PubRank

Amrita Pati

Author PubWeight™ 188.58‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature 2009 15.06
2 A catalog of reference genomes from the human microbiome. Science 2010 8.10
3 IMG 4 version of the integrated microbial genomes comparative analysis system. Nucleic Acids Res 2013 6.14
4 Complete genome sequence of Kytococcus sedentarius type strain (541). Stand Genomic Sci 2009 3.30
5 IMG/M 4 version of the integrated metagenome comparative analysis system. Nucleic Acids Res 2013 2.99
6 IMG/M: the integrated metagenome data management and comparative analysis system. Nucleic Acids Res 2011 2.76
7 The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea. ISME J 2009 2.00
8 Complete genome sequence of Meiothermus ruber type strain (21). Stand Genomic Sci 2010 1.96
9 Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3). Stand Genomic Sci 2009 1.82
10 Genome sequence of "Candidatus Frankia datiscae" Dg1, the uncultured microsymbiont from nitrogen-fixing root nodules of the dicot Datisca glomerata. J Bacteriol 2011 1.79
11 Draft genome sequence of Frankia sp. strain CN3, an atypical, noninfective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis. Genome Announc 2013 1.51
12 Genomic potential of Marinobacter aquaeolei, a biogeochemical "opportunitroph". Appl Environ Microbiol 2011 1.50
13 Draft genome sequence of Frankia sp. strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida. Genome Announc 2013 1.42
14 Draft Genome Sequence of Frankia sp. Strain BMG5.12, a Nitrogen-Fixing Actinobacterium Isolated from Tunisian Soils. Genome Announc 2013 1.35
15 Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255). Stand Genomic Sci 2009 1.34
16 Complete genome sequence of Spirosoma linguale type strain (1). Stand Genomic Sci 2010 1.32
17 Draft Genome Sequence of Frankia sp. Strain BCU110501, a Nitrogen-Fixing Actinobacterium Isolated from Nodules of Discaria trinevis. Genome Announc 2013 1.27
18 Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034). Stand Genomic Sci 2010 1.21
19 Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10). Stand Genomic Sci 2009 1.17
20 Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus. J Bacteriol 2011 1.16
21 Complete genome sequence of Segniliparus rotundus type strain (CDC 1076). Stand Genomic Sci 2010 1.15
22 Complete genome sequence of Cryptobacterium curtum type strain (12-3). Stand Genomic Sci 2009 1.12
23 Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845). Stand Genomic Sci 2011 1.08
24 Complete genome sequence of Saccharomonospora viridis type strain (P101). Stand Genomic Sci 2009 1.07
25 Complete genome sequence of Haloterrigena turkmenica type strain (4k). Stand Genomic Sci 2010 1.06
26 Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21). Stand Genomic Sci 2011 1.06
27 Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta. Stand Genomic Sci 2012 1.05
28 Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations. Stand Genomic Sci 2013 1.04
29 Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1). Stand Genomic Sci 2009 1.04
30 Complete genome sequence of Desulfobulbus propionicus type strain (1pr3). Stand Genomic Sci 2011 1.01
31 Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122). Stand Genomic Sci 2009 1.00
32 Complete genome sequence of Sulfurimonas autotrophica type strain (OK10). Stand Genomic Sci 2010 1.00
33 Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575). Stand Genomic Sci 2009 1.00
34 Complete genome sequence of Cellulophaga lytica type strain (LIM-21). Stand Genomic Sci 2011 0.99
35 Complete genome sequence of Dyadobacter fermentans type strain (NS114). Stand Genomic Sci 2009 0.99
36 Complete genome sequence of Aminobacterium colombiense type strain (ALA-1). Stand Genomic Sci 2010 0.99
37 Complete genome sequence of Arcobacter nitrofigilis type strain (CI). Stand Genomic Sci 2010 0.99
38 Complete genome sequence of Planctomyces limnophilus type strain (Mü 290). Stand Genomic Sci 2010 0.98
39 Complete genome sequence of Anaerococcus prevotii type strain (PC1). Stand Genomic Sci 2009 0.97
40 Complete genome sequence of Halomicrobium mukohataei type strain (arg-2). Stand Genomic Sci 2009 0.97
41 Complete genome sequence of Desulfomicrobium baculatum type strain (X). Stand Genomic Sci 2009 0.97
