Published in Genome Biol on May 19, 2010
Epithelial-connective tissue interactions induced by thyroid hormone receptor are essential for adult stem cell development in the Xenopus laevis intestine. Stem Cells (2011) 1.01
Evolutionary insights into postembryonic development of adult intestinal stem cells. Cell Biosci (2011) 1.00
Research proceedings on amphibian model organisms. Dongwuxue Yanjiu (2016) 0.97
Thyroid hormone-induced cell-cell interactions are required for the development of adult intestinal stem cells. Cell Biosci (2013) 0.95
Proteomic profiling of cardiac tissue by isolation of nuclei tagged in specific cell types (INTACT). Development (2014) 0.92
Thyroid hormone regulation of adult intestinal stem cell development: mechanisms and evolutionary conservations. Int J Biol Sci (2012) 0.92
Expression profiling of intestinal tissues implicates tissue-specific genes and pathways essential for thyroid hormone-induced adult stem cell development. Endocrinology (2013) 0.85
Cytological and morphological analyses reveal distinct features of intestinal development during Xenopus tropicalis metamorphosis. PLoS One (2012) 0.84
The role of thyroid hormone signaling in the prevention of digestive system cancers. Int J Mol Sci (2013) 0.83
Differential regulation of two histidine ammonia-lyase genes during Xenopus development implicates distinct functions during thyroid hormone-induced formation of adult stem cells. Cell Biosci (2013) 0.81
Direct Activation of Amidohydrolase Domain-Containing 1 Gene by Thyroid Hormone Implicates a Role in the Formation of Adult Intestinal Stem Cells During Xenopus Metamorphosis. Endocrinology (2015) 0.79
Activation of Sox3 gene by thyroid hormone in the developing adult intestinal stem cell during Xenopus metamorphosis. Endocrinology (2014) 0.79
Microbiota and mucosal immunity in amphibians. Front Immunol (2015) 0.78
Thyroid hormone-regulated Wnt5a/Ror2 signaling is essential for dedifferentiation of larval epithelial cells into adult stem cells in the Xenopus laevis intestine. PLoS One (2014) 0.77
The Sox transcriptional factors: Functions during intestinal development in vertebrates. Semin Cell Dev Biol (2016) 0.77
A requirement for hedgehog signaling in thyroid hormone-induced postembryonic intestinal remodeling. Cell Biosci (2015) 0.77
Direct Regulation of Histidine Ammonia-Lyase 2 Gene by Thyroid Hormone in the Developing Adult Intestinal Stem Cells. Endocrinology (2017) 0.76
Tissue-specific upregulation of MDS/EVI gene transcripts in the intestine by thyroid hormone during Xenopus metamorphosis. PLoS One (2013) 0.76
Molecular and cytological analyses reveal distinct transformations of intestinal epithelial cells during Xenopus metamorphosis. Cell Biosci (2015) 0.76
A Mechanism to Enhance Cellular Responsivity to Hormone Action: Krüppel-Like Factor 9 Promotes Thyroid Hormone Receptor-β Autoinduction During Postembryonic Brain Development. Endocrinology (2016) 0.75
Ultrastructural and molecular changes in the developing small intestine of the toad Bufo regularis. ScientificWorldJournal (2014) 0.75
The transcriptome of metamorphosing flatfish. BMC Genomics (2016) 0.75
Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis. Sci Rep (2017) 0.75
TM4: a free, open-source system for microarray data management and analysis. Biotechniques (2003) 38.02
GoMiner: a resource for biological interpretation of genomic and proteomic data. Genome Biol (2003) 22.63
MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol (2003) 20.83
GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways. Nat Genet (2002) 14.69
Stem cells, self-renewal, and differentiation in the intestinal epithelium. Annu Rev Physiol (2009) 7.29
DFF, a heterodimeric protein that functions downstream of caspase-3 to trigger DNA fragmentation during apoptosis. Cell (1997) 5.95
Organizing cell renewal in the intestine: stem cells, signals and combinatorial control. Nat Rev Genet (2006) 4.82
