Published in Plant Physiol on November 25, 2009
A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions. Plant Physiol (2010) 1.17
Flux-balance modeling of plant metabolism. Front Plant Sci (2011) 1.11
Carbon and nitrogen provisions alter the metabolic flux in developing soybean embryos. Plant Physiol (2013) 0.95
Experimental flux measurements on a network scale. Front Plant Sci (2011) 0.86
Integration of metabolomics data into metabolic networks. Front Plant Sci (2015) 0.86
Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments. Plant Cell Environ (2012) 0.84
Flux profiling of photosynthetic carbon metabolism in intact plants. Nat Protoc (2014) 0.82
Chloroplast-localized 6-phosphogluconate dehydrogenase is critical for maize endosperm starch accumulation. J Exp Bot (2013) 0.81
Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing Solanum lycopersicum (tomato) fruit. Plant J (2014) 0.80
Linking metabolomics data to underlying metabolic regulation. Front Mol Biosci (2014) 0.80
Capturing metabolite channeling in metabolic flux phenotypes. Plant Physiol (2011) 0.79
Predictive sulfur metabolism - a field in flux. Front Plant Sci (2014) 0.78
A systematic simulation of the effect of salicylic acid on sphingolipid metabolism. Front Plant Sci (2015) 0.77
Impacts of high ATP supply from chloroplasts and mitochondria on the leaf metabolism of Arabidopsis thaliana. Front Plant Sci (2015) 0.77
Metabolic model of central carbon and energy metabolisms of growing Arabidopsis thaliana in relation to sucrose translocation. BMC Plant Biol (2016) 0.75
Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach. Plant Physiol (2016) 0.75
A Benchtop Fractionation Procedure for Subcellular Analysis of the Plant Metabolome. Front Plant Sci (2016) 0.75
Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets. Front Genet (2017) 0.75
Advances in flux balance analysis. Curr Opin Biotechnol (2003) 5.50
Ethanol Metabolism in Plant Tissues. Plant Physiol (1963) 4.69
The oxidative pentose phosphate pathway: structure and organisation. Curr Opin Plant Biol (2003) 2.34
Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space. J Theor Biol (2004) 2.24
A universal framework for 13C metabolic flux analysis. Metab Eng (2001) 2.18
The principle of flux minimization and its application to estimate stationary fluxes in metabolic networks. Eur J Biochem (2004) 2.12
A genome-scale metabolic model of Arabidopsis and some of its properties. Plant Physiol (2009) 1.95
Is maximization of molar yield in metabolic networks favoured by evolution? J Theor Biol (2007) 1.88
A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos. J Biol Chem (2003) 1.74
Exploiting the bootstrap method for quantifying parameter confidence intervals in dynamical systems. Metab Eng (2006) 1.60
Measuring multiple fluxes through plant metabolic networks. Plant J (2006) 1.59
Mitochondrial metabolism in developing embryos of Brassica napus. J Biol Chem (2006) 1.53
The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells. J Biol Chem (2002) 1.47
Alanine aminotransferase catalyses the breakdown of alanine after hypoxia in Arabidopsis thaliana. Plant J (2007) 1.47
Quantification of compartmented metabolic fluxes in maize root tips using isotope distribution from 13C- or 14C-labeled glucose. J Biol Chem (1995) 1.47
Flux balance analysis of barley seeds: a computational approach to study systemic properties of central metabolism. Plant Physiol (2008) 1.43
P/O ratios of mitochondrial oxidative phosphorylation. Biochim Biophys Acta (2005) 1.43
Compartmentation in plant metabolism. J Exp Bot (2006) 1.38
Separation of lipid classes by solid phase extraction. J Lipid Res (1990) 1.35
Parallel determination of enzyme activities and in vivo fluxes in Brassica napus embryos grown on organic or inorganic nitrogen source. Phytochemistry (2007) 1.29
Metabolic network fluxes in heterotrophic Arabidopsis cells: stability of the flux distribution under different oxygenation conditions. Plant Physiol (2008) 1.27
Metabolic flux analysis as a tool in metabolic engineering of plants. Curr Opin Biotechnol (2008) 1.27
The role of light in soybean seed filling metabolism. Plant J (2008) 1.26
Molecular biology of the plastidic phosphorylated serine biosynthetic pathway in Arabidopsis thaliana. Amino Acids (2001) 1.26
1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues. Nat Protoc (2008) 1.25
Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos. Plant J (2007) 1.22
Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell (2006) 1.20
Metabolic flux analysis in plants: from intelligent design to rational engineering. Annu Rev Plant Biol (2008) 1.18
