PubRank

Lars J Jensen

Author PubWeight™ 130.95‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. Nucleic Acids Res 2010 18.73
2 STRING v9.1: protein-protein interaction networks, with increased coverage and integration. Nucleic Acids Res 2012 18.26
3 STRING 7--recent developments in the integration and prediction of protein interactions. Nucleic Acids Res 2006 12.16
4 STRING: known and predicted protein-protein associations, integrated and transferred across organisms. Nucleic Acids Res 2005 10.44
5 Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. Sci Signal 2010 8.61
6 Mining electronic health records: towards better research applications and clinical care. Nat Rev Genet 2012 4.42
7 eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges. Nucleic Acids Res 2011 3.94
8 eggNOG v4.0: nested orthology inference across 3686 organisms. Nucleic Acids Res 2013 3.77
9 Phospho.ELM: a database of phosphorylation sites--update 2011. Nucleic Acids Res 2010 3.38
10 A temporal map of transcription factor activity: mef2 directly regulates target genes at all stages of muscle development. Dev Cell 2006 3.29
11 Protein interaction networks from yeast to human. Curr Opin Struct Biol 2004 3.15
12 Reflect: augmented browsing for the life scientist. Nat Biotechnol 2009 2.99
13 Quantifying environmental adaptation of metabolic pathways in metagenomics. Proc Natl Acad Sci U S A 2009 2.89
14 Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs. Nat Biotechnol 2004 2.83
15 Origin of replication in circular prokaryotic chromosomes. Environ Microbiol 2006 2.55
16 Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. Mol Cell Proteomics 2010 2.43
17 STITCH 4: integration of protein-chemical interactions with user data. Nucleic Acids Res 2013 2.32
18 Systematic association of genes to phenotypes by genome and literature mining. PLoS Biol 2005 2.25
19 Using electronic patient records to discover disease correlations and stratify patient cohorts. PLoS Comput Biol 2011 2.14
20 Specific CLK inhibitors from a novel chemotype for regulation of alternative splicing. Chem Biol 2011 2.06
21 Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation. Sci Signal 2011 1.84
22 Extraction of transcript diversity from scientific literature. PLoS Comput Biol 2005 1.64
23 Proteomic analysis of a pleistocene mammoth femur reveals more than one hundred ancient bone proteins. J Proteome Res 2011 1.62
24 Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis. Mol Syst Biol 2007 1.53
25 Predicting biological networks from genomic data. FEBS Lett 2008 1.51
26 High-resolution transcription atlas of the mitotic cell cycle in budding yeast. Genome Biol 2010 1.51
27 Assessing systems properties of yeast mitochondria through an interaction map of the organelle. PLoS Genet 2006 1.31
28 Sequence-based feature prediction and annotation of proteins. Genome Biol 2009 1.28
29 Synergistic activation of vascular TRPC6 channel by receptor and mechanical stimulation via phospholipase C/diacylglycerol and phospholipase A2/omega-hydroxylase/20-HETE pathways. Circ Res 2009 1.23
30 In vivo phosphoproteomics analysis reveals the cardiac targets of β-adrenergic receptor signaling. Sci Signal 2013 1.22
31 Ten simple rules for getting help from online scientific communities. PLoS Comput Biol 2011 1.12
32 Large-scale extraction of gene regulation for model organisms in an ontological context. In Silico Biol 2005 1.09
33 Expression of connexin 37, 40 and 43 in rat mesenteric arterioles and resistance arteries. Histochem Cell Biol 2003 1.01
34 Martini: using literature keywords to compare gene sets. Nucleic Acids Res 2009 0.95
35 Protein feature based identification of cell cycle regulated proteins in yeast. J Mol Biol 2003 0.86
36 TIMP-1 increases expression and phosphorylation of proteins associated with drug resistance in breast cancer cells. J Proteome Res 2013 0.86
37 Functional network analysis of obese and lean Göttingen minipigs elucidates changes in oxidative and inflammatory networks in obese pigs. Pflugers Arch 2014 0.76
38 Reply to 'Mining electronic health records: an additional perspective'. Nat Rev Genet 2013 0.75