Published in J Biomed Inform on September 17, 2010
EliXR: an approach to eligibility criteria extraction and representation. J Am Med Inform Assoc (2011) 2.26
Analyzing the heterogeneity and complexity of Electronic Health Record oriented phenotyping algorithms. AMIA Annu Symp Proc (2011) 2.03
Dynamic categorization of clinical research eligibility criteria by hierarchical clustering. J Biomed Inform (2011) 1.29
Part-of-speech tagging for clinical text: wall or bridge between institutions? AMIA Annu Symp Proc (2011) 1.26
eTACTS: a method for dynamically filtering clinical trial search results. J Biomed Inform (2013) 1.19
Deficiencies in the transfer and availability of clinical trials evidence: a review of existing systems and standards. BMC Med Inform Decis Mak (2012) 1.19
Clustering clinical trials with similar eligibility criteria features. J Biomed Inform (2014) 1.18
Building gold standard corpora for medical natural language processing tasks. AMIA Annu Symp Proc (2012) 1.17
EliXR-TIME: A Temporal Knowledge Representation for Clinical Research Eligibility Criteria. AMIA Jt Summits Transl Sci Proc (2012) 1.13
Extracting temporal constraints from clinical research eligibility criteria using conditional random fields. AMIA Annu Symp Proc (2011) 1.12
Unsupervised mining of frequent tags for clinical eligibility text indexing. J Biomed Inform (2013) 1.11
ASCOT: a text mining-based web-service for efficient search and assisted creation of clinical trials. BMC Med Inform Decis Mak (2012) 1.07
A human-computer collaborative approach to identifying common data elements in clinical trial eligibility criteria. J Biomed Inform (2012) 1.06
Systematic identification of pharmacogenomics information from clinical trials. J Biomed Inform (2012) 1.03
The Ontology of Clinical Research (OCRe): an informatics foundation for the science of clinical research. J Biomed Inform (2013) 1.01
Computational challenges and human factors influencing the design and use of clinical research participant eligibility pre-screening tools. BMC Med Inform Decis Mak (2012) 0.94
ClinicalTrials.gov as a data source for semi-automated point-of-care trial eligibility screening. PLoS One (2014) 0.89
Case-based reasoning using electronic health records efficiently identifies eligible patients for clinical trials. J Am Med Inform Assoc (2015) 0.88
Employing computers for the recruitment into clinical trials: a comprehensive systematic review. J Med Internet Res (2014) 0.87
A pragmatic method for electronic medical record-based observational studies: developing an electronic medical records retrieval system for clinical research. BMJ Open (2012) 0.87
Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department. J Am Med Inform Assoc (2014) 0.87
Formalization and computation of quality measures based on electronic medical records. J Am Med Inform Assoc (2013) 0.86
Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations. Brief Bioinform (2016) 0.86
Evaluating predictive modeling algorithms to assess patient eligibility for clinical trials from routine data. BMC Med Inform Decis Mak (2013) 0.85
Ontology-based federated data access to human studies information. AMIA Annu Symp Proc (2012) 0.82
Scientific Reproducibility in Biomedical Research: Provenance Metadata Ontology for Semantic Annotation of Study Description. AMIA Annu Symp Proc (2017) 0.81
Textual inference for eligibility criteria resolution in clinical trials. J Biomed Inform (2015) 0.80
OWL model of clinical trial eligibility criteria compatible with partially-known information. J Biomed Semantics (2013) 0.79
ODMedit: uniform semantic annotation for data integration in medicine based on a public metadata repository. BMC Med Res Methodol (2016) 0.79
Trial prospector: matching patients with cancer research studies using an automated and scalable approach. Cancer Inform (2014) 0.79
A method for discovering and inferring appropriate eligibility criteria in clinical trial protocols without labeled data. BMC Med Inform Decis Mak (2013) 0.78
Desiderata for Major Eligibility Criteria in Breast Cancer Clinical Trials. AMIA Annu Symp Proc (2015) 0.77
Leveraging the EHR4CR platform to support patient inclusion in academic studies: challenges and lessons learned. BMC Med Res Methodol (2017) 0.75
Characterization of the Context of Drug Concepts in Research Protocols: An Empiric Study to Guide Ontology Development. AMIA Annu Symp Proc (2015) 0.75
