Published in Biophys J on March 03, 2010
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Dynamic light scattering and fluorescence study of the interaction between double-stranded DNA and poly(amido amine) dendrimers. Biomacromolecules (2007) 0.87
Dynamics of single DNA looping and cleavage by Sau3AI and effect of tension applied to the DNA. Biophys J (2006) 0.85
Amine terminated G-6 PAMAM dendrimer and its interaction with DNA probed by Hoechst 33258. Biophys Chem (2006) 0.80
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The binding avidity of a nanoparticle-based multivalent targeted drug delivery platform. Chem Biol (2007) 3.36
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Membrane thinning due to antimicrobial peptide binding: an atomic force microscopy study of MSI-78 in lipid bilayers. Biophys J (2005) 1.81
Direct observation of lipid bilayer disruption by poly(amidoamine) dendrimers. Chem Phys Lipids (2004) 1.42
Discovery of selective bioactive small molecules by targeting an RNA dynamic ensemble. Nat Chem Biol (2011) 1.31
A quantitative assessment of nanoparticle-ligand distributions: implications for targeted drug and imaging delivery in dendrimer conjugates. ACS Nano (2010) 1.29
Characterizing complex dynamics in the transactivation response element apical loop and motional correlations with the bulge by NMR, molecular dynamics, and mutagenesis. Biophys J (2008) 1.24
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Constructing RNA dynamical ensembles by combining MD and motionally decoupled NMR RDCs: new insights into RNA dynamics and adaptive ligand recognition. Nucleic Acids Res (2009) 1.21
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Isolation and characterization of dendrimers with precise numbers of functional groups. Chemistry (2010) 1.11
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A general method for constructing atomic-resolution RNA ensembles using NMR residual dipolar couplings: the basis for interhelical motions revealed. J Am Chem Soc (2013) 1.09
Closing the gap between interdisciplinary research and disciplinary teaching. ACS Chem Biol (2007) 1.06
Efficient in vitro siRNA delivery and intramuscular gene silencing using PEG-modified PAMAM dendrimers. Mol Pharm (2012) 1.06
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The implications of stochastic synthesis for the conjugation of functional groups to nanoparticles. Bioconjug Chem (2008) 1.00
An improved method for nonbonded list generation: rapid determination of near-neighbor pairs. J Comput Chem (2003) 1.00
Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial pore. J Mol Biol (2005) 0.99
Type I collagen D-spacing in fibril bundles of dermis, tendon, and bone: bridging between nano- and micro-level tissue hierarchy. ACS Nano (2012) 0.99
Best practices for purification and characterization of PAMAM dendrimer. Macromolecules (2012) 0.98
Exact low-force kinetics from high-force single-molecule unfolding events. Biophys J (2007) 0.97
Nanoscale structure of type I collagen fibrils: quantitative measurement of D-spacing. Biotechnol J (2012) 0.96
On structural transitions, thermodynamic equilibrium, and the phase diagram of DNA and RNA duplexes under torque and tension. Proc Natl Acad Sci U S A (2006) 0.95
Time-resolved spectroscopic studies of B(12) coenzymes: a comparison of the primary photolysis mechanism in methyl-, ethyl-, n-propyl-, and 5'-deoxyadenosylcobalamin. J Am Chem Soc (2002) 0.93
Atomic force microscopy study of early morphological changes during apoptosis. Langmuir (2005) 0.93
Utility of 1H NMR chemical shifts in determining RNA structure and dynamics. J Phys Chem B (2013) 0.93
Rotation of DNA around intact strand in human topoisomerase I implies distinct mechanisms for positive and negative supercoil relaxation. Nucleic Acids Res (2005) 0.93
Probing sequence-specific DNA flexibility in a-tracts and pyrimidine-purine steps by nuclear magnetic resonance (13)C relaxation and molecular dynamics simulations. Biochemistry (2012) 0.93
Development of a remanence measurement-based SQUID system with in-depth resolution for nanoparticle imaging. Phys Med Biol (2009) 0.93
Constructing atomic-resolution RNA structural ensembles using MD and motionally decoupled NMR RDCs. Methods (2009) 0.92
Dendrimer-based multivalent methotrexates as dual acting nanoconjugates for cancer cell targeting. Eur J Med Chem (2011) 0.91
Bifunctional PAMAM dendrimer conjugates of folic acid and methotrexate with defined ratio. Biomacromolecules (2012) 0.90
Free energy calculations reveal rotating-ratchet mechanism for DNA supercoil relaxation by topoisomerase IB and its inhibition. Biophys J (2010) 0.90
Stoichiometry and Structure of Poly(amidoamine) Dendrimer-Lipid Complexes. ACS Nano (2009) 0.90
A skewed-momenta method to efficiently generate conformational-transition trajectories. J Chem Phys (2005) 0.89
RGD dendron bodies; synthetic avidity agents with defined and potentially interchangeable effector sites that can substitute for antibodies. Bioconjug Chem (2009) 0.89
Isolation and characterization of precise dye/dendrimer ratios. Chemistry (2014) 0.88
PAMAM Dendrimers as Quantized Building Blocks for Novel Nanostructures. Soft Matter (2013) 0.88
A multiscale dynamic model of DNA supercoil relaxation by topoisomerase IB. Biophys J (2011) 0.88
Cell volume changes during apoptosis monitored in real time using digital holographic microscopy. J Struct Biol (2012) 0.88
Avidity modulation of folate-targeted multivalent dendrimers for evaluating biophysical models of cancer targeting nanoparticles. ACS Chem Biol (2013) 0.87
