Published in J Am Soc Mass Spectrom on August 07, 2009
Interplay of permanent charge and hydrophobicity in the electrospray ionization of glycans. Anal Chem (2010) 0.99
Hydrophobic derivatization of N-linked glycans for increased ion abundance in electrospray ionization mass spectrometry. J Am Soc Mass Spectrom (2011) 0.97
Alkylating tryptic peptides to enhance electrospray ionization mass spectrometry analysis. Anal Chem (2010) 0.79
Evaluating nonpolar surface area and liquid chromatography/mass spectrometry response: an application for site occupancy measurements for enzyme intermediates in polyketide biosynthesis. Rapid Commun Mass Spectrom (2014) 0.78
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol (1999) 21.92
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics (2004) 19.05
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Practical implications of some recent studies in electrospray ionization fundamentals. Mass Spectrom Rev (2002) 3.13
Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry. J Proteome Res (2004) 2.85
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Modification of cysteine residues by alkylation. A tool in peptide mapping and protein identification. Anal Chem (1998) 1.90
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Quantification in proteomics through stable isotope coding: a review. J Proteome Res (2004) 1.73
Relating electrospray ionization response to nonpolar character of small peptides. Anal Chem (2000) 1.63
Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analyses. Anal Chem (2001) 1.53
Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry. Nat Biotechnol (2002) 1.53
Enhancing electrospray ionization efficiency of peptides by derivatization. Anal Chem (2006) 1.38
Global internal standard technology for comparative proteomics. J Chromatogr A (2002) 1.31
Protein profiling with cleavable isotope-coded affinity tag (cICAT) reagents: the yeast salinity stress response. Mol Cell Proteomics (2003) 1.29
Reduction and alkylation of proteins in preparation of two-dimensional map analysis: why, when, and how? Electrophoresis (2001) 1.23
Achieving augmented limits of detection for peptides with hydrophobic alkyl tags. Anal Chem (2007) 1.03
De novo peptide sequencing and quantitative profiling of complex protein mixtures using mass-coded abundance tagging. Nat Biotechnol (2002) 1.01
Absolute quantification of C-reactive protein in human plasma derived from patients with epithelial ovarian cancer utilizing protein cleavage isotope dilution mass spectrometry. J Proteome Res (2009) 0.99
Current chemical tagging strategies for proteome analysis by mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci (2004) 0.97
Synthesis, characterization, and application of iodoacetamide derivatives utilized for the ALiPHAT strategy. J Am Chem Soc (2008) 0.96
Modern strategies for protein quantification in proteome analysis: advantages and limitations. Mass Spectrom Rev (2003) 0.93
Implications of hydrophobicity and free energy of solvation for characterization of nucleic acids by electrospray ionization mass spectrometry. Anal Chem (2003) 0.92
Signature-peptide approach to detecting proteins in complex mixtures. J Chromatogr A (2000) 0.90
Derivatisation of arginine residues with malondialdehyde for the analysis of peptides and protein digests by LC-ESI-MS/MS. J Mass Spectrom (2006) 0.90
Derivatization by 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate for enhancing the ionization yield of small peptides and glycopeptides in matrix-assisted laser desorption/ionization and electrospray ionization mass spectrometry. Rapid Commun Mass Spectrom (2006) 0.88
Isotope-differentiated binding energy shift tags (IDBEST) for improved targeted biomarker discovery and validation. Expert Rev Proteomics (2004) 0.86
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry. J Proteome Res (2004) 2.85
Utilizing artificial neural networks in MATLAB to achieve parts-per-billion mass measurement accuracy with a fourier transform ion cyclotron resonance mass spectrometer. J Am Soc Mass Spectrom (2009) 2.02
Quantitative mass spectral evidence for the absence of circulating brain natriuretic peptide (BNP-32) in severe human heart failure. Proc Natl Acad Sci U S A (2005) 1.85
Chromatin assembly factor 1 interacts with histone H3 methylated at lysine 79 in the processes of epigenetic silencing and DNA repair. Biochemistry (2006) 1.61