Towards symbiosis in knowledge representation and natural language processing for structuring clinical practice guidelines. Stud Health Technol Inform (2014) 0.75
An ontology for Autism Spectrum Disorder (ASD) to infer ASD phenotypes from Autism Diagnostic Interview-Revised data. J Biomed Inform (2015) 0.75
A Method to Compare ICF and SNOMED CT for Coverage of U.S. Social Security Administration's Disability Listing Criteria. AMIA Annu Symp Proc (2015) 0.75
Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. Proc AMIA Symp (2001) 40.22
Relations in biomedical ontologies. Genome Biol (2005) 22.07
Automated encoding of clinical documents based on natural language processing. J Am Med Inform Assoc (2004) 11.48
Recruitment to randomised trials: strategies for trial enrollment and participation study. The STEPS study. Health Technol Assess (2007) 6.55
Comparing computer-interpretable guideline models: a case-study approach. J Am Med Inform Assoc (2003) 4.42
Improved identification of noun phrases in clinical radiology reports using a high-performance statistical natural language parser augmented with the UMLS specialist lexicon. J Am Med Inform Assoc (2005) 4.34
The SAGE Guideline Model: achievements and overview. J Am Med Inform Assoc (2007) 3.22
Formal representation of eligibility criteria: a literature review. J Biomed Inform (2009) 3.16
A virtual medical record for guideline-based decision support. Proc AMIA Symp (2001) 2.64
Sharing MLM's: an experiment between Columbia-Presbyterian and LDS Hospital. Proc Annu Symp Comput Appl Med Care (1993) 2.64
Analysis of eligibility criteria complexity in clinical trials. AMIA Jt Summits Transl Sci Proc (2010) 2.37
Modeling data and knowledge in the EON guideline architecture. Stud Health Technol Inform (2001) 1.72
Description and status update on GELLO: a proposed standardized object-oriented expression language for clinical decision support. Stud Health Technol Inform (2004) 1.65
Definitions and qualifiers in SNOMED CT. Methods Inf Med (2009) 1.37
An architecture for linking medical decision-support applications to clinical databases and its evaluation. J Biomed Inform (2008) 1.31
Mapping computerized clinical guidelines to electronic medical records: knowledge-data ontological mapper (KDOM). J Biomed Inform (2007) 1.28
SNOMED RT and SNOMEDCT. Promise of an international clinical terminology. MD Comput (2001) 1.14
Bridging the gap between therapeutic research results and physician prescribing decisions: knowledge transfer, a prerequisite to knowledge translation. Eur J Clin Pharmacol (2004) 1.01
Evaluating an NLP-based approach to modeling computable clinical trial eligibility criteria. AMIA Annu Symp Proc (2007) 0.95
Physicians' use of electronic medical records: barriers and solutions. Health Aff (Millwood) (2004) 7.20
The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience. Neuroinformatics (2008) 5.38
Network analysis of intrinsic functional brain connectivity in Alzheimer's disease. PLoS Comput Biol (2008) 5.15
National Center for Biomedical Ontology: advancing biomedicine through structured organization of scientific knowledge. OMICS (2006) 3.96
Publication of clinical trials supporting successful new drug applications: a literature analysis. PLoS Med (2008) 3.64
Formal representation of eligibility criteria: a literature review. J Biomed Inform (2009) 3.16
Health care delivery. Open mHealth architecture: an engine for health care innovation. Science (2010) 3.00
Comparison of concept recognizers for building the Open Biomedical Annotator. BMC Bioinformatics (2009) 2.83
The value of electronic health records in solo or small group practices. Health Aff (Millwood) (2005) 2.74
Curcumin, a major constituent of turmeric, corrects cystic fibrosis defects. Science (2004) 2.39
Analysis of eligibility criteria complexity in clinical trials. AMIA Jt Summits Transl Sci Proc (2010) 2.37
An ontology of randomized controlled trials for evidence-based practice: content specification and evaluation using the competency decomposition method. J Biomed Inform (2004) 2.30
Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs. Acad Med (2009) 2.25
iTools: a framework for classification, categorization and integration of computational biology resources. PLoS One (2008) 2.18