Signaling pathways in intestinal development and cancer. Annu Rev Cell Dev Biol (2004) 4.00
Evolution of proteolytic enzymes. Science (1984) 3.57
A web-based tool for principal component and significance analysis of microarray data. Bioinformatics (2005) 3.42
Paneth cell trypsin is the processing enzyme for human defensin-5. Nat Immunol (2002) 3.13
Increased malignancy of Neu-induced mammary tumors overexpressing active transforming growth factor beta1. Mol Cell Biol (2003) 1.99
Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. III. Entero-endocrine cells. Am J Anat (1974) 1.95
Gene expression during metamorphosis: an ideal model for post-embryonic development. Bioessays (1993) 1.65
Human ATP-binding cassette (ABC) transporter family. Hum Genomics (2009) 1.61
Validating genetic risk associations for ovarian cancer through the international Ovarian Cancer Association Consortium. Br J Cancer (2009) 1.54
Biphasic intestinal development in amphibians: embryogenesis and remodeling during metamorphosis. Curr Top Dev Biol (1996) 1.52
Molecular and developmental analyses of thyroid hormone receptor function in Xenopus laevis, the African clawed frog. Gen Comp Endocrinol (2005) 1.46
Intestinal epithelial cell differentiation: new insights from mice, flies and nematodes. Curr Opin Genet Dev (1995) 1.33
A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development. Development (2006) 1.32
Remodeling of the intestine during metamorphosis of Xenopus laevis. Proc Natl Acad Sci U S A (2005) 1.29
Cloning and characterization of the ribosomal protein L8 gene from Xenopus laevis. Biochim Biophys Acta (1994) 1.22
Gene expression changes at metamorphosis induced by thyroid hormone in Xenopus laevis tadpoles. Dev Biol (2006) 1.20
Expression of trypsin by epithelial cells of various tissues, leukocytes, and neurons in human and mouse. Am J Pathol (1998) 1.17
Pairing morphology with gene expression in thyroid hormone-induced intestinal remodeling and identification of a core set of TH-induced genes across tadpole tissues. Dev Biol (2006) 1.09
Spatial and temporal expression profiles suggest the involvement of gelatinase A and membrane type 1 matrix metalloproteinase in amphibian metamorphosis. Cell Tissue Res (2006) 1.07
FACS-assisted microarray profiling implicates novel genes and pathways in zebrafish gastrointestinal tract development. Gastroenterology (2009) 1.04
C2GnT-M is downregulated in colorectal cancer and its re-expression causes growth inhibition of colon cancer cells. Oncogene (2006) 1.03
A causative role of stromelysin-3 in extracellular matrix remodeling and epithelial apoptosis during intestinal metamorphosis in Xenopus laevis. J Biol Chem (2005) 1.03
Development of the vertebrate small intestine and mechanisms of cell differentiation. Int J Dev Biol (1990) 1.00
The xenoestrogen bisphenol A inhibits postembryonic vertebrate development by antagonizing gene regulation by thyroid hormone. Endocrinology (2009) 0.98
Silencing of Lactotransferrin expression by methylation in prostate cancer progression. Cancer Biol Ther (2007) 0.92
Co-expression of cytokeratin 8 and breast cancer resistant protein indicates a multifactorial drug-resistant phenotype in human breast cancer cell line. Life Sci (2008) 0.87
Novel mutations of CYP3A4 in fine needle aspiration cytology samples of breast cancer patients and its clinical correlations. Cancer Biomark (2009) 0.85
Transformation by oncogenic Ras expands the early genomic response to transforming growth factor beta in intestinal epithelial cells. Neoplasia (2008) 0.78
Ras-mediated suppression of TGFbetaRII expression in intestinal epithelial cells involves Raf-independent signaling. Neoplasia (2001) 0.78
Control of amino-acid transport by antigen receptors coordinates the metabolic reprogramming essential for T cell differentiation. Nat Immunol (2013) 2.37
