PubRank

Rune Linding

Author PubWeight™ 71.34‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Res 2003 6.86
2 Dynamic modularity in protein interaction networks predicts breast cancer outcome. Nat Biotechnol 2009 5.41
3 Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins. BMC Bioinformatics 2004 4.44
4 Linear motif atlas for phosphorylation-dependent signaling. Sci Signal 2008 3.77
5 Systematic discovery of new recognition peptides mediating protein interaction networks. PLoS Biol 2005 3.28
6 Phosphorylation dynamics during early differentiation of human embryonic stem cells. Cell Stem Cell 2009 3.03
7 ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic Acids Res 2009 2.59
8 Positive selection of tyrosine loss in metazoan evolution. Science 2009 2.28
9 Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases. Sci Signal 2009 2.16
10 Eukaryotic protein domains as functional units of cellular evolution. Sci Signal 2009 2.06
11 WW domains provide a platform for the assembly of multiprotein networks. Mol Cell Biol 2005 1.97
12 Cell-specific information processing in segregating populations of Eph receptor ephrin-expressing cells. Science 2009 1.91
13 A mitotic phosphorylation feedback network connects Cdk1, Plk1, 53BP1, and Chk2 to inactivate the G(2)/M DNA damage checkpoint. PLoS Biol 2010 1.90
14 Phosphorylation networks regulating JNK activity in diverse genetic backgrounds. Science 2008 1.86
15 Network medicine. FEBS Lett 2008 1.84
16 DNA damage activates a spatially distinct late cytoplasmic cell-cycle checkpoint network controlled by MK2-mediated RNA stabilization. Mol Cell 2010 1.78
17 Computational approaches to identify functional genetic variants in cancer genomes. Nat Methods 2013 1.64
18 Normalization of nomenclature for peptide motifs as ligands of modular protein domains. FEBS Lett 2002 1.46
19 OpenFreezer: a reagent information management software system. Nat Methods 2011 1.35
20 Verification of systems biology research in the age of collaborative competition. Nat Biotechnol 2011 1.28
21 Dissecting the interface between signaling and transcriptional regulation in human B cells. Pac Symp Biocomput 2009 1.28
22 Navigating cancer network attractors for tumor-specific therapy. Nat Biotechnol 2012 1.18
23 In vivo SILAC-based proteomics reveals phosphoproteome changes during mouse skin carcinogenesis. Cell Rep 2013 1.11
24 Simplistic pathways or complex networks? Curr Opin Genet Dev 2010 1.06
25 Network-based drugs and biomarkers. J Pathol 2010 1.01
26 Synthetic modular systems--reverse engineering of signal transduction. FEBS Lett 2005 0.98
27 Network medicine strikes a blow against breast cancer. Cell 2012 0.97
28 Directional and quantitative phosphorylation networks. Brief Funct Genomic Proteomic 2008 0.97
29 Roles of “junk phosphorylation” in modulating biomolecular association of phosphorylated proteins? Cell Cycle 2010 0.94
30 Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). Mol Cell Proteomics 2011 0.94
31 Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). J Proteome Res 2011 0.91
32 Global characterization of signalling networks associated with tamoxifen resistance in breast cancer. FEBS J 2013 0.91
33 Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics 2011 0.87
34 Experimental and computational tools useful for (re)construction of dynamic kinase-substrate networks. Proteomics 2009 0.84
35 Cells, shared memory and breaking the PTM code. Mol Syst Biol 2012 0.81
36 (R)evolution of complex regulatory systems. Sci Signal 2010 0.81
37 Identification of hypoxia-regulated proteins using MALDI-mass spectrometry imaging combined with quantitative proteomics. J Proteome Res 2014 0.80
38 PROTEINCHALLENGE: crowd sourcing in proteomics analysis and software development. J Proteomics 2012 0.78
39 Mutational properties of amino acid residues: implications for evolvability of phosphorylatable residues. Philos Trans R Soc Lond B Biol Sci 2012 0.78
40 BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases. Nucleic Acids Res 2003 0.76
41 Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics Clin Appl 2011 0.75
42 Experimental and computational tools for analysis of signaling networks in primary cells. Curr Protoc Immunol 2014 0.75