PubRank

Can Alkan

Author PubWeight™ 202.51‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Mapping and sequencing of structural variation from eight human genomes. Nature 2008 30.28
2 A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD. Neuron 2011 18.73
3 Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding. Genome Res 2009 15.15
4 Mapping copy number variation by population-scale genome sequencing. Nature 2011 12.55
5 Complete Khoisan and Bantu genomes from southern Africa. Nature 2010 9.06
6 Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature 2010 8.99
7 Diversity of human copy number variation and multicopy genes. Science 2010 8.97
8 A high-coverage genome sequence from an archaic Denisovan individual. Science 2012 7.89
9 Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes. Genome Res 2009 6.42
10 Characterization of missing human genome sequences and copy-number polymorphic insertions. Nat Methods 2010 5.44
11 Haplotype-resolved genome sequencing of a Gujarati Indian individual. Nat Biotechnol 2010 5.32
12 mrsFAST: a cache-oblivious algorithm for short-read mapping. Nat Methods 2010 4.38
13 Insights into hominid evolution from the gorilla genome sequence. Nature 2012 4.12
14 Comparative and demographic analysis of orang-utan genomes. Nature 2011 3.83
15 A burst of segmental duplications in the genome of the African great ape ancestor. Nature 2009 3.63
16 MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions. Nat Methods 2009 3.15
17 Great ape genetic diversity and population history. Nature 2013 2.95
18 Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery. Bioinformatics 2010 2.90
19 The structure and evolution of centromeric transition regions within the human genome. Nature 2004 2.78
20 Reconstructing complex regions of genomes using long-read sequencing technology. Genome Res 2014 2.63
21 A large and complex structural polymorphism at 16p12.1 underlies microdeletion disease risk. Nat Genet 2010 2.57
22 The bonobo genome compared with the chimpanzee and human genomes. Nature 2012 2.49
23 Detection of structural variants and indels within exome data. Nat Methods 2011 2.27
24 Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. Bioinformatics 2010 2.23
25 Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder. Am J Hum Genet 2013 2.15
26 Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome. Genome Res 2003 2.07
27 Comparative analysis of Alu repeats in primate genomes. Genome Res 2009 1.85
28 Death and resurrection of the human IRGM gene. PLoS Genet 2009 1.72
29 Copy number variation of individual cattle genomes using next-generation sequencing. Genome Res 2012 1.62
30 Alu repeat discovery and characterization within human genomes. Genome Res 2010 1.62
31 SCALCE: boosting sequence compression algorithms using locally consistent encoding. Bioinformatics 2012 1.57
32 Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee. Genome Res 2011 1.47
33 Optimal design of oligonucleotide microarrays for measurement of DNA copy-number. Hum Mol Genet 2007 1.17
34 taveRNA: a web suite for RNA algorithms and applications. Nucleic Acids Res 2007 0.98
35 Identification and validation of a novel mature microRNA encoded by the Merkel cell polyomavirus in human Merkel cell carcinomas. J Clin Virol 2011 0.98
36 Sensitive and fast mapping of di-base encoded reads. Bioinformatics 2011 0.94
37 Accelerating read mapping with FastHASH. BMC Genomics 2013 0.94
38 Rates and patterns of great ape retrotransposition. Proc Natl Acad Sci U S A 2013 0.90
39 Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa. BMC Genomics 2014 0.88
40 The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild. BMC Genomics 2013 0.87
41 Clcn4-2 genomic structure differs between the X locus in Mus spretus and the autosomal locus in Mus musculus: AT motif enrichment on the X. Genome Res 2011 0.79