Molecular and developmental analyses of thyroid hormone receptor function in Xenopus laevis, the African clawed frog. Gen Comp Endocrinol (2005) 1.46
Recruitment of N-CoR/SMRT-TBLR1 corepressor complex by unliganded thyroid hormone receptor for gene repression during frog development. Mol Cell Biol (2004) 1.43
A dominant-negative thyroid hormone receptor blocks amphibian metamorphosis by retaining corepressors at target genes. Mol Cell Biol (2003) 1.30
Developmental plasticity mirrors differences among taxa in spadefoot toads linking plasticity and diversity. Proc Natl Acad Sci U S A (2006) 1.28
Unliganded thyroid hormone receptor α controls developmental timing in Xenopus tropicalis. Endocrinology (2014) 1.28
Nuclear receptor corepressor recruitment by unliganded thyroid hormone receptor in gene repression during Xenopus laevis development. Mol Cell Biol (2002) 1.26
Novel double promoter approach for identification of transgenic animals: A tool for in vivo analysis of gene function and development of gene-based therapies. Mol Reprod Dev (2002) 1.26
Transgenic analysis reveals that thyroid hormone receptor is sufficient to mediate the thyroid hormone signal in frog metamorphosis. Mol Cell Biol (2004) 1.25
Unliganded thyroid hormone receptor α regulates developmental timing via gene repression in Xenopus tropicalis. Endocrinology (2014) 1.24
Chromatin disruption and histone acetylation in regulation of the human immunodeficiency virus type 1 long terminal repeat by thyroid hormone receptor. Mol Cell Biol (2002) 1.24
Origin of the adult intestinal stem cells induced by thyroid hormone in Xenopus laevis. FASEB J (2009) 1.16
Cardiac hypertrophy: mechanisms and therapeutic opportunities. Antioxid Redox Signal (2007) 1.13
Phylogenetic relationships of Pelobatoidea re-examined using mtDNA. Mol Phylogenet Evol (2003) 1.12
Regulation of adult intestinal epithelial stem cell development by thyroid hormone during Xenopus laevis metamorphosis. Dev Dyn (2007) 1.09
Pairing morphology with gene expression in thyroid hormone-induced intestinal remodeling and identification of a core set of TH-induced genes across tadpole tissues. Dev Biol (2006) 1.09
Coactivator recruitment is essential for liganded thyroid hormone receptor to initiate amphibian metamorphosis. Mol Cell Biol (2005) 1.08
Gene-specific changes in promoter occupancy by thyroid hormone receptor during frog metamorphosis. Implications for developmental gene regulation. J Biol Chem (2005) 1.08
Spatial and temporal expression profiles suggest the involvement of gelatinase A and membrane type 1 matrix metalloproteinase in amphibian metamorphosis. Cell Tissue Res (2006) 1.07
An essential and evolutionarily conserved role of protein arginine methyltransferase 1 for adult intestinal stem cells during postembryonic development. Stem Cells (2010) 1.07
Tissue- and gene-specific recruitment of steroid receptor coactivator-3 by thyroid hormone receptor during development. J Biol Chem (2005) 1.06
Identification of direct thyroid hormone response genes reveals the earliest gene regulation programs during frog metamorphosis. J Biol Chem (2009) 1.05
Developmental regulation and function of thyroid hormone receptors and 9-cis retinoic acid receptors during Xenopus tropicalis metamorphosis. Endocrinology (2008) 1.04
Lifespan of effector memory CD4+ T cells determined by replication-incompetent integrated HIV-1 provirus. AIDS (2014) 1.03
A causative role of stromelysin-3 in extracellular matrix remodeling and epithelial apoptosis during intestinal metamorphosis in Xenopus laevis. J Biol Chem (2005) 1.03
Fusion protein of retinoic acid receptor alpha with promyelocytic leukemia protein or promyelocytic leukemia zinc finger protein recruits N-CoR-TBLR1 corepressor complex to repress transcription in vivo. J Biol Chem (2003) 1.03
A role of unliganded thyroid hormone receptor in postembryonic development in Xenopus laevis. Mech Dev (2007) 1.02
