Constructing Physical and Genomic Maps for Puccinia striiformis f. sp. tritici, the Wheat Stripe Rust Pathogen, by Comparing Its EST Sequences to the Genomic Sequence of P. graminis f. sp. tritici, the Wheat Stem Rust Pathogen.

PubWeight™: 0.75‹?›

🔗 View Article (PMC 2821759)

Published in Comp Funct Genomics on February 11, 2010

Authors

Jinbiao Ma1, Xianming Chen, Meinan Wang, Zhensheng Kang

Author Affiliations

1: College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China.

Articles cited by this

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

A physical map of 30,000 human genes. Science (1998) 12.43

A physical map of the human genome. Nature (2001) 12.39

Lengths of chromosomal segments conserved since divergence of man and mouse. Proc Natl Acad Sci U S A (1984) 6.26

A physical map of the mouse genome. Nature (2002) 4.97

A genome-wide survey of human pseudogenes. Genome Res (2003) 4.34

Vertebrate pseudogenes. FEBS Lett (2000) 3.93

Comparative genomics of plant chromosomes. Plant Cell (2000) 3.21

A consensus linkage map of the chicken genome. Genome Res (2000) 2.79

Haustorially expressed secreted proteins from flax rust are highly enriched for avirulence elicitors. Plant Cell (2005) 2.70

Comparative genome analysis of filamentous fungi reveals gene family expansions associated with fungal pathogenesis. PLoS One (2008) 1.68

A YAC-based physical map of the mouse genome. Nat Genet (1999) 1.22

Stage-specific gene expression during urediniospore germination in Puccinia striiformis f. sp tritici. BMC Genomics (2008) 1.14

Generation and analysis of expression sequence tags from haustoria of the wheat stripe rust fungus Puccinia striiformis f. sp. Tritici. BMC Genomics (2009) 1.06

Microarray analysis of expressed sequence tags from haustoria of the rust fungus Uromyces fabae. Fungal Genet Biol (2005) 1.05

Construction and characterization of a full-length cDNA library for the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici). BMC Genomics (2007) 1.04

In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists. Bioinformatics (2007) 1.00

Comparative genomics of phylogenetically diverse unicellular eukaryotes provide new insights into the genetic basis for the evolution of the programmed cell death machinery. J Mol Evol (2009) 0.99

Comparative genomics of Arabidopsis and maize: prospects and limitations. Genome Biol (2002) 0.95

Comparative mapping of chicken anchor loci orthologous to genes on human chromosomes 1, 4 and 9. Anim Genet (2001) 0.89

Comparative genomic analysis of phytopathogenic fungi using expressed sequence tag (EST) collections. Mol Plant Pathol (2006) 0.89

Exon size distribution and the origin of introns. Genetica (2007) 0.86

Comparative plant genomics. Frontiers and prospects. Plant Physiol (2005) 0.85

Multiple features contribute to efficient constitutive splicing of an unusually large exon. Nucleic Acids Res (2001) 0.84

Construction of a hexaploid wheat (Triticum aestivum L.) bacterial artificial chromosome library for cloning genes for stripe rust resistance. Genome (2005) 0.84

Articles by these authors

A kinase-START gene confers temperature-dependent resistance to wheat stripe rust. Science (2009) 2.76

A rat model of chronic kidney disease-mineral bone disorder. Kidney Int (2008) 1.45

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors. BMC Genomics (2013) 1.37

High-temperature adult-plant (HTAP) stripe rust resistance gene Yr36 from Triticum turgidum ssp. dicoccoides is closely linked to the grain protein content locus Gpc-B1. Theor Appl Genet (2005) 1.35

Next generation sequencing provides rapid access to the genome of Puccinia striiformis f. sp. tritici, the causal agent of wheat stripe rust. PLoS One (2011) 1.33

Functional analysis of the kinome of the wheat scab fungus Fusarium graminearum. PLoS Pathog (2011) 1.31

Immunoregulatory role of B7-H1 in chronicity of inflammatory responses. Cell Mol Immunol (2006) 1.30

High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus. Nat Commun (2013) 1.28

Annexin-mediated matrix vesicle calcification in vascular smooth muscle cells. J Bone Miner Res (2008) 1.22

The pathophysiology of early-stage chronic kidney disease-mineral bone disorder (CKD-MBD) and response to phosphate binders in the rat. J Bone Miner Res (2011) 1.18

Stage-specific gene expression during urediniospore germination in Puccinia striiformis f. sp tritici. BMC Genomics (2008) 1.14

Generation and analysis of expression sequence tags from haustoria of the wheat stripe rust fungus Puccinia striiformis f. sp. Tritici. BMC Genomics (2009) 1.06

Transcriptome analysis of high-temperature adult-plant resistance conditioned by Yr39 during the wheat-Puccinia striiformis f. sp. tritici interaction. Mol Plant Pathol (2008) 1.06

Molecular analysis of common wheat genes encoding three types of cytosolic heat shock protein 90 (Hsp90): functional involvement of cytosolic Hsp90s in the control of wheat seedling growth and disease resistance. New Phytol (2011) 1.05

