Published in Dev Dyn on November 01, 2009
Branch mode selection during early lung development. PLoS Comput Biol (2012) 1.14
Branching patterns emerge in a mathematical model of the dynamics of lung development. J Physiol (2013) 1.00
The control of branching morphogenesis. Open Biol (2013) 1.00
A role for mesenchyme dynamics in mouse lung branching morphogenesis. PLoS One (2012) 0.93
Quantifying stretch and secretion in the embryonic lung: Implications for morphogenesis. Mech Dev (2015) 0.87
Shape self-regulation in early lung morphogenesis. PLoS One (2012) 0.86
FGF-Regulated ETV Transcription Factors Control FGF-SHH Feedback Loop in Lung Branching. Dev Cell (2015) 0.81
Mathematical study of the role of Delta/Notch lateral inhibition during primary branching of Drosophila trachea development. Biophys J (2012) 0.77
Computational models of airway branching morphogenesis. Semin Cell Dev Biol (2016) 0.75
In vitro morphological bud formation in organ-like three-dimensional structure from mouse ES cells induced by FGF10 signaling. Commun Integr Biol (2012) 0.75
Dynamics of chronic myeloid leukaemia. Nature (2005) 6.63
How should we define goodness?--reputation dynamics in indirect reciprocity. J Theor Biol (2004) 2.81
Dynamics of cancer progression. Nat Rev Cancer (2004) 2.64
The leading eight: social norms that can maintain cooperation by indirect reciprocity. J Theor Biol (2005) 2.26
The coevolution of altruism and punishment: role of the selfish punisher. J Theor Biol (2005) 1.78
Can chromosomal instability initiate tumorigenesis? Semin Cancer Biol (2005) 1.77
Indirect reciprocity provides only a narrow margin of efficiency for costly punishment. Nature (2009) 1.70
The linear process of somatic evolution. Proc Natl Acad Sci U S A (2003) 1.66
Evolutionary dynamics of tumor suppressor gene inactivation. Proc Natl Acad Sci U S A (2004) 1.61
The evolution of two mutations during clonal expansion. Genetics (2007) 1.52
Dynamics of colorectal cancer. Semin Cancer Biol (2005) 1.50
Global analyses of evolutionary dynamics and exhaustive search for social norms that maintain cooperation by reputation. J Theor Biol (2006) 1.41
Genetic addiction: selfish gene's strategy for symbiosis in the genome. Genetics (2005) 1.27
Linear model of colon cancer initiation. Cell Cycle (2004) 1.26
The age incidence of chronic myeloid leukemia can be explained by a one-mutation model. Proc Natl Acad Sci U S A (2006) 1.17
Evolution of resistance to cancer therapy. Curr Pharm Des (2006) 1.17
Stochastic elimination of cancer cells. Proc Biol Sci (2003) 1.16
Patterns of cell division and the risk of cancer. Genetics (2003) 1.15
Comment on "Extinction debt and windows of conservation opportunity in the Brazilian Amazon". Science (2013) 1.14
A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression. Biophys J (2006) 1.10
Neutral theory as a predictor of avifaunal extinctions after habitat loss. Proc Natl Acad Sci U S A (2011) 1.08
Stochastic dynamics of metastasis formation. J Theor Biol (2005) 1.07
Saturation of enzyme kinetics in circadian clock models. J Biol Rhythms (2002) 1.05
Somatic selection for and against cancer. J Theor Biol (2003) 1.05
Stripes, spots, or reversed spots in two-dimensional Turing systems. J Theor Biol (2003) 1.05
Dynamics of metastasis suppressor gene inactivation. J Theor Biol (2006) 1.04
The pace of evolution across fitness valleys. J Theor Biol (2009) 1.04
Comparative study of circadian clock models, in search of processes promoting oscillation. J Theor Biol (2002) 1.04
The evolution of a Müllerian mimic in a spatially distributed community. J Theor Biol (2005) 1.02
Local regulation of homeostasis favors chromosomal instability. Curr Biol (2003) 1.02
Genetic instability and clonal expansion. J Theor Biol (2006) 1.00
How canalization can make loops: a new model of reticulated leaf vascular pattern formation. J Theor Biol (2006) 1.00
Evolution towards oscillation or stability in a predator-prey system. Proc Biol Sci (2010) 0.99
Optimal growth pattern of defensive organs: the diversity of shell growth among mollusks. Am Nat (2004) 0.95
A symmetry of fixation times in evoultionary dynamics. J Theor Biol (2006) 0.95
Coupled ecological-social dynamics in a forested landscape: spatial interactions and information flow. J Theor Biol (2007) 0.94
Growth based morphogenesis of vertebrate limb bud. Bull Math Biol (2008) 0.93
Temperature compensation in circadian clock models. J Theor Biol (2004) 0.93
Unique coevolutionary dynamics in a predator-prey system. J Theor Biol (2011) 0.93
Traveling wave formation in vertebrate segmentation. J Theor Biol (2009) 0.92
Single-class orbits in nonlinear Leslie matrix models for semelparous populations. J Math Biol (2007) 0.92
Sexual selection can increase the effect of random genetic drift--a quantitative genetic model of polymorphism in Oophaga pumilio, the strawberry poison-dart frog. Evolution (2009) 0.91
Direction of regeneration waves in grid-based models for forest dynamics. J Theor Biol (2006) 0.90
Directionality of stripes formed by anisotropic reaction-diffusion models. J Theor Biol (2002) 0.89
Optimal defense strategy: storage vs. new production. J Theor Biol (2002) 0.88
Species persistence in landscapes with spatial variation in habitat quality: a pair approximation model. J Theor Biol (2013) 0.88