Light enables a very high efficiency of carbon storage in developing embryos of rapeseed. Plant Physiol (2005) 1.16
Isoenzyme replacement of glucose-6-phosphate dehydrogenase in the cytosol improves stress tolerance in plants. Proc Natl Acad Sci U S A (2009) 1.11
Insights into plant metabolic networks from steady-state metabolic flux analysis. Biochimie (2009) 1.11
Getting to grips with the plant metabolic network. Biochem J (2008) 1.10
The response of carbohydrate metabolism in potato tubers to low temperature. Plant Cell Physiol (2006) 1.06
Revisiting the 13C-label distribution of the non-oxidative branch of the pentose phosphate pathway based upon kinetic and genetic evidence. FEBS J (2005) 1.03
Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons. Plant Cell Environ (2008) 1.02
Functional analyses of cytosolic glucose-6-phosphate dehydrogenases and their contribution to seed oil accumulation in Arabidopsis. Plant Physiol (2007) 1.01
Strategies for metabolic flux analysis in plants using isotope labelling. J Biotechnol (2000) 0.97
Rapid simulation and analysis of isotopomer distributions using constraints based on enzyme mechanisms: an example from HT29 cancer cells. Bioinformatics (2005) 0.97
Engineering central metabolism in crop species: learning the system. Metab Eng (2003) 0.94
Compartment-specific labeling information in 13C metabolic flux analysis of plants. Phytochemistry (2007) 0.93
Flux quantification in central carbon metabolism of Catharanthus roseus hairy roots by 13C labeling and comprehensive bondomer balancing. Phytochemistry (2007) 0.91
A new substrate cycle in plants. Evidence for a high glucose-phosphate-to-glucose turnover from in vivo steady-state and pulse-labeling experiments with [13C]glucose and [14C]glucose. Plant Physiol (2005) 0.90
Revealing metabolic phenotypes in plants: inputs from NMR analysis. Biol Rev Camb Philos Soc (2005) 0.90
Network flux analysis: impact of 13C-substrates on metabolism in Arabidopsis thaliana cell suspension cultures. Phytochemistry (2007) 0.88
Vacuolar compartmentation complicates the steady-state analysis of glucose metabolism and forces reappraisal of sucrose cycling in plants. Phytochemistry (2007) 0.83
Influence of Elevated Fructose-2,6-Bisphosphate Levels on Starch Mobilization in Transgenic Tobacco Leaves in the Dark. Plant Physiol (1995) 0.82
Substrate cycles in the central metabolism of maize root tips under hypoxia. Phytochemistry (2007) 0.81
Validation of the design of feeding experiments involving [(14)C]substrates used to monitor metabolic flux in higher plants. Phytochemistry (2008) 0.80
Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus. PLoS Genet (2009) 3.25
Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci (2010) 1.96
Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function. Plant J (2007) 1.84
Analysis of the sucrose synthase gene family in Arabidopsis. Plant J (2007) 1.84
Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiol (2005) 1.75
Glycolytic enzymes associate dynamically with mitochondria in response to respiratory demand and support substrate channeling. Plant Cell (2007) 1.62
Quantitative analysis of DNA methylation at all human imprinted regions reveals preservation of epigenetic stability in adult somatic tissue. Epigenetics Chromatin (2011) 1.48
Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer. Hum Mol Genet (2008) 1.47
¹³C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation. PLoS Pathog (2011) 1.32
Metabolic network fluxes in heterotrophic Arabidopsis cells: stability of the flux distribution under different oxygenation conditions. Plant Physiol (2008) 1.27
1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues. Nat Protoc (2008) 1.25
Activation and function of mitochondrial uncoupling protein in plants. J Biol Chem (2004) 1.23
Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis. Plant Physiol (2008) 1.22
A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions. Plant Physiol (2010) 1.17
A mutant of Arabidopsis lacking the triose-phosphate/phosphate translocator reveals metabolic regulation of starch breakdown in the light. Plant Physiol (2004) 1.13
Flux-balance modeling of plant metabolism. Front Plant Sci (2011) 1.11
Insights into plant metabolic networks from steady-state metabolic flux analysis. Biochimie (2009) 1.11
Plastidial glycolysis in developing Arabidopsis embryos. New Phytol (2009) 1.09
The response of carbohydrate metabolism in potato tubers to low temperature. Plant Cell Physiol (2006) 1.06
A method for accounting for maintenance costs in flux balance analysis improves the prediction of plant cell metabolic phenotypes under stress conditions. Plant J (2013) 1.00