Fetuin-A uptake in bovine vascular smooth muscle cells is calcium dependent and mediated by annexins. Am J Physiol Renal Physiol (2006) 1.04

Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat. Theor Appl Genet (2011) 1.04

Construction and characterization of a full-length cDNA library for the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici). BMC Genomics (2007) 1.04

Transcriptome analysis of the wheat-Puccinia striiformis f. sp. tritici interaction. Mol Plant Pathol (2008) 1.03

Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array. BMC Genomics (2009) 1.02

Identification of a novel phosphorylation site, Ser-170, as a regulator of bad pro-apoptotic activity. J Biol Chem (2001) 1.02

Selection of suitable inner reference genes for relative quantification expression of microRNA in wheat. Plant Physiol Biochem (2011) 1.02

A secretory protein of necrotrophic fungus Sclerotinia sclerotiorum that suppresses host resistance. PLoS One (2013) 1.01

A comparison of calcium to zoledronic acid for improvement of cortical bone in an animal model of CKD. J Bone Miner Res (2014) 0.98

Identification of expressed genes during compatible interaction between stripe rust (Puccinia striiformis) and wheat using a cDNA library. BMC Genomics (2009) 0.98

R-568 reduces ectopic calcification in a rat model of chronic kidney disease-mineral bone disorder (CKD-MBD). Nephrol Dial Transplant (2009) 0.98

Surveying expression level polymorphism and single-feature polymorphism in near-isogenic wheat lines differing for the Yr5 stripe rust resistance locus. Theor Appl Genet (2008) 0.98

Decreased microRNA is involved in the vascular remodeling abnormalities in chronic kidney disease (CKD). PLoS One (2013) 0.97

Histological and cytological characterization of adult plant resistance to wheat stripe rust. Plant Cell Rep (2012) 0.96

cDNA-AFLP analysis reveals differential gene expression in compatible interaction of wheat challenged with Puccinia striiformis f. sp. tritici. BMC Genomics (2009) 0.95

Rapid and targeted introgression of genes into popular wheat cultivars using marker-assisted background selection. PLoS One (2009) 0.95

Wheat stripe (yellow) rust caused by Puccinia striiformis f. sp. tritici. Mol Plant Pathol (2014) 0.95

A novel protein Com1 is required for normal conidium morphology and full virulence in Magnaporthe oryzae. Mol Plant Microbe Interact (2010) 0.95

QTL mapping for adult-plant resistance to stripe rust in Italian common wheat cultivars Libellula and Strampelli. Theor Appl Genet (2009) 0.94

The HDF1 histone deacetylase gene is important for conidiation, sexual reproduction, and pathogenesis in Fusarium graminearum. Mol Plant Microbe Interact (2011) 0.94

Transducin beta-like gene FTL1 is essential for pathogenesis in Fusarium graminearum. Eukaryot Cell (2009) 0.94

Differential gene expression in incompatible interaction between wheat and stripe rust fungus revealed by cDNA-AFLP and comparison to compatible interaction. BMC Plant Biol (2010) 0.93

Characterization of non-host resistance in broad bean to the wheat stripe rust pathogen. BMC Plant Biol (2012) 0.93

TLR4 promotes Cryptosporidium parvum clearance in a mouse model of biliary cryptosporidiosis. J Parasitol (2011) 0.93

Re-evaluation of pathogens causing Valsa canker on apple in China. Mycologia (2010) 0.91

Cloning and characterization of a wheat beta-1,3-glucanase gene induced by the stripe rust pathogen Puccinia striiformis f. sp. tritici. Mol Biol Rep (2010) 0.91

Histological and molecular studies of the non-host interaction between wheat and Uromyces fabae. Planta (2011) 0.91

Fine mapping of wheat stripe rust resistance gene Yr26 based on collinearity of wheat with Brachypodium distachyon and rice. PLoS One (2013) 0.91

Validation of reference genes for gene expression analysis in Valsa mali var. mali using real-time quantitative PCR. World J Microbiol Biotechnol (2013) 0.91

Optimization of the fermentation process of actinomycete strain hhs.015. J Biomed Biotechnol (2010) 0.89

TaMCA4, a novel wheat metacaspase gene functions in programmed cell death induced by the fungal pathogen Puccinia striiformis f. sp. tritici. Mol Plant Microbe Interact (2012) 0.88

Genetic analysis of adult plant, quantitative resistance to stripe rust in wheat cultivar 'Stephens' in multi-environment trials. Theor Appl Genet (2011) 0.88

Rust secreted protein Ps87 is conserved in diverse fungal pathogens and contains a RXLR-like motif sufficient for translocation into plant cells. PLoS One (2011) 0.88

Activation of arterial matrix metalloproteinases leads to vascular calcification in chronic kidney disease. Am J Nephrol (2011) 0.88

Characterization of a pathogenesis-related thaumatin-like protein gene TaPR5 from wheat induced by stripe rust fungus. Physiol Plant (2009) 0.87

