Judith A Blake

Author PubWeight™ 114.89‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 The Mouse Genome Database (MGD): mouse biology and model systems. Nucleic Acids Res 2007 9.75
2 The Mouse Genome Database (MGD): integrating biology with the genome. Nucleic Acids Res 2004 8.91
3 The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology. Nucleic Acids Res 2005 8.19
4 The mouse Gene Expression Database (GXD): updates and enhancements. Nucleic Acids Res 2004 7.26
5 A promoter-level mammalian expression atlas. Nature 2014 6.25
6 Extension and integration of the gene ontology (GO): combining GO vocabularies with external vocabularies. Genome Res 2002 5.67
7 The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. Nucleic Acids Res 2011 5.60
8 A critical assessment of Mus musculus gene function prediction using integrated genomic evidence. Genome Biol 2008 4.78
9 The mouse genome database (MGD): new features facilitating a model system. Nucleic Acids Res 2006 4.52
10 The Protein Ontology: a structured representation of protein forms and complexes. Nucleic Acids Res 2010 3.74
11 Logical development of the cell ontology. BMC Bioinformatics 2011 3.68
12 Gene Ontology annotations: what they mean and where they come from. BMC Bioinformatics 2008 2.84
13 Rules and guidelines for mouse gene, allele, and mutation nomenclature: a condensed version. Genomics 2002 2.72
14 Connecting sequence and biology in the laboratory mouse. Genome Res 2003 2.69
15 The Mouse Genome Database: enhancements and updates. Nucleic Acids Res 2009 2.44
16 Ontology engineering. Nat Biotechnol 2010 2.24
17 A procedure for assessing GO annotation consistency. Bioinformatics 2005 2.11
18 Ontology development for biological systems: immunology. Bioinformatics 2007 2.03
19 The mouse genome database: genotypes, phenotypes, and models of human disease. Nucleic Acids Res 2012 1.98
20 Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res 2010 1.97
21 Concept annotation in the CRAFT corpus. BMC Bioinformatics 2012 1.94
22 On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report. PLoS Comput Biol 2012 1.65
23 Ontological visualization of protein-protein interactions. BMC Bioinformatics 2005 1.56
24 Hematopoietic cell types: prototype for a revised cell ontology. J Biomed Inform 2010 1.48
25 A method for increasing expressivity of Gene Ontology annotations using a compositional approach. BMC Bioinformatics 2014 1.48
26 Protein Ontology: a controlled structured network of protein entities. Nucleic Acids Res 2013 1.33
27 Towards BioDBcore: a community-defined information specification for biological databases. Database (Oxford) 2011 1.24
28 Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort. Database (Oxford) 2013 1.24
29 DFLAT: functional annotation for human development. BMC Bioinformatics 2014 1.17
30 Providing the missing link: the exposure science ontology ExO. Environ Sci Technol 2012 1.14
31 Mouse genome informatics (MGI) resources for pathology and toxicology. Toxicol Pathol 2007 1.12
32 An en masse phenotype and function prediction system for Mus musculus. Genome Biol 2008 1.06
33 Manual Gene Ontology annotation workflow at the Mouse Genome Informatics Database. Database (Oxford) 2012 1.03
34 Disease model curation improvements at Mouse Genome Informatics. Database (Oxford) 2012 1.02
35 The representation of protein complexes in the Protein Ontology (PRO). BMC Bioinformatics 2011 0.95
36 Autism candidate genes via mouse phenomics. J Biomed Inform 2011 0.93
37 Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference. Database (Oxford) 2012 0.89
38 TGF-beta signaling proteins and the Protein Ontology. BMC Bioinformatics 2009 0.86
39 Access to immunology through the Gene Ontology. Immunology 2008 0.85
40 Mouse Genome Informatics (MGI): reflecting on 25 years. Mamm Genome 2015 0.81
41 A Resource of Quantitative Functional Annotation for Homo sapiens Genes. G3 (Bethesda) 2012 0.80
42 Human disease genes and their cloned mouse orthologs: exploration of the FANTOM2 cDNA sequence data set. Genome Res 2003 0.80
43 Orthology for comparative genomics in the mouse genome database. Mamm Genome 2015 0.80
44 Ontology based molecular signatures for immune cell types via gene expression analysis. BMC Bioinformatics 2013 0.77
45 Corralling conditional mutations: a unified resource for mouse phenotypes. Genesis 2002 0.76