Accuracy of positional information provided by multiple morphogen gradients with correlated noise. Phys Rev E Stat Nonlin Soft Matter Phys (2009) 0.88
Random cell movement promotes synchronization of the segmentation clock. Proc Natl Acad Sci U S A (2010) 0.87
Origin of directionality in the fish stripe pattern. Dev Dyn (2003) 0.85
Probability of resistance evolution for exponentially growing virus in the host. J Theor Biol (2007) 0.84
Estimating local interaction from spatiotemporal forest data, and Monte Carlo bias correction. J Theor Biol (2004) 0.84
Coevolution of phenotypic plasticity in predator and prey: why are inducible offenses rarer than inducible defenses? Evolution (2010) 0.84
A stochastic model of chromatin modification: cell population coding of winter memory in plants. J Theor Biol (2012) 0.83
Dynamic modeling of branching morphogenesis of ureteric bud in early kidney development. J Theor Biol (2009) 0.83
Detection of human cytomegalovirus DNA in perilymph of patients with sensorineural hearing loss using real-time PCR. J Med Virol (2003) 0.83
Distance between AER and ZPA is defined by feed-forward loop and is stabilized by their feedback loop in vertebrate limb bud. Bull Math Biol (2007) 0.81
Detection of herpesvirus DNAs in perilymph obtained from patients with sensorineural hearing loss by real-time polymerase chain reaction. Laryngoscope (2004) 0.81
Robustness of the signal transduction system of the mammalian JAK/STAT pathway and dimerization steps. J Theor Biol (2006) 0.81
Turing pattern formation with two kinds of cells and a diffusive chemical. Bull Math Biol (2007) 0.80
Dynamic optimization of host defense, immune memory, and post-infection pathogen levels in mammals. J Theor Biol (2004) 0.80
The fastest evolutionary trajectory. J Theor Biol (2007) 0.80
Encoding and decoding of positional information in morphogen-dependent patterning. Curr Opin Genet Dev (2012) 0.80
Signaling efficacy drives the evolution of larger sexual ornaments by sexual selection. Evolution (2013) 0.79
Difference in the retinal cone mosaic pattern between zebrafish and medaka: cell-rearrangement model. J Theor Biol (2003) 0.79
Regime shift and robustness of organism-created environments: A model for microbial ecosystems. J Theor Biol (2010) 0.79
Coexistence of a sexual and an unisexual form stabilized by parasites. J Theor Biol (2004) 0.79
Possibility of tissue separation caused by cell adhesion. J Theor Biol (2003) 0.79
Evolutionary branching in a finite population: deterministic branching vs. stochastic branching. Genetics (2012) 0.78
Multiple feedback loops achieve robust localization of wingless expression in Drosophila notum development. J Theor Biol (2011) 0.78
Coding design of positional information for robust morphogenesis. Biophys J (2011) 0.77
Mathematical study of the role of Delta/Notch lateral inhibition during primary branching of Drosophila trachea development. Biophys J (2012) 0.77
Optimal number of regulatory T cells. J Theor Biol (2009) 0.77
Stochastic Tunneling of Two Mutations in a Population of Cancer Cells. PLoS One (2013) 0.77
Neutrality without incoherence: a response to Clark. Trends Ecol Evol (2012) 0.77
Optimal choice between feedforward and feedback control in gene expression to cope with unpredictable danger. J Theor Biol (2003) 0.76
Estimating the spatiotemporal pattern of volumetric growth rate from fate maps in chick limb development. Dev Dyn (2009) 0.76
Cultural evolution of a belief controlling human mate choice: dynamic modeling of the hinoeuma superstition in Japan. J Theor Biol (2012) 0.76
Long-term effect of coral transplantation: restoration goals and the choice of species. J Theor Biol (2011) 0.76
Pollinator coupling can induce synchronized flowering in different plant species. J Theor Biol (2010) 0.75
On the emergence of multifocal cancers. J Carcinog (2004) 0.75
COOPERATION MAINTAINED BY FITNESS ADJUSTMENT. Evol Ecol Res (2007) 0.75
The handicap process favors exaggerated, rather than reduced, sexual ornaments. Evolution (2014) 0.75
Extinction risk to bird populations caused by DDT exposure. Chemosphere (2003) 0.75
Multiple-year optimization of conservation effort and monitoring effort for a fluctuating population. J Theor Biol (2004) 0.75
Extinction risk to herring gull populations from DDT exposure. Environ Toxicol Chem (2002) 0.75
Global mutations and local mutations have very different effects on evolution, illustrated by mixed strategies of asymmetric binary games. J Theor Biol (2009) 0.75
Popliteal angle in infants with west syndrome. J Child Neurol (2006) 0.75
Conservation effort and assessment of population size in fluctuating environments. J Theor Biol (2003) 0.75
Forest gap dynamics and the Ising model. J Theor Biol (2004) 0.75
Incomplete mixing promotes species coexistence in a lottery model with permanent spatial heterogeneity. Theor Popul Biol (2003) 0.75
Environmental risk evaluation of chemicals: achievements of the project and seeds for future--development of metrics for evaluating risks. Chemosphere (2003) 0.75
Coevolution of mast seeding in trees and extended diapause of seed predators. J Theor Biol (2013) 0.75
Evolution of stalk/spore ratio in a social amoeba: cell-to-cell interaction via a signaling chemical shaped by cheating risk. J Theor Biol (2013) 0.75
Extinction risk of a meta-population: aggregation approach. J Theor Biol (2005) 0.75