Epithelial-connective tissue interactions induced by thyroid hormone receptor are essential for adult stem cell development in the Xenopus laevis intestine. Stem Cells (2011) 1.01
SRC-p300 coactivator complex is required for thyroid hormone-induced amphibian metamorphosis. J Biol Chem (2007) 1.01
Thyroid hormone controls multiple independent programs required for limb development in Xenopus laevis metamorphosis. Proc Natl Acad Sci U S A (2005) 1.01
Emergence of a novel lineage genetically divergent from the predominant Ind2001 lineage of serotype O foot-and-mouth disease virus in India. Infect Genet Evol (2013) 1.00
Evolutionary insights into postembryonic development of adult intestinal stem cells. Cell Biosci (2011) 1.00
Activity of RBx 11760, a novel biaryl oxazolidinone, against Clostridium difficile. J Antimicrob Chemother (2011) 0.99
Novel functions of protein arginine methyltransferase 1 in thyroid hormone receptor-mediated transcription and in the regulation of metamorphic rate in Xenopus laevis. Mol Cell Biol (2008) 0.99
The xenoestrogen bisphenol A inhibits postembryonic vertebrate development by antagonizing gene regulation by thyroid hormone. Endocrinology (2009) 0.98
New oxorhenium(V) complexes with 2N2S donor sets and radiochemical behavior of their technetium analogs. Appl Radiat Isot (2004) 0.98
Gene expression atlas for human embryogenesis. FASEB J (2010) 0.98
Sequencing and characterization of the complete mitochondrial genomes of three Pneumocystis species provide new insights into divergence between human and rodent Pneumocystis. FASEB J (2013) 0.97
Synthesis and antibacterial activity of potent heterocyclic oxazolidinones and the identification of RBx 8700. Bioorg Med Chem Lett (2007) 0.97
Human T-cell leukemia virus type 1 oncoprotein tax represses ZNF268 expression through the cAMP-responsive element-binding protein/activating transcription factor pathway. J Biol Chem (2008) 0.95
Negative regulation of TSHalpha target gene by thyroid hormone involves histone acetylation and corepressor complex dissociation. Mol Endocrinol (2009) 0.95
Thyroid hormone-induced cell-cell interactions are required for the development of adult intestinal stem cells. Cell Biosci (2013) 0.95
Fluorescent-magnetic-biotargeting multifunctional nanobioprobes for detecting and isolating multiple types of tumor cells. ACS Nano (2011) 0.94
Thyroid hormone regulation of a transcriptional coactivator in Xenopus laevis: implication for a role in postembryonic tissue remodeling. Dev Dyn (2002) 0.94
Spatio-temporal expression profile of stem cell-associated gene LGR5 in the intestine during thyroid hormone-dependent metamorphosis in Xenopus laevis. PLoS One (2010) 0.94
Evidence for a cooperative role of gelatinase A and membrane type-1 matrix metalloproteinase during Xenopus laevis development. Mech Dev (2006) 0.94
Uniform fluorescent nanobioprobes for pathogen detection. ACS Nano (2014) 0.94
FOR, a novel orphan nuclear receptor related to farnesoid X receptor. J Biol Chem (2002) 0.93
Apoptosis in amphibian organs during metamorphosis. Apoptosis (2010) 0.93
Contrasting effects of two alternative splicing forms of coactivator-associated arginine methyltransferase 1 on thyroid hormone receptor-mediated transcription in Xenopus laevis. Mol Endocrinol (2007) 0.92
The matrix metalloproteinase stromelysin-3 cleaves laminin receptor at two distinct sites between the transmembrane domain and laminin binding sequence within the extracellular domain. Cell Res (2005) 0.92
Improved cre reporter transgenic Xenopus. Dev Dyn (2009) 0.92
Thyroid hormone regulation of adult intestinal stem cell development: mechanisms and evolutionary conservations. Int J Biol Sci (2012) 0.92
Liganded thyroid hormone receptor induces nucleosome removal and histone modifications to activate transcription during larval intestinal cell death and adult stem cell development. Endocrinology (2011) 0.90
