Drosophila Gene Expression Pattern Annotation through Multi-Instance Multi-Label Learning.

Drosophila Gene Expression Pattern Annotation Using Sparse Features and Term-Term Interactions. KDD (2009) 1.45

Visualization and analysis of 3D microscopic images. PLoS Comput Biol (2012) 1.22

SPEX2: automated concise extraction of spatial gene expression patterns from Fly embryo ISH images. Bioinformatics (2010) 1.11

Learning sparse representations for fruit-fly gene expression pattern image annotation and retrieval. BMC Bioinformatics (2012) 0.86

Joint stage recognition and anatomical annotation of Drosophila gene expression patterns. Bioinformatics (2012) 0.77

Performance evaluation of local descriptors. IEEE Trans Pattern Anal Mach Intell (2005) 14.27

Systematic determination of patterns of gene expression during Drosophila embryogenesis. Genome Biol (2002) 8.89

BEST: a novel computational approach for comparing gene expression patterns from early stages of Drosophila melanogaster development. Genetics (2002) 2.43

Automatic recognition and annotation of gene expression patterns of fly embryos. Bioinformatics (2007) 2.25

Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant moment digital representations. BMC Bioinformatics (2004) 1.64

Automated annotation of Drosophila gene expression patterns using a controlled vocabulary. Bioinformatics (2008) 1.50

MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol (2007) 168.76

MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol (2013) 112.81

Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci U S A (2004) 20.53

Evolution of genes and genomes on the Drosophila phylogeny. Nature (2007) 18.01

Precision of molecular time estimates. Trends Genet (2004) 15.94

Estimating divergence times in large molecular phylogenies. Proc Natl Acad Sci U S A (2012) 13.49

TimeTree: a public knowledge-base of divergence times among organisms. Bioinformatics (2006) 10.24

Heterogeneity of nucleotide frequencies among evolutionary lineages and phylogenetic inference. Mol Biol Evol (2003) 7.78

Fast and slow implementations of relaxed-clock methods show similar patterns of accuracy in estimating divergence times. Mol Biol Evol (2011) 6.93

Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. Mol Biol Evol (2003) 5.30

Performance of relaxed-clock methods in estimating evolutionary divergence times and their credibility intervals. Mol Biol Evol (2010) 5.13

Evolutionary diagnosis method for variants in personal exomes. Nat Methods (2012) 3.32

Constraint and turnover in sex-biased gene expression in the genus Drosophila. Nature (2007) 3.04

Genomic clocks and evolutionary timescales. Trends Genet (2003) 2.83

Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome. Genetics (2004) 2.63

Exploratory undersampling for class-imbalance learning. IEEE Trans Syst Man Cybern B Cybern (2008) 2.29

Evolutionary distance estimation under heterogeneous substitution pattern among lineages. Mol Biol Evol (2002) 2.23

Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree. J Exp Zool B Mol Dev Evol (2005) 2.22

Learning brain connectivity of Alzheimer's disease by sparse inverse covariance estimation. Neuroimage (2010) 2.04

Tensor completion for estimating missing values in visual data. IEEE Trans Pattern Anal Mach Intell (2013) 2.04

Neutral substitutions occur at a faster rate in exons than in noncoding DNA in primate genomes. Genome Res (2003) 1.94

Isolation and characterization of cancer stem cells from a human glioblastoma cell line U87. Cancer Lett (2008) 1.93

Evolutionary anatomies of positions and types of disease-associated and neutral amino acid mutations in the human genome. BMC Genomics (2006) 1.87

Bone and Joint day - India. Indian J Orthop (2013) 1.84

Learning Incoherent Sparse and Low-Rank Patterns from Multiple Tasks. ACM Trans Knowl Discov Data (2012) 1.77

Nullomers: really a matter of natural selection? PLoS One (2007) 1.67

Multi-source feature learning for joint analysis of incomplete multiple heterogeneous neuroimaging data. Neuroimage (2012) 1.66

Clinical and laboratory features and response to treatment in patients presenting with vitamin B12 deficiency-related neurological syndromes. Neurol India (2005) 1.66

Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant moment digital representations. BMC Bioinformatics (2004) 1.64

Genomics. Vertebrate genomes compared. Science (2002) 1.57

Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders. Mol Biol Evol (2011) 1.55

Zinc oxide nanoparticles selectively induce apoptosis in human cancer cells through reactive oxygen species. Int J Nanomedicine (2012) 1.54

Automated annotation of Drosophila gene expression patterns using a controlled vocabulary. Bioinformatics (2008) 1.50

Performance of computational tools in evaluating the functional impact of laboratory-induced amino acid mutations. Bioinformatics (2012) 1.46

Decompressive surgery for severe cerebral venous sinus thrombosis. Neurol India (2010) 1.46

Drosophila Gene Expression Pattern Annotation Using Sparse Features and Term-Term Interactions. KDD (2009) 1.45

Taxon sampling, bioinformatics, and phylogenomics. Syst Biol (2003) 1.44

Improved lignocellulose conversion to biofuels with thermophilic bacteria and thermostable enzymes. Bioresour Technol (2012) 1.40

Generalized linear discriminant analysis: a unified framework and efficient model selection. IEEE Trans Neural Netw (2008) 1.40

Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials. PLoS Biol (2010) 1.40

Bilateral anterior shoulder dislocation: a case report. Eur J Emerg Med (2005) 1.35

A bag-of-words approach for Drosophila gene expression pattern annotation. BMC Bioinformatics (2009) 1.34

Classification of Drosophila embryonic developmental stage range based on gene expression pattern images. Comput Syst Bioinformatics Conf (2006) 1.33

