PubRank

Aleksey Y Ogurtsov

Author PubWeight™ 28.21‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 A periodic pattern of mRNA secondary structure created by the genetic code. Nucleic Acids Res 2006 2.24
2 Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites. J Theor Biol 2005 1.88
3 Computational models with thermodynamic and composition features improve siRNA design. BMC Bioinformatics 2006 1.69
4 Comparison of approaches for rational siRNA design leading to a new efficient and transparent method. Nucleic Acids Res 2007 1.68
5 Expansion of the human mu-opioid receptor gene architecture: novel functional variants. Hum Mol Genet 2008 1.59
6 Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals. Nucleic Acids Res 2004 1.49
7 Calibrating E-values for MS2 database search methods. Biol Direct 2007 1.44
8 Positive selection at sites of multiple amino acid replacements since rat-mouse divergence. Nature 2004 1.40
9 Evolution of alternative and constitutive regions of mammalian 5'UTRs. BMC Genomics 2009 1.31
10 RAId_DbS: peptide identification using database searches with realistic statistics. Biol Direct 2007 1.27
11 Bioinformatical assay of human gene morbidity. Nucleic Acids Res 2004 1.23
12 Widespread positive selection in synonymous sites of mammalian genes. Mol Biol Evol 2007 1.17
13 Distinct patterns of expression and evolution of intronless and intron-containing mammalian genes. Mol Biol Evol 2010 1.11
14 Optimization of duplex stability and terminal asymmetry for shRNA design. PLoS One 2010 1.05
15 Distant conserved sequences flanking endothelial-specific promoters contain tissue-specific DNase-hypersensitive sites and over-represented motifs. Hum Mol Genet 2006 1.00
16 Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3'UTRs. Nucleic Acids Res 2003 0.96
17 RAId_DbS: mass-spectrometry based peptide identification web server with knowledge integration. BMC Genomics 2008 0.95
18 RAId_aPS: MS/MS analysis with multiple scoring functions and spectrum-specific statistics. PLoS One 2010 0.89
19 Optimized models for design of efficient miR30-based shRNAs. Front Genet 2012 0.86
20 Detection of co-eluted peptides using database search methods. Biol Direct 2008 0.86
21 Assigning statistical significance to proteotypic peptides via database searches. J Proteomics 2010 0.80
22 A hierarchical approach to aligning collinear regions of genomes. Bioinformatics 2002 0.78
23 Molecular Isotopic Distribution Analysis (MIDAs) with adjustable mass accuracy. J Am Soc Mass Spectrom 2013 0.75