Identification and developmental expression of Xenopus laevis SUMO proteases. PLoS One (2009) 0.90
Visual recognition and efficient isolation of apoptotic cells with fluorescent-magnetic-biotargeting multifunctional nanospheres. Clin Chem (2007) 0.90
Transcriptional regulation of the Xenopus laevis Stromelysin-3 gene by thyroid hormone is mediated by a DNA element in the first intron. J Biol Chem (2006) 0.90
Distinct expression profiles of transcriptional coactivators for thyroid hormone receptors during Xenopus laevis metamorphosis. Cell Res (2003) 0.89
Thyroid hormone activates protein arginine methyltransferase 1 expression by directly inducing c-Myc transcription during Xenopus intestinal stem cell development. J Biol Chem (2012) 0.89
Spatial and temporal expression pattern of a novel gene in the frog Xenopus laevis: correlations with adult intestinal epithelial differentiation during metamorphosis. Gene Expr Patterns (2004) 0.89
Thyroid hormone-up-regulated hedgehog interacting protein is involved in larval-to-adult intestinal remodeling by regulating sonic hedgehog signaling pathway in Xenopus laevis. Dev Dyn (2008) 0.88
Phylogenetic structure of serotype A foot-and-mouth disease virus: global diversity and the Indian perspective. J Gen Virol (2011) 0.87
Transcription of human zinc finger ZNF268 gene requires an intragenic promoter element. J Biol Chem (2006) 0.87
Short-chain fatty acids from periodontal pathogens suppress histone deacetylases, EZH2, and SUV39H1 to promote Kaposi's sarcoma-associated herpesvirus replication. J Virol (2014) 0.87
Mechanisms of thyroid hormone receptor action during development: lessons from amphibian studies. Biochim Biophys Acta (2012) 0.87
Late survival in Ellis-van Creveld syndrome - a case report. Indian Heart J (2012) 0.87
Impairment of ultrastructure and cytoskeleton during progression of cardiac hypertrophy to heart failure. Lab Invest (2010) 0.86
Participation of Brahma-related gene 1 (BRG1)-associated factor 57 and BRG1-containing chromatin remodeling complexes in thyroid hormone-dependent gene activation during vertebrate development. Mol Endocrinol (2008) 0.85
Expression profiling of intestinal tissues implicates tissue-specific genes and pathways essential for thyroid hormone-induced adult stem cell development. Endocrinology (2013) 0.85
Genome-wide identification of Xenopus matrix metalloproteinases: conservation and unique duplications in amphibians. BMC Genomics (2009) 0.85
Extracellular domain of CD98hc is required for early murine development. Cell Biosci (2011) 0.84
New doxycycline-inducible transgenic lines in Xenopus. Dev Dyn (2011) 0.84
Cytological and morphological analyses reveal distinct features of intestinal development during Xenopus tropicalis metamorphosis. PLoS One (2012) 0.84
Direct activation of Xenopus iodotyrosine deiodinase by thyroid hormone receptor in the remodeling intestine during amphibian metamorphosis. Endocrinology (2012) 0.83
Molecular mechanisms for thyroid hormone-induced remodeling in the amphibian digestive tract: a model for studying organ regeneration. Dev Growth Differ (2005) 0.83
Characterization of Xenopus tissue inhibitor of metalloproteinases-2: a role in regulating matrix metalloproteinase activity during development. PLoS One (2012) 0.82
Corticotropin-releasing factor regulates the development in the direct developing frog, Eleutherodactylus coqui. Gen Comp Endocrinol (2010) 0.82
Molecular and genetic studies suggest that thyroid hormone receptor is both necessary and sufficient to mediate the developmental effects of thyroid hormone. Gen Comp Endocrinol (2010) 0.81
Dichlorido[N-(2-pyridylmethyl-idene)benzene-1,4-diamine]zinc(II). Acta Crystallogr Sect E Struct Rep Online (2010) 0.81
Differential regulation of cell type-specific apoptosis by stromelysin-3: a potential mechanism via the cleavage of the laminin receptor during tail resorption in Xenopus laevis. J Biol Chem (2009) 0.81