42 Estimating DNA coverage and abundance in metagenomes using a gamma approximation. Bioinformatics 2009 0.97
43 Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin. Genome Announc 2013 0.97
44 Complete genome sequence of Paludibacter propionicigenes type strain (WB4). Stand Genomic Sci 2011 0.97
45 Complete genome sequence of Thermosphaera aggregans type strain (M11TL). Stand Genomic Sci 2010 0.96
46 Complete genome sequence of Gordonia bronchialis type strain (3410). Stand Genomic Sci 2010 0.96
47 Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and Rainey, 2010. Stand Genomic Sci 2011 0.96
48 Complete genome sequence of Isosphaera pallida type strain (IS1B). Stand Genomic Sci 2011 0.96
49 Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP). Stand Genomic Sci 2009 0.95
50 Complete genome sequence of Actinosynnema mirum type strain (101). Stand Genomic Sci 2009 0.95
51 Complete genome sequence of Sulfurospirillum deleyianum type strain (5175). Stand Genomic Sci 2010 0.95
52 Complete genome sequence of Halorhabdus utahensis type strain (AX-2). Stand Genomic Sci 2009 0.95
53 Complete genome sequence of Haliangium ochraceum type strain (SMP-2). Stand Genomic Sci 2010 0.94
54 The genome sequence of Methanohalophilus mahii SLP(T) reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments. Archaea 2010 0.94
55 Complete genome sequence of Catenulispora acidiphila type strain (ID 139908). Stand Genomic Sci 2009 0.93
56 ClaMS: A Classifier for Metagenomic Sequences. Stand Genomic Sci 2011 0.93
57 Complete genome sequence of Treponema succinifaciens type strain (6091). Stand Genomic Sci 2011 0.93
58 Complete genome sequence of Geodermatophilus obscurus type strain (G-20). Stand Genomic Sci 2010 0.92
59 Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883). Stand Genomic Sci 2009 0.92
60 High-quality draft genome sequence of the Opitutaceae bacterium strain TAV1, a symbiont of the wood-feeding termite Reticulitermes flavipes. J Bacteriol 2012 0.91
61 Complete genome sequence of Cellulophaga algicola type strain (IC166). Stand Genomic Sci 2011 0.91
62 Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509). Stand Genomic Sci 2010 0.90
63 Complete genome sequence of Olsenella uli type strain (VPI D76D-27C). Stand Genomic Sci 2010 0.90
64 Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1(T)). Stand Genomic Sci 2012 0.90
65 Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113). Stand Genomic Sci 2011 0.90
66 Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T. J Bacteriol 2012 0.90
67 Complete genome sequence of Leadbetterella byssophila type strain (4M15). Stand Genomic Sci 2011 0.90
68 Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228). Stand Genomic Sci 2010 0.90
69 Complete genome sequence of Leptotrichia buccalis type strain (C-1013-b). Stand Genomic Sci 2009 0.90
70 Complete genome sequence of Truepera radiovictrix type strain (RQ-24). Stand Genomic Sci 2011 0.90
71 Complete genome sequence of Desulfarculus baarsii type strain (2st14). Stand Genomic Sci 2010 0.89
72 Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL). Stand Genomic Sci 2011 0.89
73 Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling. Stand Genomic Sci 2013 0.89
74 Complete genome sequence of Halogeometricum borinquense type strain (PR3). Stand Genomic Sci 2009 0.89
75 Complete genome sequence of Desulfurispirillum indicum strain S5(T). Stand Genomic Sci 2011 0.89
76 Complete genome sequence of Pirellula staleyi type strain (ATCC 27377). Stand Genomic Sci 2009 0.89
77 Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema. Stand Genomic Sci 2013 0.89
78 Complete genome sequence of Veillonella parvula type strain (Te3). Stand Genomic Sci 2010 0.88
79 Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24). Stand Genomic Sci 2010 0.88
80 Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022). Stand Genomic Sci 2010 0.88
81 Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules. Genome Announc 2013 0.88
82 Complete genome sequence of Odoribacter splanchnicus type strain (1651/6). Stand Genomic Sci 2011 0.88
83 Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA). Stand Genomic Sci 2010 0.87
84 Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)). Stand Genomic Sci 2012 0.87
85 Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207). Stand Genomic Sci 2010 0.87