Transglutaminase 2 accelerates vascular calcification in chronic kidney disease. Am J Nephrol (2013) 0.87

Wheat defense genes in fungal (Puccinia striiformis) infection. Funct Integr Genomics (2010) 0.87

Identification of eighteen Berberis species as alternate hosts of Puccinia striiformis f. sp. tritici and virulence variation in the pathogen isolates from natural infection of barberry plants in China. Phytopathology (2013) 0.87

Wheat BAX inhibitor-1 contributes to wheat resistance to Puccinia striiformis. J Exp Bot (2012) 0.86

Verapamil inhibits calcification and matrix vesicle activity of bovine vascular smooth muscle cells. Kidney Int (2009) 0.86

A cation/proton-exchanging protein is a candidate for the barley NecS1 gene controlling necrosis and enhanced defense response to stem rust. Theor Appl Genet (2008) 0.86

The target gene of tae-miR164, a novel NAC transcription factor from the NAM subfamily, negatively regulates resistance of wheat to stripe rust. Mol Plant Pathol (2014) 0.85

Meta-analysis of transcripts associated with race-specific resistance to stripe rust in wheat demonstrates common induction of blue copper-binding protein, heat-stress transcription factor, pathogen-induced WIR1A protein, and ent-kaurene synthase transcripts. Funct Integr Genomics (2009) 0.85

Potential oversummering and overwintering regions for the wheat stripe rust pathogen in the contiguous United States. Int J Biometeorol (2013) 0.85

[Development of genetic transformation system of Valsa mali of apple mediated by PEG]. Wei Sheng Wu Xue Bao (2011) 0.85

TaADF7, an actin-depolymerizing factor, contributes to wheat resistance against Puccinia striiformis f. sp. tritici. Plant J (2014) 0.84

NF-(kappa)B mediates amyloid beta peptide-stimulated activity of the human apolipoprotein E gene promoter in human astroglial cells. Brain Res Mol Brain Res (2005) 0.84

[Endophytic bacteria isolated from wheat and their antifungal activities to soil-borne disease pathogens]. Ying Yong Sheng Tai Xue Bao (2006) 0.84

Comparative virulence phenotypes and molecular genotypes of Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen in China and the United States. Fungal Biol (2012) 0.84

A novel TaMYB4 transcription factor involved in the defence response against Puccinia striiformis f. sp. tritici and abiotic stresses. Plant Mol Biol (2013) 0.83

Functions of the lethal leaf-spot 1 gene in wheat cell death and disease tolerance to Puccinia striiformis. J Exp Bot (2013) 0.83

Molecular structure and organization of the wheat genomic manganese superoxide dismutase gene. Genome (2006) 0.83

Quetiapine-related tic in a pediatric bipolar patient. J Child Adolesc Psychopharmacol (2014) 0.83

RhoA/Rho kinase (ROCK) alters fetuin-A uptake and regulates calcification in bovine vascular smooth muscle cells (BVSMC). Am J Physiol Renal Physiol (2010) 0.83

Glycerol-3-phosphate metabolism in wheat contributes to systemic acquired resistance against Puccinia striiformis f. sp. tritici. PLoS One (2013) 0.83

Calcimimetics inhibit renal pathology in rodent nephronophthisis. Kidney Int (2011) 0.83

Inheritance and molecular mapping of barley genes conferring resistance to wheat stripe rust. Phytopathology (2005) 0.82

Ginkgo biloba leaf extract improves the cognitive abilities of rats with D-galactose induced dementia. J Biomed Res (2012) 0.82

Cloning and characterization of a calcium binding EF-hand protein gene TaCab1 from wheat and its expression in response to Puccinia striiformis f. sp. tritici and abiotic stresses. Mol Biol Rep (2010) 0.82

Stem rust spores elicit rapid RPG1 phosphorylation. Mol Plant Microbe Interact (2010) 0.82

Mapping of Yr62 and a small-effect QTL for high-temperature adult-plant resistance to stripe rust in spring wheat PI 192252. Theor Appl Genet (2014) 0.82

TaDAD2, a negative regulator of programmed cell death, is important for the interaction between wheat and the stripe rust fungus. Mol Plant Microbe Interact (2011) 0.81

NF-kappaB mediates IL-1beta-induced synthesis/release of alpha2-macroglobulin in a human glial cell line. Brain Res Mol Brain Res (2002) 0.81

Long non-coding genes implicated in response to stripe rust pathogen stress in wheat (Triticum aestivum L.). Mol Biol Rep (2013) 0.81

Cytological and molecular characterization of non-host resistance in Arabidopsis thaliana against wheat stripe rust. Plant Physiol Biochem (2012) 0.81

Cloning and characterization of a wheat neutral ceramidase gene Ta-CDase. Mol Biol Rep (2010) 0.81

Wheat zinc finger protein TaLSD1, a negative regulator of programmed cell death, is involved in wheat resistance against stripe rust fungus. Plant Physiol Biochem (2013) 0.81