| Rank |
Title |
Journal |
Year |
PubWeight™‹?› |
|
1
|
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice.
|
Nature
|
2006
|
6.68
|
|
2
|
Reference genome sequence of the model plant Setaria.
|
Nat Biotechnol
|
2012
|
3.21
|
|
3
|
A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice.
|
Plant Cell
|
2006
|
2.95
|
|
4
|
Retracted
A type I-secreted, sulfated peptide triggers XA21-mediated innate immunity.
|
Science
|
2009
|
2.57
|
|
5
|
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A.
|
BMC Genomics
|
2008
|
2.51
|
|
6
|
Xanthomonas oryzae pathovars: model pathogens of a model crop.
|
Mol Plant Pathol
|
2006
|
2.14
|
|
7
|
Plant innate immunity: perception of conserved microbial signatures.
|
Annu Rev Plant Biol
|
2012
|
1.91
|
|
8
|
Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
|
Mol Plant Microbe Interact
|
2005
|
1.91
|
|
9
|
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.
|
J Bacteriol
|
2011
|
1.80
|
|
10
|
Rice XA21 binding protein 3 is a ubiquitin ligase required for full Xa21-mediated disease resistance.
|
Plant Cell
|
2006
|
1.74
|
|
11
|
Protein abundances are more conserved than mRNA abundances across diverse taxa.
|
Proteomics
|
2010
|
1.71
|
|
12
|
A novel system for gene silencing using siRNAs in rice leaf and stem-derived protoplasts.
|
Plant Methods
|
2006
|
1.70
|
|
13
|
From the Academy: Colloquium review. Unique characteristics of Xanthomonas oryzae pv. oryzae AvrXa21 and implications for plant innate immunity.
|
Proc Natl Acad Sci U S A
|
2006
|
1.57
|
|
14
|
Engineering pathogen resistance in crop plants.
|
Transgenic Res
|
2002
|
1.53
|
|
15
|
Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy.
|
PLoS One
|
2008
|
1.53
|
|
16
|
Bacterial genes involved in type I secretion and sulfation are required to elicit the rice Xa21-mediated innate immune response.
|
Mol Plant Microbe Interact
|
2004
|
1.48
|
|
17
|
Towards establishment of a rice stress response interactome.
|
PLoS Genet
|
2011
|
1.47
|
|
18
|
OsWRKY62 is a negative regulator of basal and Xa21-mediated defense against Xanthomonas oryzae pv. oryzae in rice.
|
Mol Plant
|
2008
|
1.45
|
|
19
|
Towards a better bowl of rice: assigning function to tens of thousands of rice genes.
|
Nat Rev Genet
|
2008
|
1.44
|
|
20
|
Rice XB15, a protein phosphatase 2C, negatively regulates cell death and XA21-mediated innate immunity.
|
PLoS Biol
|
2008
|
1.42
|
|
21
|
Rice NRR, a negative regulator of disease resistance, interacts with Arabidopsis NPR1 and rice NH1.
|
Plant J
|
2005
|
1.41
|
|
22
|
The Arabidopsis flagellin receptor FLS2 mediates the perception of Xanthomonas Ax21 secreted peptides.
|
Proc Natl Acad Sci U S A
|
2011
|
1.37
|
|
23
|
Overexpression of the endoplasmic reticulum chaperone BiP3 regulates XA21-mediated innate immunity in rice.
|
PLoS One
|
2010
|
1.32
|
|
24
|
A rice kinase-protein interaction map.
|
Plant Physiol
|
2008
|
1.28
|
|
25
|
Genetic dissection of the biotic stress response using a genome-scale gene network for rice.
|
Proc Natl Acad Sci U S A
|
2011
|
1.27
|
|
26
|
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
|
Plant Physiol
|
2010
|
1.23
|
|
27
|
An ATPase promotes autophosphorylation of the pattern recognition receptor XA21 and inhibits XA21-mediated immunity.
|
Proc Natl Acad Sci U S A
|
2010
|
1.20
|
|
28
|
The Rice Oligonucleotide Array Database: an atlas of rice gene expression.
|
Rice (N Y)
|
2012
|
1.20
|
|
29
|
Overexpression of (At)NPR1 in rice leads to a BTH- and environment-induced lesion-mimic/cell death phenotype.