Epithelial ovarian cancer: disease etiology, treatment, detection, and investigational gene, metabolite, and protein biomarkers. J Proteome Res (2007) 1.60
Performance characteristics of a new hybrid quadrupole time-of-flight tandem mass spectrometer (TripleTOF 5600). Anal Chem (2011) 1.59
Generation and detection of multiply-charged peptides and proteins by matrix-assisted laser desorption electrospray ionization (MALDESI) Fourier transform ion cyclotron resonance mass spectrometry. J Am Soc Mass Spectrom (2006) 1.55
Mass spectrometry-based biomarker discovery: toward a global proteome index of individuality. Annu Rev Anal Chem (Palo Alto Calif) (2009) 1.54
MSiReader: an open-source interface to view and analyze high resolving power MS imaging files on Matlab platform. J Am Soc Mass Spectrom (2013) 1.51
A method for calculating 16O/18O peptide ion ratios for the relative quantification of proteomes. J Am Soc Mass Spectrom (2004) 1.34
Detection of genetic variants of transthyretin by liquid chromatography-dual electrospray ionization fourier-transform ion-cyclotron-resonance mass spectrometry. Clin Chem (2004) 1.32
A method for automatically interpreting mass spectra of 18O-labeled isotopic clusters. Mol Cell Proteomics (2006) 1.27
Accessible proteomics space and its implications for peak capacity for zero-, one- and two-dimensional separations coupled with FT-ICR and TOF mass spectrometry. J Mass Spectrom (2006) 1.25
Coupling of a vented column with splitless nanoRPLC-ESI-MS for the improved separation and detection of brain natriuretic peptide-32 and its proteolytic peptides. J Chromatogr B Analyt Technol Biomed Life Sci (2009) 1.23
Dual electrospray ionization source for confident generation of accurate mass tags using liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry. Anal Chem (2003) 1.22
Synthetic applications of chiral 2,3-dihydro-4-pyridones. Curr Opin Drug Discov Devel (2002) 1.21
Androgens negatively regulate forkhead transcription factor FKHR (FOXO1) through a proteolytic mechanism in prostate cancer cells. J Biol Chem (2004) 1.20
Development of a robust and high throughput method for profiling N-linked glycans derived from plasma glycoproteins by NanoLC-FTICR mass spectrometry. J Proteome Res (2009) 1.19
Coordination-driven self-assembly of metallodendrimers possessing well-defined and controllable cavities as cores. J Am Chem Soc (2007) 1.18
Development of a nanoLC LTQ orbitrap mass spectrometric method for profiling glycans derived from plasma from healthy, benign tumor control, and epithelial ovarian cancer patients. Anal Chem (2009) 1.17
Identification of transthyretin variants by sequential proteomic and genomic analysis. Clin Chem (2004) 1.17
Infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI) imaging source coupled to a FT-ICR mass spectrometer. J Am Soc Mass Spectrom (2012) 1.15
Gentle protein ionization assisted by high-velocity gas flow. Anal Chem (2005) 1.13
Molecular architecture via coordination: self-assembly of nanoscale hexagonal metallodendrimers with designed building blocks. J Am Chem Soc (2006) 1.10
Construction of a versatile high precision ambient ionization source for direct analysis and imaging. J Am Soc Mass Spectrom (2008) 1.10
A new family of multiferrocene complexes with enhanced control of structure and stoichiometry via coordination-driven self-assembly and their electrochemistry. J Am Chem Soc (2008) 1.09
Advantages of Thermococcus kodakaraenis (KOD) DNA Polymerase for PCR-mass spectrometry based analyses. J Am Soc Mass Spectrom (2003) 1.08
A highly efficient approach to the self-assembly of hexagonal cavity-cored tris[2]pseudorotaxanes from several components via multiple noncovalent interactions. J Am Chem Soc (2007) 1.08
Discovery of ovarian cancer biomarkers in serum using NanoLC electrospray ionization TOF and FT-ICR mass spectrometry. Dis Markers (2004) 1.08
Direct comparison of stable isotope labeling by amino acids in cell culture and spectral counting for quantitative proteomics. Anal Chem (2010) 1.07
Stable-isotope labeled hydrophobic hydrazide reagents for the relative quantification of N-linked glycans by electrospray ionization mass spectrometry. Anal Chem (2011) 1.07
Identification of subunit-subunit interactions in bacteriophage P22 procapsids by chemical cross-linking and mass spectrometry. J Proteome Res (2006) 1.05