Avidity mechanism of dendrimer-folic acid conjugates. Mol Pharm (2014) 0.86
Bioanalytical Screening of Riboflavin Antagonists for Targeted Drug Delivery - A Thermodynamic and Kinetic Study. ACS Med Chem Lett (2011) 0.86
Design, synthesis, and biological functionality of a dendrimer-based modular drug delivery platform. Bioconjug Chem (2011) 0.86
Structural ensemble and dynamics of toroidal-like DNA shapes in bacteriophage ϕ29 exit cavity. Biophys J (2013) 0.86
Origin of broad polydispersion in functionalized dendrimers and its effects on cancer-cell binding affinity. Phys Rev E Stat Nonlin Soft Matter Phys (2010) 0.85
Entropy-energy decomposition from nonequilibrium work trajectories. J Chem Phys (2008) 0.84
Interactions of poly(amidoamine) dendrimers with Survanta lung surfactant: the importance of lipid domains. Langmuir (2008) 0.84
A Facile Hydrothermal Synthesis of Iron Oxide Nanoparticles with Tunable Magnetic Properties. J Phys Chem C Nanomater Interfaces (2009) 0.84
The severity of osteogenesis imperfecta: a comparison to the relative free energy differences of collagen model peptides. Biopolymers (2011) 0.83
Fluorophore:dendrimer ratio impacts cellular uptake and intracellular fluorescence lifetime. Bioconjug Chem (2015) 0.82
Solid-state NMR reveals the hydrophobic-core location of poly(amidoamine) dendrimers in biomembranes. J Am Chem Soc (2010) 0.82
Surface orientation of magainin 2: molecular dynamics simulation and sum frequency generation vibrational spectroscopic studies. Langmuir (2010) 0.81
Pulsed-laser creation and characterization of giant plasma membrane vesicles from cells. J Biol Phys (2009) 0.81
Polyplex-induced cytosolic nuclease activation leads to differential transgene expression. Mol Pharm (2013) 0.81
Diffusion NMR study of generation-five PAMAM dendrimer materials. J Phys Chem B (2014) 0.81
Referencing strategy for the direct comparison of nuclear magnetic resonance and molecular dynamics motional parameters in RNA. J Phys Chem B (2010) 0.81
On the calculation of time correlation functions by potential scaling. J Chem Phys (2006) 0.81
Multivalent polymers for drug delivery and imaging: the challenges of conjugation. Biomacromolecules (2014) 0.80
Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory. J Membr Biol (2015) 0.79
Intrinsic dynamics of DNA-polymer complexes: a mechanism for DNA release. Mol Pharm (2012) 0.79
Directionally negative friction: a method for enhanced sampling of rare event kinetics. J Chem Phys (2008) 0.79
Hyperspectral imaging and characterization of live cells by broadband coherent anti-Stokes Raman scattering (CARS) microscopy with singular value decomposition (SVD) analysis. Appl Spectrosc (2014) 0.79
Polyplex exposure inhibits cell cycle, increases inflammatory response, and can cause protein expression without cell division. Mol Pharm (2013) 0.79
Parameterization of peptide 13C carbonyl chemical shielding anisotropy in molecular dynamics simulations. Chemphyschem (2007) 0.78
Biophysical characterization of a riboflavin-conjugated dendrimer platform for targeted drug delivery. Biomacromolecules (2012) 0.78
An experimentally guided umbrella sampling protocol for biomolecules. J Chem Phys (2008) 0.78
Attractive hydration forces in DNA-dendrimer interactions on the nanometer scale. J Phys Chem B (2013) 0.77
Poly(amidoamine) dendrimer-methotrexate conjugates: the mechanism of interaction with folate binding protein. Mol Pharm (2014) 0.77
Conformational and solvent entropy contributions to the thermal response of nucleic acid-based nanothermometers. J Phys Chem B (2010) 0.77
Formation of alkylsilane-based monolayers on gold. J Am Chem Soc (2002) 0.77
Interfacial orientation and secondary structure change in tachyplesin I: molecular dynamics and sum frequency generation spectroscopy studies. Langmuir (2011) 0.77
C-H activation of ethers and alkanes by germylene-aryl halide complexes. J Am Chem Soc (2003) 0.77
Detergent induction of HEK 293A cell membrane permeability measured under quiescent and superfusion conditions using whole cell patch clamp. J Phys Chem B (2014) 0.76
Role of microscopic flexibility in tightly curved DNA. J Phys Chem B (2014) 0.76
Similarities between protein folding and granular jamming. Nat Commun (2012) 0.76
A comparative study on the ability of two implicit solvent lipid models to predict transmembrane helix tilt angles. J Membr Biol (2010) 0.76
Simulations of Two-dimensional Infrared and Stimulated Resonance Raman Spectra of Photoactive Yellow Protein. Chem Phys (2013) 0.75
Characterization of Folic Acid and Poly(amidoamine) Dendrimer Interactions with Folate Binding Protein: A Force-Pulling Study. J Phys Chem B (2015) 0.75
Energy landscape for DNA rotation and sliding through a phage portal. Biophys J (2009) 0.75
Oral absorption enhancement of probucol by PEGylated G5 PAMAM dendrimer modified nanoliposomes. Mol Pharm (2015) 0.75
Quantification of cytosolic plasmid DNA degradation using high-throughput sequencing: implications for gene delivery. J Gene Med (2014) 0.75
Formation of mixed monolayers of silsesquioxanes and alkylsilanes on gold. Langmuir (2006) 0.75
Synthesis of a digermane-containing tricylic nonadecadienedione incorporating an equivalent of ring-opened THF. Inorg Chem (2004) 0.75
Reconstructing equilibrium entropy and enthalpy profiles from non-equilibrium pulling. J Chem Phys (2013) 0.75
Octylgermane on gold: synthesis, oxidation, and pattern formation. Langmuir (2004) 0.75
Reactions of palladium germylene complexes: formation of sulfide bridges. Inorg Chem (2003) 0.75