Network flux analysis: impact of 13C-substrates on metabolism in Arabidopsis thaliana cell suspension cultures. Phytochemistry (2007) 0.88
Modelling metabolic CO₂ evolution--a fresh perspective on respiration. Plant Cell Environ (2013) 0.87
Antisense suppression of the small chloroplast protein CP12 in tobacco alters carbon partitioning and severely restricts growth. Plant Physiol (2011) 0.87
The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a complex response to changes in nitrogen supply. Plant J (2013) 0.87
Metabolic engineering of tomato fruit organic acid content guided by biochemical analysis of an introgression line. Plant Physiol (2012) 0.87
Mitochondrial cysteine synthase complex regulates O-acetylserine biosynthesis in plants. J Biol Chem (2012) 0.87
Quantitative analysis of DNA methylation of imprinted genes in single human blastocysts by pyrosequencing. Fertil Steril (2011) 0.84
Vacuolar compartmentation complicates the steady-state analysis of glucose metabolism and forces reappraisal of sucrose cycling in plants. Phytochemistry (2007) 0.83
Structural insights into P-glycoprotein (ABCB1) by small angle X-ray scattering and electron crystallography. FEBS Lett (2008) 0.83
Monitoring flux through the oxidative pentose phosphate pathway using [1-14C]gluconate. Planta (2002) 0.82
Kinetic properties of bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase from spinach leaves. Eur J Biochem (2002) 0.81
Lack of fructose 2,6-bisphosphate compromises photosynthesis and growth in Arabidopsis in fluctuating environments. Plant J (2015) 0.80
Dynamics of Arabidopsis thaliana soluble proteome in response to different nutrient culture conditions. Electrophoresis (2006) 0.80
Validation of the design of feeding experiments involving [(14)C]substrates used to monitor metabolic flux in higher plants. Phytochemistry (2008) 0.80
DNA repair: BRCA2 gets protective at forks. Nat Rev Mol Cell Biol (2011) 0.80
Capturing metabolite channeling in metabolic flux phenotypes. Plant Physiol (2011) 0.79
Nitric oxide is required for homeostasis of oxygen and reactive oxygen species in barley roots under aerobic conditions. Mol Plant (2013) 0.79
Relationship between the structural and functional changes of the photosynthetic apparatus during chloroplast-chromoplast transition in flower bud of Lilium longiflorum. Photochem Photobiol (2002) 0.79
Source of sugar nucleotides for starch and cellulose synthesis. Proc Natl Acad Sci U S A (2012) 0.78
Optimization of steady-state ¹³C-labeling experiments for metabolic flux analysis. Methods Mol Biol (2014) 0.77
Quantification of ¹³C enrichments and isotopomer abundances for metabolic flux analysis using 1D NMR spectroscopy. Methods Mol Biol (2014) 0.77
Characterization of glycolytic initial metabolites and enzyme activities in developing sunflower (Helianthus annuus L.) seeds. Phytochemistry (2009) 0.77
HIV: HIV hides in haematopoietic stem cells. Nat Rev Microbiol (2011) 0.77
Deamination role of inducible glutamate dehydrogenase isoenzyme 7 in Brassica napus leaf protoplasts. Phytochemistry (2011) 0.76
Cellular microbiology: Rulers and sensors in Chlamydomonas. Nat Rev Microbiol (2011) 0.76
Development: a new move for PRMT5. Nat Rev Mol Cell Biol (2011) 0.76
Chromatin: Stress inhibits replication through JNK1 signalling. Nat Rev Mol Cell Biol (2011) 0.75
Contact killing by Pseudomonas. Nat Rev Microbiol (2011) 0.75
Bacterial pathogenesis. Neisseria meningitidis: hit and run. Nat Rev Microbiol (2011) 0.75
Plant virology: Sign turns yellow for Y-sat-infected tobacco. Nat Rev Microbiol (2011) 0.75
Parasitology: Leishmania turns down the heat. Nat Rev Microbiol (2011) 0.75
Chromatin: the inheritance of stress. Nat Rev Mol Cell Biol (2011) 0.75
Circadian rhythms: I'm not fat, I just need more sleep. Nat Rev Mol Cell Biol (2011) 0.75
Parasitology: It takes II to induce NF-κB. Nat Rev Microbiol (2011) 0.75
Cell division: CENPA's tail rules the centromere. Nat Rev Mol Cell Biol (2011) 0.75
Guarding the guard cells? New Phytol (2014) 0.75
Gene expression: RNAPII stands alone. Nat Rev Mol Cell Biol (2011) 0.75
Environmental microbiology: boring bacteria? Nat Rev Microbiol (2011) 0.75
DNA damage: problems with too much packaging. Nat Rev Mol Cell Biol (2011) 0.75
Metabolic regulation by ERK. Nat Rev Mol Cell Biol (2011) 0.75
Gene expression: Misreading the code. Nat Rev Mol Cell Biol (2011) 0.75
Symbiosis: market economics in plant-fungus relationships. Nat Rev Microbiol (2011) 0.75
Analysis of DNA Methylation Patterns in Single Blastocysts by Pyrosequencing®. Methods Mol Biol (2015) 0.75