Shoulder and head elevation improves laryngoscopic view for tracheal intubation in nonobese as well as obese individuals. J Clin Anesth (2012) 2.06
Automated information extraction of key trial design elements from clinical trial publications. AMIA Annu Symp Proc (2008) 1.93
GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines. J Biomed Inform (2004) 1.91
Infectivity-associated changes in the transcriptional repertoire of the malaria parasite sporozoite stage. J Biol Chem (2002) 1.83
Compliance of clinical trial registries with the World Health Organization minimum data set: a survey. Trials (2009) 1.80
A taxonomic description of computer-based clinical decision support systems. J Biomed Inform (2006) 1.79
Differential transcriptome profiling identifies Plasmodium genes encoding pre-erythrocytic stage-specific proteins. Mol Microbiol (2004) 1.76
ExaCT: automatic extraction of clinical trial characteristics from journal publications. BMC Med Inform Decis Mak (2010) 1.74
Development and evaluation of a study design typology for human research. AMIA Annu Symp Proc (2009) 1.70
Representation primitives, process models and patient data in computer-interpretable clinical practice guidelines: a literature review of guideline representation models. Int J Med Inform (2002) 1.66
The human studies database project: federating human studies design data using the ontology of clinical research. AMIA Jt Summits Transl Sci Proc (2010) 1.58
Automatic classification of mammography reports by BI-RADS breast tissue composition class. J Am Med Inform Assoc (2012) 1.35
Influence of light at night on murine anxiety- and depressive-like responses. Behav Brain Res (2009) 1.31
Design and implementation of the GLIF3 guideline execution engine. J Biomed Inform (2004) 1.26
Using Petri Net tools to study properties and dynamics of biological systems. J Am Med Inform Assoc (2004) 1.23
Making sense of mobile health data: an open architecture to improve individual- and population-level health. J Med Internet Res (2012) 1.17
TLR cross-talk specifically regulates cytokine production by B cells from chronic inflammatory disease patients. J Immunol (2009) 1.16
EliXR-TIME: A Temporal Knowledge Representation for Clinical Research Eligibility Criteria. AMIA Jt Summits Transl Sci Proc (2012) 1.13
The Primary Care Research Object Model (PCROM): a computable information model for practice-based primary care research. J Am Med Inform Assoc (2008) 1.12
Managing biomedical image metadata for search and retrieval of similar images. J Digit Imaging (2011) 1.12
The Trial Bank system: capturing randomized trials for evidence-based medicine. AMIA Annu Symp Proc (2003) 1.07
Trial bank publishing: phase I results. Stud Health Technol Inform (2004) 1.06
A pattern-based analysis of clinical computer-interpretable guideline modeling languages. J Am Med Inform Assoc (2007) 1.04
Towards parenthood: an antenatal intervention to reduce depression, anxiety and parenting difficulties. J Affect Disord (2010) 1.03
Network analysis of clinical trials on depression: implications for comparative effectiveness research. AMIA Annu Symp Proc (2010) 1.02
Hippocampal volume differences in Gulf War veterans with current versus lifetime posttraumatic stress disorder symptoms. Biol Psychiatry (2010) 1.01
#CochraneTech: technology and the future of systematic reviews. Cochrane Database Syst Rev (2014) 0.99
Differential regulation of dihydroceramide desaturase by palmitate versus monounsaturated fatty acids: implications for insulin resistance. J Biol Chem (2011) 0.98
Quantifying the margin sharpness of lesions on radiological images for content-based image retrieval. Med Phys (2012) 0.97
Ontology mapping and data discovery for the translational investigator. AMIA Jt Summits Transl Sci Proc (2010) 0.97
The National Cancer Informatics Program (NCIP) Annotation and Image Markup (AIM) Foundation model. J Digit Imaging (2014) 0.95
Antibiotic treatment of acute bronchitis in smokers: a systematic review. J Gen Intern Med (2002) 0.95
A goal-oriented framework for specifying clinical guidelines and handling medical errors. J Biomed Inform (2009) 0.95
Deriving an abstraction network to support quality assurance in OCRe. AMIA Annu Symp Proc (2012) 0.95
Comparing the context and the SitBAC models for privacy preservation in terms of model understanding and synthesis. AMIA Annu Symp Proc (2008) 0.95