Membrane protein complexes catalyze both 4- and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis. Proc Natl Acad Sci U S A (2011) 1.05
Intact and top-down characterization of biomolecules and direct analysis using infrared matrix-assisted laser desorption electrospray ionization coupled to FT-ICR mass spectrometry. J Am Soc Mass Spectrom (2008) 1.05
Improving proteome coverage on a LTQ-Orbitrap using design of experiments. J Am Soc Mass Spectrom (2011) 1.04
IR-MALDESI mass spectrometry imaging of biological tissue sections using ice as a matrix. J Am Soc Mass Spectrom (2014) 1.04
Achieving augmented limits of detection for peptides with hydrophobic alkyl tags. Anal Chem (2007) 1.03
Coordination-driven self-assembly of cavity-cored multiple crown ether derivatives and poly[2]pseudorotaxanes. J Am Chem Soc (2008) 1.03
Evaluation of normalization methods on GeLC-MS/MS label-free spectral counting data to correct for variation during proteomic workflows. J Am Soc Mass Spectrom (2011) 1.03
Direct characterization of intact polypeptides by matrix-assisted laser desorption electrospray ionization quadrupole Fourier transform ion cyclotron resonance mass spectrometry. Rapid Commun Mass Spectrom (2007) 1.02
Poly specific trans-acyltransferase machinery revealed via engineered acyl-CoA synthetases. ACS Chem Biol (2012) 1.02
Quantitative top-down proteomics of SILAC labeled human embryonic stem cells. J Am Soc Mass Spectrom (2010) 1.01
Dual electrospray ion source for electron-transfer dissociation on a hybrid linear ion trap-orbitrap mass spectrometer. Anal Chem (2007) 1.01
Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa. Plant Cell (2014) 1.01
Analytical performance of a venturi device integrated into an electrospray ionization fourier transform ion cyclotron resonance mass spectrometer for analysis of nucleic acids. Anal Chem (2004) 1.00
Identification and replication of loci involved in camptothecin-induced cytotoxicity using CEPH pedigrees. PLoS One (2011) 1.00
Accurate mass precursor ion data and tandem mass spectrometry identify a class I human leukocyte antigen A*0201-presented peptide originating from vaccinia virus. J Am Soc Mass Spectrom (2005) 1.00
Absolute quantification of C-reactive protein in human plasma derived from patients with epithelial ovarian cancer utilizing protein cleavage isotope dilution mass spectrometry. J Proteome Res (2009) 0.99
Comparison of stable-isotope labeling with amino acids in cell culture and spectral counting for relative quantification of protein expression. Rapid Commun Mass Spectrom (2011) 0.99
Direct high-resolution peptide and protein analysis by desorption electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Rapid Commun Mass Spectrom (2006) 0.99
Interplay of permanent charge and hydrophobicity in the electrospray ionization of glycans. Anal Chem (2010) 0.99
Development and characterization of an ionization technique for analysis of biological macromolecules: liquid matrix-assisted laser desorption electrospray ionization. Anal Chem (2008) 0.97
Differential protein expression in male and female human lumbar cerebrospinal fluid using iTRAQ reagents after abundant protein depletion. Proteomics (2007) 0.97
Hydrophobic derivatization of N-linked glycans for increased ion abundance in electrospray ionization mass spectrometry. J Am Soc Mass Spectrom (2011) 0.97
Coordination-driven face-directed self-assembly of trigonal prisms. Face-based conformational chirality. J Am Chem Soc (2008) 0.96
Sub parts-per-million mass measurement accuracy of intact proteins and product ions achieved using a dual electrospray ionization quadrupole fourier transform ion cyclotron resonance mass spectrometer. J Am Soc Mass Spectrom (2006) 0.96
Synthesis, characterization, and application of iodoacetamide derivatives utilized for the ALiPHAT strategy. J Am Chem Soc (2008) 0.96
Detection of alternative splice variants at the proteome level in Aspergillus flavus. J Proteome Res (2010) 0.96
Proteomics characterization of cell membrane blebs in human retinal pigment epithelium cells. Mol Cell Proteomics (2009) 0.95
Evaluation of protein depletion methods for the analysis of total-, phospho- and glycoproteins in lumbar cerebrospinal fluid. J Proteome Res (2005) 0.95
Evaluation of a cleavable stable isotope labeled synthetic peptide for absolute protein quantification using LC-MS/MS. J Proteome Res (2004) 0.94