FlyExpress: visual mining of spatiotemporal patterns for genes and publications in Drosophila embryogenesis. Bioinformatics (2011) 1.33

Comparison of embryonic expression within multigene families using the FlyExpress discovery platform reveals more spatial than temporal divergence. Dev Dyn (2011) 1.27

Robust Multi-Task Feature Learning. KDD (2012) 1.27

Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America. Virology (2003) 1.27

Sharing and re-use of phylogenetic trees (and associated data) to facilitate synthesis. BMC Res Notes (2012) 1.24

Local or general anesthesia for open hernia repair: a randomized trial. Ann Surg (2003) 1.20

Modeling disease progression via multi-task learning. Neuroimage (2013) 1.18

Fast and accurate matrix completion via truncated nuclear norm regularization. IEEE Trans Pattern Anal Mach Intell (2013) 1.17

Applying tensor-based morphometry to parametric surfaces can improve MRI-based disease diagnosis. Neuroimage (2013) 1.17

The origin of Metazoa: a transition from temporal to spatial cell differentiation. Bioessays (2009) 1.16

Patterns of transitional mutation biases within and among mammalian genomes. Mol Biol Evol (2003) 1.13

Maximum likelihood outperforms maximum parsimony even when evolutionary rates are heterotachous. Mol Biol Evol (2005) 1.12

Higher intensity of purifying selection on >90% of the human genes revealed by the intrinsic replacement mutation rates. Mol Biol Evol (2006) 1.12

Feature Grouping and Selection Over an Undirected Graph. KDD (2012) 1.12

Tuberculosis surveillance by analyzing Google trends. IEEE Trans Biomed Eng (2011) 1.11

Signatures of ecological resource availability in the animal and plant proteomes. Mol Biol Evol (2006) 1.10

Outcome of laparoscopic cholecystectomy in patients 80 years and older. World J Surg (2004) 1.09

Automatic age estimation based on facial aging patterns. IEEE Trans Pattern Anal Mach Intell (2007) 1.09

Branding: a harmful practice. Indian Pediatr (2005) 1.07

More reliable estimates of divergence times in Pan using complete mtDNA sequences and accounting for population structure. Philos Trans R Soc Lond B Biol Sci (2010) 1.05

Nanotoxicity of pure silica mediated through oxidant generation rather than glutathione depletion in human lung epithelial cells. Toxicology (2010) 1.05

A convex formulation for learning a shared predictive structure from multiple tasks. IEEE Trans Pattern Anal Mach Intell (2013) 1.05

Contamination levels and spatial distribution of organochlorine pesticides in soils from India. Ecotoxicol Environ Saf (2011) 1.04

The spectrum of human rhodopsin disease mutations through the lens of interspecific variation. Gene (2004) 1.04

Deep learning based imaging data completion for improved brain disease diagnosis. Med Image Comput Comput Assist Interv (2014) 1.03

Human genomic disease variants: a neutral evolutionary explanation. Genome Res (2012) 1.02

Isolated dorsal dislocation of the intermediate cunieform: a case report and review of the literature. Arch Orthop Trauma Surg (2003) 1.02

Developmental Stage Annotation of Drosophila Gene Expression Pattern Images via an Entire Solution Path for LDA. ACM Trans Knowl Discov Data (2008) 1.02

Relationship between gene co-expression and sharing of transcription factor binding sites in Drosophila melanogaster. Bioinformatics (2009) 1.02

Magnetic resonance evaluation of tubercular lesion in spine. Int Orthop (2011) 1.01

Isolated bilateral ptosis as the presentation of midbrain tuberculoma. Neurol India (2008) 1.01

The role of simultaneous gap arthroplasty and distraction osteogenesis in the management of temporo-mandibular joint ankylosis with mandibular deformity in children. J Craniomaxillofac Surg (2004) 1.01

DNA vaccines encoding viral envelope proteins confer protective immunity against WSSV in black tiger shrimp. Vaccine (2007) 1.01

Ecological nitrogen limitation shapes the DNA composition of plant genomes. Mol Biol Evol (2009) 1.00

A sparse structure learning algorithm for Gaussian Bayesian Network identification from high-dimensional data. IEEE Trans Pattern Anal Mach Intell (2013) 1.00

Canonical correlation analysis for multilabel classification: a least-squares formulation, extensions, and analysis. IEEE Trans Pattern Anal Mach Intell (2011) 1.00

Recognizing partially occluded, expression variant faces from single training image per person with SOM and soft kappa-NN ensemble. IEEE Trans Neural Netw (2005) 0.99

Evolutionary balancing is critical for correctly forecasting disease-associated amino acid variants. Mol Biol Evol (2013) 0.99

Holistic atlases of functional networks and interactions reveal reciprocal organizational architecture of cortical function. IEEE Trans Biomed Eng (2014) 0.98

Multifocal skeletal tuberculosis in children: a retrospective study of 18 cases. Scand J Infect Dis (2003) 0.97

Drosophila gene expression pattern annotation through multi-instance multi-label learning. IEEE/ACM Trans Comput Biol Bioinform (2011) 0.95

Kaempferol has osteogenic effect in ovariectomized adult Sprague-Dawley rats. Mol Cell Endocrinol (2008) 0.95

Reversible electrophysiological abnormalities in hypokalemic periodic paralysis. Indian Pediatr (2008) 0.95

Structural dynamics flexibility informs function and evolution at a proteome scale. Evol Appl (2013) 0.95

Stoichiogenomics: the evolutionary ecology of macromolecular elemental composition. Trends Ecol Evol (2010) 0.94