86 Complete genome sequence of Streptobacillus moniliformis type strain (9901). Stand Genomic Sci 2009 0.87
87 Complete genome sequence of Archaeoglobus profundus type strain (AV18). Stand Genomic Sci 2010 0.87
88 Complete genome sequence of Cellulomonas flavigena type strain (134). Stand Genomic Sci 2010 0.86
89 Complete genome sequence of Marivirga tractuosa type strain (H-43). Stand Genomic Sci 2011 0.86
90 Complete genome sequence of Sanguibacter keddieii type strain (ST-74). Stand Genomic Sci 2009 0.86
91 Complete genome sequence of Thioalkalivibrio sp. K90mix. Stand Genomic Sci 2011 0.85
92 Complete genome sequence of Nakamurella multipartita type strain (Y-104). Stand Genomic Sci 2010 0.85
93 Complete genome sequence of Brachyspira murdochii type strain (56-150). Stand Genomic Sci 2010 0.85
94 Complete genome sequence of Kangiella koreensis type strain (SW-125). Stand Genomic Sci 2009 0.85
95 Complete genome sequence of Bacteroides salanitronis type strain (BL78). Stand Genomic Sci 2011 0.85
96 Complete genome sequence of Paenibacillus sp. strain JDR-2. Stand Genomic Sci 2012 0.85
97 Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens. Genome Announc 2013 0.85
98 Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845). Stand Genomic Sci 2009 0.84
99 Complete genome sequence of Vulcanisaeta distributa type strain (IC-017). Stand Genomic Sci 2010 0.84
100 Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21). Stand Genomic Sci 2009 0.84
101 Complete genome sequence of Methanoplanus petrolearius type strain (SEBR 4847). Stand Genomic Sci 2010 0.84
102 Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1). Stand Genomic Sci 2010 0.84
103 Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228P). Stand Genomic Sci 2010 0.84
104 Complete genome sequence of Thermomonospora curvata type strain (B9). Stand Genomic Sci 2011 0.84
105 Complete genome sequence of Haliscomenobacter hydrossis type strain (O). Stand Genomic Sci 2011 0.84
106 Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1). Stand Genomic Sci 2010 0.83
107 Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3). Stand Genomic Sci 2010 0.83
108 Complete genome sequence of Ferrimonas balearica type strain (PAT). Stand Genomic Sci 2010 0.83
109 Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300). Stand Genomic Sci 2010 0.83
110 Complete genome sequence of Deinococcus maricopensis type strain (LB-34). Stand Genomic Sci 2011 0.82
111 Complete genome sequence of Rhodothermus marinus type strain (R-10). Stand Genomic Sci 2009 0.82
112 Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)). Stand Genomic Sci 2012 0.82
113 Complete genome sequence of Bacteroides helcogenes type strain (P 36-108). Stand Genomic Sci 2011 0.82
114 Complete genome sequence of "Thioalkalivibrio sulfidophilus" HL-EbGr7. Stand Genomic Sci 2011 0.82
115 Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460). Stand Genomic Sci 2010 0.82
116 Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A). Stand Genomic Sci 2011 0.82
117 Complete genome sequence of Acidaminococcus fermentans type strain (VR4). Stand Genomic Sci 2010 0.82
118 Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)). Stand Genomic Sci 2010 0.81
119 Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812(T)). Stand Genomic Sci 2012 0.81
120 Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date. Genome Biol Evol 2012 0.81
121 Complete genome sequence of Weeksella virosa type strain (9751). Stand Genomic Sci 2011 0.81
122 Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NAL(T)). Stand Genomic Sci 2012 0.81
123 Complete genome sequence of Meiothermus silvanus type strain (VI-R2). Stand Genomic Sci 2010 0.81
124 Complete genome sequence of Thermocrinis albus type strain (HI 11/12). Stand Genomic Sci 2010 0.81
125 Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10). Stand Genomic Sci 2011 0.80
126 Complete genome sequence of Arcanobacterium haemolyticum type strain (11018). Stand Genomic Sci 2010 0.80
127 Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6). Stand Genomic Sci 2011 0.80
128 Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262). Stand Genomic Sci 2011 0.80
129 Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA(T)). Stand Genomic Sci 2013 0.80