Suppressed monocyte gene expression profile in men versus women with PTSD. Brain Behav Immun (2010) 0.94
Automatic annotation of radiological observations in liver CT images. AMIA Annu Symp Proc (2012) 0.92
Cross-linking chemistry of squid beak. J Biol Chem (2010) 0.92
A comprehensive descriptor of shape: method and application to content-based retrieval of similar appearing lesions in medical images. J Digit Imaging (2012) 0.92
An interactive tool for visualizing design heterogeneity in clinical trials. AMIA Annu Symp Proc (2008) 0.91
Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project. BMC Med Genomics (2014) 0.90
Glomerular activation patterns and the perception of odor mixtures. Eur J Neurosci (2008) 0.90
Sponsorship and design characteristics of trials registered in ClinicalTrials.gov. Contemp Clin Trials (2013) 0.90
Predicting visual semantic descriptive terms from radiological image data: preliminary results with liver lesions in CT. IEEE Trans Med Imaging (2014) 0.89
Patterns for collaborative work in health care teams. Artif Intell Med (2011) 0.88
RuleEd, a web-based semantic network interface for constructing and revising computable eligibility rules. AMIA Annu Symp Proc (2006) 0.87
Electronic medical records in solo/small groups: a qualitative study of physician user types. Stud Health Technol Inform (2004) 0.84
GESDOR - a generic execution model for sharing of computer-interpretable clinical practice guidelines. AMIA Annu Symp Proc (2003) 0.84
Characteristics of outpatient clinical decision support systems: a taxonomic description. Stud Health Technol Inform (2004) 0.84
Unintended consequences of health information technology: a need for biomedical informatics. J Biomed Inform (2009) 0.83
Ontology-based federated data access to human studies information. AMIA Annu Symp Proc (2012) 0.82
EyePACS: an open source clinical communication system for eye care. Stud Health Technol Inform (2004) 0.82
Annotation for information extraction from mammography reports. Stud Health Technol Inform (2013) 0.81
Temporal stability of receptiveness to clinical research on Alzheimer disease. Alzheimer Dis Assoc Disord (2010) 0.80
Hepatic MR imaging with ferumoxides: multicenter study of safety and effectiveness of direct injection protocol. Radiology (2003) 0.80
Tools for Identifying Reliable Evidence and Implementing it in Everyday Clinical Care. AMIA Jt Summits Transl Sci Proc (2013) 0.80
Fluid-structure interaction model of aortic valve with porcine-specific collagen fiber alignment in the cusps. J Biomech Eng (2013) 0.79
Knowledge Zone: a public repository of peer-reviewed biomedical ontologies. Stud Health Technol Inform (2007) 0.78
Internet Cognitive Behavioral Therapy for Women With Postnatal Depression: A Randomized Controlled Trial of MumMoodBooster. J Med Internet Res (2016) 0.78
SysBank: a knowledge base for systematic reviews of randomized clinical trials. AMIA Annu Symp Proc (2003) 0.78
Feasibility study and pilot randomised trial of an antenatal depression treatment with infant follow-up. Arch Womens Ment Health (2015) 0.78
Patient-tailored workflow patterns from clinical practice guidelines recommendations. Stud Health Technol Inform (2013) 0.78
Keeping raw data in context. Science (2009) 0.78
Two Ways of Knowing: Big Data and Evidence-Based Medicine. Ann Intern Med (2016) 0.76
Eliciting and characterizing scenarios of disclosure of private health data. AMIA Annu Symp Proc (2006) 0.75
Pattern-based analysis of computer-interpretable guidelines: don't forget the context. Artif Intell Med (2011) 0.75
Assessing clinical trial results. Science (2006) 0.75
Changes to NIH grant system may backfire. Science (2008) 0.75
International clinical trial registration: any progress? Wien Klin Wochenschr (2006) 0.75
Characterizing primary care research: PCROM versus BRIDG. AMIA Annu Symp Proc (2008) 0.75
Job Satisfaction Among Academic Family Physicians. Fam Med (2017) 0.75
A 3-D Riesz-Covariance Texture Model for Prediction of Nodule Recurrence in Lung CT. IEEE Trans Med Imaging (2016) 0.75
Quantifying the gap between proof and practice. Evid Based Cardiovasc Med (2004) 0.75
Pancreatic cancer. Integr Cancer Ther (2008) 0.75
[Principles of the international registry of protocols and clinical trial results based on health interventions in human beings: Ottawa Declaration (part 1)]. Rev Panam Salud Publica (2006) 0.75