|
Mol Plant Microbe Interact
|
2004
|
1.20
|
|
30
|
Tyrosine sulfation in a Gram-negative bacterium.
|
Nat Commun
|
2012
|
1.13
|
|
31
|
Loss of Cellulose synthase-like F6 function affects mixed-linkage glucan deposition, cell wall mechanical properties, and defense responses in vegetative tissues of rice.
|
Plant Physiol
|
2012
|
1.12
|
|
32
|
Cleavage and nuclear localization of the rice XA21 immune receptor.
|
Nat Commun
|
2012
|
1.10
|
|
33
|
XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan.
|
Proc Natl Acad Sci U S A
|
2012
|
1.09
|
|
34
|
Innate immunity in rice.
|
Trends Plant Sci
|
2011
|
1.08
|
|
35
|
Construction of a rice glycosyltransferase phylogenomic database and identification of rice-diverged glycosyltransferases.
|
Mol Plant
|
2008
|
1.08
|
|
36
|
An XA21-associated kinase (OsSERK2) regulates immunity mediated by the XA21 and XA3 immune receptors.
|
Mol Plant
|
2014
|
1.08
|
|
37
|
Recent advances in dissecting stress-regulatory crosstalk in rice.
|
Mol Plant
|
2013
|
1.06
|
|
38
|
Overexpression of a BAHD acyltransferase, OsAt10, alters rice cell wall hydroxycinnamic acid content and saccharification.
|
Plant Physiol
|
2013
|
1.06
|
|
39
|
A conserved threonine residue in the juxtamembrane domain of the XA21 pattern recognition receptor is critical for kinase autophosphorylation and XA21-mediated immunity.
|
J Biol Chem
|
2010
|
1.05
|
|
40
|
Biochemical characterization of the kinase domain of the rice disease resistance receptor-like kinase XA21.
|
J Biol Chem
|
2002
|
1.05
|
|
41
|
A genome-wide survey of switchgrass genome structure and organization.
|
PLoS One
|
2012
|
1.03
|
|
42
|
Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).
|
Plant J
|
2013
|
1.02
|
|
43
|
Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm.
|
Proc Natl Acad Sci U S A
|
2013
|
1.02
|
|
44
|
Elucidation of XA21-mediated innate immunity.
|
Cell Microbiol
|
2010
|
1.01
|
|
45
|
Ectopic expression of rice Xa21 overcomes developmentally controlled resistance to Xanthomonas oryzae pv. oryzae.
|
Plant Sci
|
2010
|
1.01
|
|
46
|
Genetic and biotechnological approaches for biofuel crop improvement.
|
Curr Opin Biotechnol
|
2010
|
1.00
|
|
47
|
Secretion, modification, and regulation of Ax21.
|
Curr Opin Microbiol
|
2011
|
0.98
|
|
48
|
Identification and functional analysis of light-responsive unique genes and gene family members in rice.
|
PLoS Genet
|
2008
|
0.96
|
|
49
|
The Rice Kinase Phylogenomics Database: a guide for systematic analysis of the rice kinase super-family.
|
Trends Plant Sci
|
2010
|
0.95
|
|
50
|
Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae.
|
Plant J
|
2005
|
0.95
|
|
51
|
Rice Snl6, a cinnamoyl-CoA reductase-like gene family member, is required for NH1-mediated immunity to Xanthomonas oryzae pv. oryzae.
|
PLoS Genet
|
2010
|
0.95
|
|
52
|
Enhanced disease resistance and hypersensitivity to BTH by introduction of an NH1/OsNPR1 paralog.
|
Plant Biotechnol J
|
2011
|
0.94
|
|
53
|
OsWRKY IIa Transcription Factors Modulate Rice Innate Immunity.
|
Rice (N Y)
|
2010
|
0.94
|
|
54
|
Three Novel Rice Genes Closely Related to the Arabidopsis IRX9, IRX9L, and IRX14 Genes and Their Roles in Xylan Biosynthesis.
|
Front Plant Sci
|
2013
|
0.92
|
|
55
|
Protein phosphorylation in plant immunity: insights into the regulation of pattern recognition receptor-mediated signaling.
|
Front Plant Sci
|
2012
|
0.90
|
|
56
|
Retracted
Small protein-mediated quorum sensing in a Gram-negative bacterium.
