesus monkeys. Horm Behav (2000) 1.16
Current management of small-bowel obstruction. Adv Surg (1997) 1.15
CT evaluation of Crohn's disease: effect on patient management. AJR Am J Roentgenol (1987) 1.15
Small-bowel diverticulitis: CT findings. AJR Am J Roentgenol (1986) 1.14
Subpopulations of B cells distinguished by cell surface expression of Ia antigens. Correlation of Ia and idiotype during activation by cloned Ia-restricted T cells. J Exp Med (1983) 1.13
Different phenotypic variants of the mouse B cell tumor A20/2J are selected by antigen- and mitogen-triggered cytotoxicity of L3T4-positive, I-A-restricted T cell clones. J Immunol (1986) 1.13
Joint symposium 2009 on carbon ion radiotherapy. Br J Radiol (2009) 1.13
Geometrical analysis of radiotherapy target volume delineation: a systematic review of reported comparison methods. Clin Oncol (R Coll Radiol) (2010) 1.12
Quantitative EEG in schizophrenia and in response to acute and chronic clozapine treatment. Schizophr Res (2001) 1.12
Creatine kinase and glutamic oxalacetic transaminase activity in serum: kinetics of change with exercise and effect of physical conditioning. J Lab Clin Med (1968) 1.12
Chromosome positioning and the clustering of functionally related loci in yeast is driven by chromosomal interactions. Nucleus (2012) 1.11
Characterization of a bovine thymic differentiation antigen analogous to CD1 in the human. Scand J Immunol (1988) 1.11
Frontonasal dysostosis in two successive generations. Am J Med Genet (1999) 1.09
Factors influencing the age of menarche in a lower socio-economic group in Melbourne. Med J Aust (1972) 1.09
Coeliac disease and lung disease. Lancet (1971) 1.09
Why more needs to be known about RBE effects in modern radiotherapy. Appl Radiat Isot (2008) 1.09
ER5, a tomato cDNA encoding an ethylene-responsive LEA-like protein: characterization and expression in response to drought, ABA and wounding. Plant Mol Biol (1997) 1.09
Torsion of lipoma of appendix epiploica: CT evaluation. J Comput Assist Tomogr (1985) 1.09
Glucagon and beta-blocker toxicity. Br Med J (1976) 1.08
Effect of remifentanil on pain and secondary hyperalgesia associated with the heat--capsaicin sensitization model in healthy volunteers. Anesthesiology (2001) 1.08
Bladder involvement in Crohn disease: role of CT in detection and evaluation. J Comput Assist Tomogr (1989) 1.07
William Clift: the surgeon's apprentice. Ann R Coll Surg Engl (1978) 1.07
William Home Clift: the first assistant Conservator of the Hunterian Museum. Ann R Coll Surg Engl (1980) 1.07
Factitious psychosis: phenomenology, family history, and long-term outcome of nine patients. Am J Psychiatry (1982) 1.07
Antibiotic-related acute kidney injury in patients undergoing elective joint replacement. Bone Joint J (2014) 1.07
The first episode of psychosis: the experience of relatives. Acta Psychiatr Scand (2003) 1.06
Variations in dietary iron alter behavior in developing rats. J Nutr (2001) 1.06
Crohn disease: perirectal and perianal findings at CT. Radiology (1988) 1.06
A zebrafish retinoic acid receptor expressed in the regenerating caudal fin. Development (1994) 1.05
A controlled dose-ranging study of remoxipride and haloperidol in schizophrenia--a Canadian multicentre trial. Acta Psychiatr Scand Suppl (1990) 1.05