Gas-phase ion unimolecular dissociation for rapid phosphopeptide mapping by IRMPD in a Penning ion trap: an energetically favored process. J Am Chem Soc (2002) 0.94
Comprehensive quantification of monolignol-pathway enzymes in Populus trichocarpa by protein cleavage isotope dilution mass spectrometry. J Proteome Res (2012) 0.94
Identification and characterization of novel, naturally processed measles virus class II HLA-DRB1 peptides. J Virol (2004) 0.93
Mapping antiretroviral drugs in tissue by IR-MALDESI MSI coupled to the Q Exactive and comparison with LC-MS/MS SRM assay. J Am Soc Mass Spectrom (2014) 0.93
Elevated levels of phosphorylated fibrinogen-alpha-isoforms and differential expression of other post-translationally modified proteins in the plasma of ovarian cancer patients. J Proteome Res (2006) 0.93
Primary trabecular meshwork cells incubated in human aqueous humor differ from cells incubated in serum supplements. Invest Ophthalmol Vis Sci (2005) 0.93
Asymmetric total synthesis of (+)-cannabisativine. J Org Chem (2004) 0.92
Characterization of charge separation in the Array of Micromachined UltraSonic Electrospray (AMUSE) ion source for mass spectrometry. J Am Soc Mass Spectrom (2009) 0.92
Implications of hydrophobicity and free energy of solvation for characterization of nucleic acids by electrospray ionization mass spectrometry. Anal Chem (2003) 0.92
Global optimization of the infrared matrix-assisted laser desorption electrospray ionization (IR MALDESI) source for mass spectrometry using statistical design of experiments. Rapid Commun Mass Spectrom (2011) 0.92
Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS). Mol Cell Proteomics (2012) 0.92
Effect of matrix crystal structure on ion abundance of carbohydrates by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry. Rapid Commun Mass Spectrom (2007) 0.92
Monolignol pathway 4-coumaric acid:coenzyme A ligases in Populus trichocarpa: novel specificity, metabolic regulation, and simulation of coenzyme A ligation fluxes. Plant Physiol (2013) 0.91
Measuring the intra-individual variability of the plasma proteome in the chicken model of spontaneous ovarian adenocarcinoma. Anal Bioanal Chem (2010) 0.91
Analysis of the low molecular weight fraction of serum by LC-dual ESI-FT-ICR mass spectrometry: precision of retention time, mass, and ion abundance. Anal Chem (2004) 0.91
Probing the mechanisms of an air amplifier using a LTQ-FT-ICR-MS and fluorescence spectroscopy. J Am Soc Mass Spectrom (2007) 0.91
Stereoselective synthesis of acyclic amino alcohols via von Braun ring opening of chiral piperidines. Org Lett (2008) 0.90
Tandem mass spectrometry of thiolate-protected Au nanoparticles Na(x)Au25(SC2H4Ph)(18-y)(S(C2H4O)5CH3)(y). J Am Chem Soc (2009) 0.90
Naturally processed measles virus peptide eluted from class II HLA-DRB1*03 recognized by T lymphocytes from human blood. Virology (2003) 0.90
Temperature-dependent regulation of proteins in Aspergillus flavus: whole organism stable isotope labeling by amino acids. J Proteome Res (2008) 0.90
Systems biology of lignin biosynthesis in Populus trichocarpa: heteromeric 4-coumaric acid:coenzyme A ligase protein complex formation, regulation, and numerical modeling. Plant Cell (2014) 0.90
Concise total synthesis of the frog alkaloid (-)-205B. Angew Chem Int Ed Engl (2011) 0.90
Increasing the hydrophobicity and electrospray response of glycans through derivatization with novel cationic hydrazides. Chem Commun (Camb) (2009) 0.89
Factorial experimental designs elucidate significant variables affecting data acquisition on a quadrupole Orbitrap mass spectrometer. J Am Soc Mass Spectrom (2013) 0.88
In-depth analysis of the Magnaporthe oryzae conidial proteome. J Proteome Res (2012) 0.88
Synthetic studies toward (-)-FR901483 using a conjugate allylation to install the C-1 quaternary carbon. J Org Chem (2006) 0.88
Studying O-linked protein glycosylations in human plasma. J Proteome Res (2008) 0.87
Regioselective Sonogashira couplings of 2,4-dibromoquinolines. A correction. J Org Chem (2003) 0.87
Atmospheric pressure infrared (10.6 microm) laser desorption electrospray ionization (IR-LDESI) coupled to a LTQ Fourier transform ion cyclotron resonance mass spectrometer. Rapid Commun Mass Spectrom (2009) 0.87
A five-step synthesis of (S)-macrostomine from (S)-nicotine. Org Lett (2010) 0.87