Published in BMC Mol Biol on January 13, 2011
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Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus. Proteomics (2010) 1.04
Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics (2009) 1.00
Chlorophyll-binding proteins revisited--a multigenic family of light-harvesting and stress proteins from a brown algal perspective. BMC Evol Biol (2010) 0.91
Transcript profiling of common bean (Phaseolus vulgaris L.) using the GeneChip Soybean Genome Array: optimizing analysis by masking biased probes. BMC Plant Biol (2010) 0.90
Subunit composition and pigmentation of fucoxanthin-chlorophyll proteins in diatoms: evidence for a subunit involved in diadinoxanthin and diatoxanthin binding. Biochemistry (2006) 0.89
Transcriptome analysis of acclimatory responses to thermal stress in Antarctic algae. Biochem Biophys Res Commun (2008) 0.88
The fluorescence yield of the trimeric fucoxanthin-chlorophyll-protein FCPa in the diatom Cyclotella meneghiniana is dependent on the amount of bound diatoxanthin. Photosynth Res (2007) 0.88
Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain. New Phytol (2010) 0.83
Whole genome survey of the glutathione transferase family in the brown algal model Ectocarpus siliculosus. Mar Genomics (2009) 0.82
Extending KNIME for next-generation sequencing data analysis. Bioinformatics (2011) 8.45
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Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA. Mol Microbiol (2003) 2.81
Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors. Plant Cell (2007) 2.11
Virulence strategies for infecting phagocytes deduced from the in vivo transcriptional program of Legionella pneumophila. Cell Microbiol (2006) 1.79
The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes. New Phytol (2010) 1.78
GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli. Microbiology (2004) 1.71
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Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans. BMC Microbiol (2010) 1.59
A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth. Plant Physiol (2005) 1.55
Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells. J Immunol (2006) 1.55
The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila. Proc Natl Acad Sci U S A (2009) 1.44
BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size. EMBO J (2006) 1.37
Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress. Genome Biol (2009) 1.36
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proc Natl Acad Sci U S A (2013) 1.36
Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus. Development (2008) 1.32
A role for SIRT2-dependent histone H3K18 deacetylation in bacterial infection. Science (2013) 1.32
Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia. BMC Genomics (2008) 1.31
Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides. Environ Microbiol (2012) 1.30
Analysis of gene expression in rose petals using expressed sequence tags. FEBS Lett (2002) 1.28
Structure, function, and evolution of the Thiomonas spp. genome. PLoS Genet (2010) 1.27
Interaction of calmodulin, a sorting nexin and kinase-associated protein phosphatase with the Brassica oleracea S locus receptor kinase. Plant Physiol (2003) 1.26
Genome-wide identification of regulatory RNAs in the human pathogen Clostridium difficile. PLoS Genet (2013) 1.23
Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate. BMC Genomics (2008) 1.23
HECTAR: a method to predict subcellular targeting in heterokonts. BMC Bioinformatics (2008) 1.22
ATM-mediated transcriptional and developmental responses to gamma-rays in Arabidopsis. PLoS One (2007) 1.20
High vertical and low horizontal diversity of Prochlorococcus ecotypes in the Mediterranean Sea in summer. FEMS Microbiol Ecol (2007) 1.19
Field-based evidence of fast and global increase of Plasmodium falciparum drug-resistance by DNA-microarrays and PCR/RFLP in Niger. Malar J (2009) 1.19
Transcriptome analysis of Yersinia pestis in human plasma: an approach for discovering bacterial genes involved in septicaemic plague. Microbiology (2007) 1.19
Complex life cycles of multicellular eukaryotes: new approaches based on the use of model organisms. Gene (2007) 1.18
Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus. BMC Mol Biol (2008) 1.17
Starvation, together with the SOS response, mediates high biofilm-specific tolerance to the fluoroquinolone ofloxacin. PLoS Genet (2013) 1.16
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma. BMC Genomics (2010) 1.16
Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes. New Phytol (2010) 1.15
Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles. RNA (2011) 1.13
The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis. Cell Microbiol (2007) 1.12
Artesunate tolerance in transgenic Plasmodium falciparum parasites overexpressing a tryptophan-rich protein. Antimicrob Agents Chemother (2011) 1.12
The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence. Infect Immun (2009) 1.12
Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids. BMC Evol Biol (2009) 1.12
Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes. BMC Plant Biol (2009) 1.07
Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus. Mol Microbiol (2013) 1.07
The FTO gene, implicated in human obesity, is found only in vertebrates and marine algae. J Mol Evol (2007) 1.07
Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum. BMC Genomics (2014) 1.05
A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence. New Phytol (2010) 1.05
Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus. Proteomics (2010) 1.04
Massive activation of archaeal defense genes during viral infection. J Virol (2013) 1.03
Making inroads into plant receptor kinase signalling pathways. Trends Plant Sci (2003) 1.03
Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases. FEBS Lett (2002) 1.03
CymR, the master regulator of cysteine metabolism in Staphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation. Mol Microbiol (2009) 1.03
Copper stress induces biosynthesis of octadecanoid and eicosanoid oxygenated derivatives in the brown algal kelp Laminaria digitata. New Phytol (2008) 1.02
Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity. Cell Microbiol (2008) 1.02
Overexpression of proinflammatory TLR-2-signalling lipoproteins in hypervirulent mycobacterial variants. Cell Microbiol (2011) 1.01
NADPH oxidases in Eukaryotes: red algae provide new hints! Curr Genet (2005) 1.00
Both the adaxial and abaxial epidermal layers of the rose petal emit volatile scent compounds. Planta (2007) 1.00
Characterization of mannuronan C-5-epimerase genes from the brown alga Laminaria digitata. Plant Physiol (2003) 0.99
Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes. BMC Genomics (2009) 0.99
The Yak1 kinase is involved in the initiation and maintenance of hyphal growth in Candida albicans. Mol Biol Cell (2008) 0.98
Oligoalginate recognition and oxidative burst play a key role in natural and induced resistance of sporophytes of laminariales. J Chem Ecol (2002) 0.98
Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations. Fungal Genet Biol (2008) 0.98
OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus. Proc Natl Acad Sci U S A (2011) 0.97
Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica. Nucleic Acids Res (2012) 0.97
Response of the transcriptome of the intertidal red seaweed Chondrus crispus to controlled and natural stresses. New Phytol (2007) 0.96
RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans. BMC Genomics (2012) 0.96
Unusual composition of a yeast chromosome arm is associated with its delayed replication. Genome Res (2009) 0.96
Plasmodium falciparum transcriptome analysis reveals pregnancy malaria associated gene expression. PLoS One (2008) 0.96
Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide. PLoS One (2012) 0.95
Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus. New Phytol (2010) 0.95