|
PLoS One
|
2011
|
0.90
|
|
57
|
Comparative analysis of protein-protein interactions in the defense response of rice and wheat.
|
BMC Genomics
|
2013
|
0.89
|
|
58
|
Direct calibration of PICKY-designed microarrays.
|
BMC Bioinformatics
|
2009
|
0.88
|
|
59
|
Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification.
|
Mol Plant
|
2012
|
0.85
|
|
60
|
FLS2-mediated responses to Ax21-derived peptides: response to the Mueller et al. commentary.
|
Plant Cell
|
2012
|
0.84
|
|
61
|
The plant glycosyltransferase clone collection for functional genomics.
|
Plant J
|
2014
|
0.84
|
|
62
|
Combining multivariate analysis and monosaccharide composition modeling to identify plant cell wall variations by Fourier Transform Near Infrared spectroscopy.
|
Plant Methods
|
2011
|
0.83
|
|
63
|
Construction of a rice glycoside hydrolase phylogenomic database and identification of targets for biofuel research.
|
Front Plant Sci
|
2013
|
0.82
|
|
64
|
Retraction. A type I-secreted, sulfated peptide triggers XA21-mediated innate immunity.
|
Science
|
2013
|
0.82
|
|
65
|
An efficient method for visualization and growth of fluorescent Xanthomonas oryzae pv. oryzae in planta.
|
BMC Microbiol
|
2008
|
0.82
|
|
66
|
Transcriptional dynamics during cell wall removal and regeneration reveals key genes involved in cell wall development in rice.
|
Plant Mol Biol
|
2011
|
0.81
|
|
67
|
Identification of a host 14-3-3 Protein that Interacts with Xanthomonas effector AvrRxv.
|
Physiol Mol Plant Pathol
|
2008
|
0.81
|
|
68
|
The endoplasmic reticulum-quality control component SDF2 is essential for XA21-mediated immunity in rice.
|
Plant Sci
|
2013
|
0.80
|
|
69
|
Strong suppression of systemic acquired resistance in Arabidopsis by NRR is dependent on its ability to interact with NPR1 and its putative repression domain.
|
Mol Plant
|
2008
|
0.79
|
|
70
|
Reduced expression of glycolate oxidase leads to enhanced disease resistance in rice.
|
PeerJ
|
2013
|
0.79
|
|
71
|
Marker-exchange mutagenesis and complementation strategies for the Gram-negative bacteria Xanthomonas oryzae pv. oryzae.
|
Methods Mol Biol
|
2007
|
0.79
|
|
72
|
A comparative approach expands the protein-protein interaction node of the immune receptor XA21 in wheat and rice.
|
Genome
|
2013
|
0.78
|
|
73
|
Yeast two-hybrid approaches to dissecting the plant defense response.
|
Methods Mol Biol
|
2007
|
0.77
|
|
74
|
Use of Nipponbare BAC clones for physical mapping of an R gene locus in rice.
|
Methods Mol Biol
|
2007
|
0.77
|
|
75
|
Differential requirement of Oryza sativa RAR1 in immune receptor-mediated resistance of rice to Magnaporthe oryzae.
|
Mol Cells
|
2013
|
0.77
|
|
76
|
A second-generation expression system for tyrosine-sulfated proteins and its application in crop protection.
|
Integr Biol (Camb)
|
2015
|
0.76
|
|
77
|
Front-runners in plant-microbe interactions.
|
Curr Opin Plant Biol
|
2012
|
0.76
|
|
78
|
Correction: A Genetic Screen Identifies a Requirement for Cysteine-Rich-Receptor-Like Kinases in Rice NH1 (OsNPR1)-Mediated Immunity.
|
PLoS Genet
|
2016
|
0.75
|
|
79
|
Phylogenomics databases for facilitating functional genomics in rice.
|
Rice (N Y)
|
2015
|
0.75
|
|
80
|
Correction: Transgenic expression of the dicotyledonous pattern recognition receptor EFR in rice leads to ligand-dependent activation of defense responses.
|
PLoS Pathog
|
2015
|
0.75
|
|
81
|
Transcriptome profiling analysis using rice oligonucleotide microarrays.
|
Methods Mol Biol
|
2013
|
0.75
|