130 Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach. Nucleic Acids Res 2009 0.80
131 Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1). Stand Genomic Sci 2010 0.80
132 Complete genome sequence of Tsukamurella paurometabola type strain (no. 33). Stand Genomic Sci 2011 0.80
133 Complete genome sequence of Coriobacterium glomerans type strain (PW2(T)) from the midgut of Pyrrhocoris apterus L. (red soldier bug). Stand Genomic Sci 2013 0.79
134 Complete genome sequence of Desulfurococcus mucosus type strain (O7/1). Stand Genomic Sci 2011 0.79
135 Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1). Stand Genomic Sci 2010 0.79
136 Complete genome sequence of Oceanithermus profundus type strain (506). Stand Genomic Sci 2011 0.79
137 Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134). Stand Genomic Sci 2009 0.79
138 Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T)). Stand Genomic Sci 2012 0.79
139 Complete genome sequence of Kribbella flavida type strain (IFO 14399). Stand Genomic Sci 2010 0.79
140 Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288). Stand Genomic Sci 2010 0.79
141 Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1). Stand Genomic Sci 2011 0.79
142 Complete genome sequence of Mahella australiensis type strain (50-1 BON). Stand Genomic Sci 2011 0.78
143 Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1(T)). Stand Genomic Sci 2012 0.78
144 Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1). Stand Genomic Sci 2011 0.78
145 Complete genome sequence of Staphylothermus hellenicus P8. Stand Genomic Sci 2011 0.78
146 Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801(T)). Stand Genomic Sci 2012 0.78
147 Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2)). Stand Genomic Sci 2011 0.78
148 Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07). Stand Genomic Sci 2010 0.78
149 Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA(T)) from a deep-sea hydrothermal vent. Stand Genomic Sci 2011 0.78
150 Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)). Stand Genomic Sci 2012 0.78
151 Non-contiguous finished genome sequence of Bacteroides coprosuis type strain (PC139). Stand Genomic Sci 2011 0.78
152 Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2). Stand Genomic Sci 2011 0.77
153 Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437(T)). Stand Genomic Sci 2013 0.77
154 Complete genome sequence of Conexibacter woesei type strain (ID131577). Stand Genomic Sci 2010 0.77
155 Complete genome sequence of Thermaerobacter marianensis type strain (7p75a). Stand Genomic Sci 2010 0.77
156 Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens. Genome Announc 2013 0.77
157 Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP(T)). Stand Genomic Sci 2012 0.77
158 Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile. Genome Announc 2013 0.77
159 Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete. Genome Announc 2013 0.77
160 Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift. Stand Genomic Sci 2013 0.77
161 Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney. Stand Genomic Sci 2012 0.77
162 Complete genome sequence of Methanothermus fervidus type strain (V24S). Stand Genomic Sci 2010 0.76
163 Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)). Stand Genomic Sci 2012 0.76
164 Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377). Stand Genomic Sci 2010 0.76
165 Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)). Stand Genomic Sci 2011 0.76
166 High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5(T)). Stand Genomic Sci 2013 0.76
167 Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H(T)), and emendation of the species Turneriella parva. Stand Genomic Sci 2013 0.76
168 Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)). Stand Genomic Sci 2013 0.75
169 Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8(T)). Stand Genomic Sci 2012 0.75
170 Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1). Stand Genomic Sci 2012 0.75
171 Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyR). Stand Genomic Sci 2011 0.75
172 Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20). Stand Genomic Sci 2011 0.75
173 Complete genome sequence of Intrasporangium calvum type strain (7 KIP). Stand Genomic Sci 2010 0.75