Published in New Phytol on March 28, 2011
NGS technologies for analyzing germplasm diversity in genebanks. Brief Funct Genomics (2012) 1.76
New insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varieties. PLoS Genet (2012) 1.73
Tibet is one of the centers of domestication of cultivated barley. Proc Natl Acad Sci U S A (2012) 1.48
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant J (2013) 1.34
Barley landraces are characterized by geographically heterogeneous genomic origins. Genome Biol (2015) 1.02
Evolutionary history of wild barley (Hordeum vulgare subsp. spontaneum) analyzed using multilocus sequence data and paleodistribution modeling. Genome Biol Evol (2014) 0.99
Genetic diversity and ecological niche modelling of wild barley: refugia, large-scale post-LGM range expansion and limited mid-future climate threats? PLoS One (2014) 0.90
Two genomic regions contribute disproportionately to geographic differentiation in wild barley. G3 (Bethesda) (2014) 0.89
Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nat Genet (2016) 0.82
Development and Genetic Characterization of an Advanced Backcross-Nested Association Mapping (AB-NAM) Population of Wild × Cultivated Barley. Genetics (2016) 0.81
Farmers without borders-genetic structuring in century old barley (Hordeum vulgare). Heredity (Edinb) (2014) 0.79
Wheat in the Mediterranean revisited--tetraploid wheat landraces assessed with elite bread wheat Single Nucleotide Polymorphism markers. BMC Genet (2014) 0.78
Genetic diversity and population structure in a legacy collection of spring barley landraces adapted to a wide range of climates. PLoS One (2014) 0.77
Genetic divergence in domesticated and non-domesticated gene regions of barley chromosomes. PLoS One (2015) 0.76
Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nat Genet (2016) 0.76
Geographical distribution of genetic diversity in Secale landrace and wild accessions. BMC Plant Biol (2016) 0.76
Geography of Genetic Structure in Barley Wild Relative Hordeum vulgare subsp. spontaneum in Jordan. PLoS One (2016) 0.75
The potential of pale flax as a source of useful genetic variation for cultivated flax revealed through molecular diversity and association analyses. Mol Breed (2014) 0.75
In situ conservation-harnessing natural and human-derived evolutionary forces to ensure future crop adaptation. Evol Appl (2017) 0.75
Genome sequence and analysis of the tuber crop potato. Nature (2011) 7.77
A physical, genetic and functional sequence assembly of the barley genome. Nature (2012) 7.25
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics (2009) 4.23
Agriculture: Feeding the future. Nature (2013) 3.75
Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell (2011) 3.03
Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties. Proc Natl Acad Sci U S A (2006) 2.90
Construction of a 10,000-marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genomewide physical map. Genetics (2006) 2.89
A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.). Plant J (2004) 2.77
A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping. Proc Natl Acad Sci U S A (2005) 2.60
Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley. Nat Genet (2012) 2.34
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Mol Genet Genomics (2005) 2.16
Single-feature polymorphism discovery in the barley transcriptome. Genome Biol (2005) 2.15
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant J (2013) 2.02
Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome. Proc Natl Acad Sci U S A (2010) 1.96
Cereal breeding takes a walk on the wild side. Trends Genet (2007) 1.88
Gene expression quantitative trait locus analysis of 16 000 barley genes reveals a complex pattern of genome-wide transcriptional regulation. Plant J (2007) 1.86
An atlas of gene expression from seed to seed through barley development. Funct Integr Genomics (2006) 1.79
Reconstruction of monocotelydoneous proto-chromosomes reveals faster evolution in plants than in animals. Proc Natl Acad Sci U S A (2009) 1.71
INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nat Genet (2011) 1.63
Genetic dissection of barley morphology and development. Plant Physiol (2010) 1.61
A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome. Genome (2004) 1.61
The international barley sequencing consortium--at the threshold of efficient access to the barley genome. Plant Physiol (2009) 1.55
Highly parallel gene-to-BAC addressing using microarrays. Biotechniques (2011) 1.52
Flapjack--graphical genotype visualization. Bioinformatics (2010) 1.52
Toward a marker-dense meiotic map of the potato genome: lessons from linkage group I. Genetics (2003) 1.50
Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. J Exp Bot (2009) 1.49
A barley cultivation-associated polymorphism conveys resistance to powdery mildew. Nature (2004) 1.46
Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3 (Bethesda) (2013) 1.42
Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proc Natl Acad Sci U S A (2012) 1.37
The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. BMC Evol Biol (2010) 1.35
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant J (2013) 1.34
QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum). Theor Appl Genet (2007) 1.27
Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evol Biol (2009) 1.19
Comparative transcriptomics in the Triticeae. BMC Genomics (2009) 1.19
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiol (2013) 1.17
Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theor Appl Genet (2011) 1.17
Gene-based sequence diversity analysis of field pea (Pisum). Genetics (2007) 1.10
Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theor Appl Genet (2010) 1.07
Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis. Theor Appl Genet (2008) 1.06
Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in pisum species. Genetics (2005) 1.06
Genetically engineered stem rust resistance in barley using the Rpg1 gene. Proc Natl Acad Sci U S A (2002) 1.03
Spatiotemporal asymmetry of the meiotic program underlies the predominantly distal distribution of meiotic crossovers in barley. Plant Cell (2012) 1.03
HAPPY mapping in a plant genome: reconstruction and analysis of a high-resolution physical map of a 1.9 Mbp region of Arabidopsis thaliana chromosome 4. Plant Biotechnol J (2003) 1.01
GERMINATE. a generic database for integrating genotypic and phenotypic information for plant genetic resource collections. Plant Physiol (2005) 1.00
Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Mol Plant Pathol (2005) 1.00
Sample sequencing of a selected region of the genome of Erwinia carotovora subsp. atroseptica reveals candidate phytopathogenicity genes and allows comparison with Escherichia coli. Microbiology (2002) 1.00
The application of LTR retrotransposons as molecular markers in plants. Methods Mol Biol (2004) 0.99
Barley: a translational model for adaptation to climate change. New Phytol (2015) 0.98
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 - 31 May 2010. Mol Ecol Resour (2010) 0.97
Direct targeting and rapid isolation of BAC clones spanning a defined chromosome region. Funct Integr Genomics (2005) 0.97
Retrotransposon populations of Vicia species with varying genome size. Mol Genet Genomics (2005) 0.97
Expression quantitative trait loci analysis in plants. Plant Biotechnol J (2010) 0.96
Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics (2013) 0.96
An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One (2010) 0.96
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theor Appl Genet (2008) 0.96
Population structure and linkage disequilibrium in elite barley breeding germplasm from the United States. J Zhejiang Univ Sci B (2012) 0.95
High-Resolution Genotyping of Wild Barley Introgression Lines and Fine-Mapping of the Threshability Locus thresh-1 Using the Illumina GoldenGate Assay. G3 (Bethesda) (2011) 0.95
Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. Proc Natl Acad Sci U S A (2013) 0.95
Quantitative and qualitative stem rust resistance factors in barley are associated with transcriptional suppression of defense regulons. PLoS Genet (2011) 0.95
Genetic diversity analysis in Vicia species using retrotransposon-based SSAP markers. Mol Genet Genomics (2007) 0.94
A detailed linkage map of lettuce based on SSAP, AFLP and NBS markers. Theor Appl Genet (2005) 0.94
Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics (2010) 0.94
Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics (2008) 0.94
A comparative analysis of transcript abundance using SAGE and Affymetrix arrays. Funct Integr Genomics (2005) 0.93
Genetic diversity and association analysis for salinity tolerance, heading date and plant height of barley germplasm using simple sequence repeat markers. J Integr Plant Biol (2008) 0.93
The tagged microarray marker (TAM) method for high-throughput detection of single nucleotide and indel polymorphisms. Nat Protoc (2007) 0.93
Tissue-dependent limited pleiotropy affects gene expression in barley. Plant J (2008) 0.93
Combining genetical genomics and bulked segregant analysis-based differential expression: an approach to gene localization. Theor Appl Genet (2011) 0.92
Differential Selection on Rhynchosporium secalis During Parasitic and Saprophytic Phases in the Barley Scald Disease Cycle. Phytopathology (2006) 0.91
A microarray-based high throughput molecular marker genotyping method: the tagged microarray marker (TAM) approach. Nucleic Acids Res (2003) 0.91
Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork. BMC Genet (2008) 0.91
A hAT superfamily transposase recruited by the cereal grass genome. Mol Genet Genomics (2006) 0.91
Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome. Mol Genet Genomics (2008) 0.91
High resolution mapping of Dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H. Theor Appl Genet (2011) 0.89
A genome wide association scan for (1,3;1,4)-β-glucan content in the grain of contemporary 2-row Spring and Winter barleys. BMC Genomics (2014) 0.89
Sequence-specific amplification polymorphisms (SSAPs): a multi-locus approach for analyzing transposon insertions. Nat Protoc (2006) 0.89
Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]. BMC Plant Biol (2012) 0.88
A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot. J Exp Bot (2014) 0.88
Barley necrotic locus nec1 encodes the cyclic nucleotide-gated ion channel 4 homologous to the Arabidopsis HLM1. Mol Genet Genomics (2005) 0.87
Parallel expression profiling of barley-stem rust interactions. Funct Integr Genomics (2008) 0.87
Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping. Theor Appl Genet (2012) 0.86
Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling. Biotechnol Biofuels (2013) 0.86
A cation/proton-exchanging protein is a candidate for the barley NecS1 gene controlling necrosis and enhanced defense response to stem rust. Theor Appl Genet (2008) 0.86
Asymmetric allele-specific expression in relation to developmental variation and drought stress in barley hybrids. Plant J (2009) 0.85
Differential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley. BMC Genomics (2010) 0.85
Robust detection and genotyping of single feature polymorphisms from gene expression data. PLoS Comput Biol (2009) 0.84
Exploiting induced variation to dissect quantitative traits in barley. Biochem Soc Trans (2010) 0.84
The low-recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. Plant J (2014) 0.84